Miyakogusa Predicted Gene
- Lj1g3v4764220.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4764220.1 tr|O82460|O82460_LOTJA Rac GTPase activating
protein 3 (Fragment) OS=Lotus japonicus PE=2 SV=1,99.77,0,GTPase
activation domain, GAP,Rho GTPase activation protein;
CRIB,PAK-box/P21-Rho-binding; RHOGAP,Rh,CUFF.33273.1
(1380 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC57167 UniRef100_O82460 Cluster: Rac GTPase activating... 2736 0.0
gnl|LJGI|TC76589 similar to UniRef100_O82460 Cluster: Rac GTPase... 484 e-136
gnl|LJGI|TC71983 similar to UniRef100_O82460 Cluster: Rac GTPase... 373 e-102
gnl|LJGI|TC78169 similar to UniRef100_O82460 Cluster: Rac GTPase... 210 2e-53
gnl|LJGI|TC58702 UniRef100_O82458 Cluster: Rac GTPase activating... 54 2e-06
gnl|LJGI|TC68892 similar to UniRef100_A7PPC2 Cluster: Chromosome... 52 9e-06
gnl|LJGI|TC65150 UniRef100_O82459 Cluster: Rac GTPase activating... 52 9e-06
>gnl|LJGI|TC57167 UniRef100_O82460 Cluster: Rac GTPase activating protein 3; n=1; Lotus
japonicus|Rep: Rac GTPase activating protein 3 - Lotus
japonicus, complete
Length = 1805
Score = 2736 bits (1380), Expect = 0.0
Identities = 1380/1380 (100%)
Strand = Plus / Plus
Query: 1 atgacagggccagtgatggtgacaaggggtggaggatgcggtggtgggaagggaaggaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88 atgacagggccagtgatggtgacaaggggtggaggatgcggtggtgggaagggaaggaga 147
Query: 61 ggaggcagagacgccgtcgaagaagcagagcagaaccaggggtcgccggcggcgttttta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 ggaggcagagacgccgtcgaagaagcagagcagaaccaggggtcgccggcggcgttttta 207
Query: 121 ttggcggctctgaagaaatctatggtggcgtgcagtgtcgacagtcctgatgatgtcatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 ttggcggctctgaagaaatctatggtggcgtgcagtgtcgacagtcctgatgatgtcatc 267
Query: 181 tccgccgtgcatcccatggagattggatggcctaccaacgttaagcacgtcactcacgtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 tccgccgtgcatcccatggagattggatggcctaccaacgttaagcacgtcactcacgtc 327
Query: 241 accttcgatcgcttcaatggcttcctgggtcttcctcttgagttagaggttcatgtacct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 accttcgatcgcttcaatggcttcctgggtcttcctcttgagttagaggttcatgtacct 387
Query: 301 gctcctgttcccagtgctagtgttagtgtgtttggcgtctcagctgaatcaatgcagtgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 gctcctgttcccagtgctagtgttagtgtgtttggcgtctcagctgaatcaatgcagtgt 447
Query: 361 tcttatgattcaaagggaaacagtgtccccactattctgctgctaatgcaggagcggtta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 tcttatgattcaaagggaaacagtgtccccactattctgctgctaatgcaggagcggtta 507
Query: 421 tactcacaggggggccttatggctgaaggtatattccgcataaacccggagaacggtcaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 tactcacaggggggccttatggctgaaggtatattccgcataaacccggagaacggtcaa 567
Query: 481 gaggagcatttgagggaccagttgaataggggcgttgtgccggataacattgatgtccat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 gaggagcatttgagggaccagttgaataggggcgttgtgccggataacattgatgtccat 627
Query: 541 tgcttggcagggctaattaaagcatggttcagagagcttccttctggagtgcttgatgga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 tgcttggcagggctaattaaagcatggttcagagagcttccttctggagtgcttgatgga 687
Query: 601 ctttctcctgaacaagttcttgagtgcaacacagaagaagaatttgttcagcttgtgaag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 ctttctcctgaacaagttcttgagtgcaacacagaagaagaatttgttcagcttgtgaag 747
Query: 661 cagctcaagccaactgagttagccttacttaactgggctcttgatctcatggctgatgtt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 cagctcaagccaactgagttagccttacttaactgggctcttgatctcatggctgatgtt 807
Query: 721 gtggaagaagaggagcataacaaaatggatgctaggaatatagcaatggtttttgctcca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 808 gtggaagaagaggagcataacaaaatggatgctaggaatatagcaatggtttttgctcca 867
Query: 781 aatatgactcagatgtctgatccactaactgctctgatgcacgcggtccaagtaatgaat 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 868 aatatgactcagatgtctgatccactaactgctctgatgcacgcggtccaagtaatgaat 927
Query: 841 ttactgaagaccctgatactgaagacacttagtgaacgtgaagaagcaacaacagcaggg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 928 ttactgaagaccctgatactgaagacacttagtgaacgtgaagaagcaacaacagcaggg 987
Query: 901 tattcatccatgtcatctcattcatcagatcgccaatctgaggatgaatatgatagtcag 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 988 tattcatccatgtcatctcattcatcagatcgccaatctgaggatgaatatgatagtcag 1047
Query: 961 cttgaaatgtataccagtgctgaattgagagggagccagtcagattgtgatgatcatgtt 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1048 cttgaaatgtataccagtgctgaattgagagggagccagtcagattgtgatgatcatgtt 1107
Query: 1021 aacaataatagccttaacagtgaagaggaagtggattctgcgtctgtaagtgagatagag 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1108 aacaataatagccttaacagtgaagaggaagtggattctgcgtctgtaagtgagatagag 1167
Query: 1081 gaatgcttcttgaagcagttgaatgagaacaaacaaggaggattcgcagaggaacctgca 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1168 gaatgcttcttgaagcagttgaatgagaacaaacaaggaggattcgcagaggaacctgca 1227
Query: 1141 aggagtacttgctctggctataacctggaatctgctgtatcatttaccgatgcgaaacct 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1228 aggagtacttgctctggctataacctggaatctgctgtatcatttaccgatgcgaaacct 1287
Query: 1201 gataattcgtgctcaagttcttatgaagatgactcgggagcaactctgtcggctgaggga 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1288 gataattcgtgctcaagttcttatgaagatgactcgggagcaactctgtcggctgaggga 1347
Query: 1261 tcgagtgcggaatcaagtagtccatcaattggaagtacatactgcaccaatgatgtggaa 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1348 tcgagtgcggaatcaagtagtccatcaattggaagtacatactgcaccaatgatgtggaa 1407
Query: 1321 atgatggataagtttgcagattgtgtttcactagtgccactgtttgcatcaagttaagaa 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1408 atgatggataagtttgcagattgtgtttcactagtgccactgtttgcatcaagttaagaa 1467
>gnl|LJGI|TC76589 similar to UniRef100_O82460 Cluster: Rac GTPase activating protein
3; n=1; Lotus japonicus|Rep: Rac GTPase activating
protein 3 - Lotus japonicus, partial (50%)
Length = 913
Score = 484 bits (244), Expect = e-136
Identities = 511/600 (85%)
Strand = Plus / Plus
Query: 135 gaaatctatggtggcgtgcagtgtcgacagtcctgatgatgtcatctccgccgtgcatcc 194
|||||| |||||||| ||||| |||||| | || ||||| | |||||| | || || |
Sbjct: 309 gaaatccatggtggcttgcagagtcgaccgacccgatgaagcgatctccacagttcacca 368
Query: 195 catggagattggatggcctaccaacgttaagcacgtcactcacgtcaccttcgatcgctt 254
|||||||| |||||||||||| ||||| ||||| ||||||| |||||||||||||||||
Sbjct: 369 aatggagatcggatggcctaccgacgttcagcacatcactcatgtcaccttcgatcgctt 428
Query: 255 caatggcttcctgggtcttcctcttgagttagaggttcatgtacctgctcctgttcccag 314
|||||||||||||||||||||| ||||||| |||||| | | || | || ||||||||
Sbjct: 429 caatggcttcctgggtcttcctgttgagtttgaggttgagatcccgggtcgggttcccag 488
Query: 315 tgctagtgttagtgtgtttggcgtctcagctgaatcaatgcagtgttcttatgattcaaa 374
||||||||| ||||| ||||||||||| || ||||| |||||||||||||||||||||||
Sbjct: 489 tgctagtgtaagtgtatttggcgtctctgcagaatctatgcagtgttcttatgattcaaa 548
Query: 375 gggaaacagtgtccccactattctgctgctaatgcaggagcggttatactcacagggggg 434
|| ||||||||||| || ||||| | ||||||||||| || |||||||| ||||| ||
Sbjct: 549 agggaacagtgtccctacaattctcttactaatgcaggaacgtttatactcccagggagg 608
Query: 435 ccttatggctgaaggtatattccgcataaacccggagaacggtcaagaggagcatttgag 494
| | | ||||||||| ||||| ||||||||||| || || |||||||||||||| ||||
Sbjct: 609 cttaaaggctgaaggaatatttcgcataaacccagaaaatagtcaagaggagcatgtgag 668
Query: 495 ggaccagttgaataggggcgttgtgccggataacattgatgtccattgcttggcagggct 554
| ||||||||||||| ||| ||||||| ||| ||||||||||||| |||||||| || ||
Sbjct: 669 gaaccagttgaatagaggcattgtgccagatgacattgatgtccactgcttggcgggact 728
Query: 555 aattaaagcatggttcagagagcttccttctggagtgcttgatggactttctcctgaaca 614
||||||||| |||||| ||||||||||| |||||||| ||||||||||| ||||||||
Sbjct: 729 aattaaagcctggttccgagagcttcctcaaggagtgctggatggactttcccctgaaca 788
Query: 615 agttcttgagtgcaacacagaagaagaatttgttcagcttgtgaagcagctcaagccaac 674
|||||| |||| ||||| |||||||||| | | |||||||||||||||| ||||||||
Sbjct: 789 agttctgcagtgtaacaccgaagaagaatctatcgagcttgtgaagcagctgaagccaac 848
Query: 675 tgagttagccttacttaactgggctcttgatctcatggctgatgttgtggaagaagagga 734
||| |||||||| ||||||||| ||||||||||||| |||||||| ||||| |||||
Sbjct: 849 cgagactgccttactcaactgggctattgatctcatggccgatgttgtagaagatgagga 908
>gnl|LJGI|TC71983 similar to UniRef100_O82460 Cluster: Rac GTPase activating protein
3; n=1; Lotus japonicus|Rep: Rac GTPase activating
protein 3 - Lotus japonicus, partial (39%)
Length = 714
Score = 373 bits (188), Expect = e-102
Identities = 398/468 (85%)
Strand = Plus / Plus
Query: 135 gaaatctatggtggcgtgcagtgtcgacagtcctgatgatgtcatctccgccgtgcatcc 194
|||||| |||||||| ||||| |||||| | || ||||| | |||||| | || || |
Sbjct: 247 gaaatccatggtggcttgcagagtcgaccgacccgatgaagcgatctccacagttcacca 306
Query: 195 catggagattggatggcctaccaacgttaagcacgtcactcacgtcaccttcgatcgctt 254
|||||||| |||||||||||| ||||| ||||| ||||||| |||||||||||||||||
Sbjct: 307 aatggagatcggatggcctaccgacgttcagcacatcactcatgtcaccttcgatcgctt 366
Query: 255 caatggcttcctgggtcttcctcttgagttagaggttcatgtacctgctcctgttcccag 314
|||||||||||||||||||||| ||||||| |||||| | | || | || ||||||||
Sbjct: 367 caatggcttcctgggtcttcctgttgagtttgaggttgagatcccgggtcgggttcccag 426
Query: 315 tgctagtgttagtgtgtttggcgtctcagctgaatcaatgcagtgttcttatgattcaaa 374
||||||||| ||||| ||||||||||| || ||||| |||||||||||||||||||||||
Sbjct: 427 tgctagtgtaagtgtatttggcgtctctgcagaatctatgcagtgttcttatgattcaaa 486
Query: 375 gggaaacagtgtccccactattctgctgctaatgcaggagcggttatactcacagggggg 434
|| ||||||||||| || ||||| | ||||||||||| || |||||||| ||||| ||
Sbjct: 487 agggaacagtgtccctacaattctcttactaatgcaggaacgtttatactcccagggagg 546
Query: 435 ccttatggctgaaggtatattccgcataaacccggagaacggtcaagaggagcatttgag 494
| | | ||||||||| ||||| ||||||||||| || || |||||||||||||| ||||
Sbjct: 547 cttaaaggctgaaggaatatttcgcataaacccagaaaatagtcaagaggagcatgtgag 606
Query: 495 ggaccagttgaataggggcgttgtgccggataacattgatgtccattgcttggcagggct 554
| ||||||||||||| ||| ||||||| ||| ||||||||||||| |||||||| || ||
Sbjct: 607 gaaccagttgaatagaggcattgtgccagatgacattgatgtccactgcttggcgggact 666
Query: 555 aattaaagcatggttcagagagcttccttctggagtgcttgatggact 602
||||||||| |||||| ||||||||||| |||||||| ||||||||
Sbjct: 667 aattaaagcctggttccgagagcttcctcaaggagtgctggatggact 714
>gnl|LJGI|TC78169 similar to UniRef100_O82460 Cluster: Rac GTPase activating protein
3; n=1; Lotus japonicus|Rep: Rac GTPase activating
protein 3 - Lotus japonicus, partial (23%)
Length = 797
Score = 210 bits (106), Expect = 2e-53
Identities = 217/254 (85%)
Strand = Plus / Plus
Query: 708 catggctgatgttgtggaagaagaggagcataacaaaatggatgctaggaatatagcaat 767
|||||| |||||||| ||||| ||||| |||||||||| | || || || || |||||
Sbjct: 1 catggccgatgttgtagaagatgaggaatgtaacaaaatgaacgcaagaaacattgcaat 60
Query: 768 ggtttttgctccaaatatgactcagatgtctgatccactaactgctctgatgcacgcggt 827
||||||||||||||| |||||||||||||||||||| ||||| || |||||||| |||||
Sbjct: 61 ggtttttgctccaaacatgactcagatgtctgatcctctaaccgccctgatgcatgcggt 120
Query: 828 ccaagtaatgaatttactgaagaccctgatactgaagacacttagtgaacgtgaagaagc 887
||||| ||||| ||||| ||||| ||||| ||||||||||||| |||||||||||| |
Sbjct: 121 tcaagtgatgaacttactcaagacattgataatgaagacacttagagaacgtgaagaaac 180
Query: 888 aacaacagcagggtattcatccatgtcatctcattcatcagatcgccaatctgaggatga 947
| |||||| || |||||| ||||||| | ||||||||||||||||| ||||||| |||
Sbjct: 181 agcaacaggtggatattcacccatgtcctttcattcatcagatcgccggtctgaggctga 240
Query: 948 atatgatagtcagc 961
|||||| |||||||
Sbjct: 241 atatgacagtcagc 254
Score = 58.0 bits (29), Expect = 2e-07
Identities = 65/77 (84%)
Strand = Plus / Plus
Query: 1304 gcaccaatgatgtggaaatgatggataagtttgcagattgtgtttcactagtgccactgt 1363
||||||| || ||||| ||||||||||| ||| |||||| ||| ||| |||||| |||
Sbjct: 564 gcaccaaagaagtggagatgatggataaatttacagattcggttccaccagtgccgctgg 623
Query: 1364 ttgcatcaagttaagaa 1380
||||||| |||||||||
Sbjct: 624 ttgcatctagttaagaa 640
>gnl|LJGI|TC58702 UniRef100_O82458 Cluster: Rac GTPase activating protein 1; n=1; Lotus
japonicus|Rep: Rac GTPase activating protein 1 - Lotus
japonicus, complete
Length = 2109
Score = 54.0 bits (27), Expect = 2e-06
Identities = 78/95 (82%)
Strand = Plus / Plus
Query: 757 aatatagcaatggtttttgctccaaatatgactcagatgtctgatccactaactgctctg 816
||||| |||||||||||||| ||||| |||||||| ||| | ||||| | |||||| ||
Sbjct: 1097 aatattgcaatggtttttgcaccaaacatgactcatatggccgatcctttgactgctttg 1156
Query: 817 atgcacgcggtccaagtaatgaatttactgaagac 851
||| | || || ||||| |||||||| || |||||
Sbjct: 1157 atgtatgcagtacaagtcatgaattttctcaagac 1191
>gnl|LJGI|TC68892 similar to UniRef100_A7PPC2 Cluster: Chromosome chr8 scaffold_23,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_23, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (34%)
Length = 1002
Score = 52.0 bits (26), Expect = 9e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 766 atggtttttgctccaaatatgactcagatg 795
||||||||||| ||||||||||||||||||
Sbjct: 243 atggtttttgcaccaaatatgactcagatg 272
>gnl|LJGI|TC65150 UniRef100_O82459 Cluster: Rac GTPase activating protein 2; n=1;
Lotus japonicus|Rep: Rac GTPase activating protein 2 -
Lotus japonicus, complete
Length = 1998
Score = 52.0 bits (26), Expect = 9e-06
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 349 tcaatgcagtgttcttatgattcaaagggaaacagtgtccccactattctgctg 402
||||||||||| ||||||||| || ||| ||||||||||| || |||||||||
Sbjct: 763 tcaatgcagtgctcttatgatgaaagggggaacagtgtcccaaccattctgctg 816