Miyakogusa Predicted Gene

Lj1g3v4764160.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v4764160.1 Non Chatacterized Hit- tr|G8A1B1|G8A1B1_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,82.54,0,PORR,Plant organelle RNA recognition domain;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL; seg,NU,CUFF.33173.1
         (1237 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC78082 similar to UniRef100_A6ZRG2 Cluster: Cell wall ...   303   1e-81

>gnl|LJGI|TC78082 similar to UniRef100_A6ZRG2 Cluster: Cell wall integrity and stress
            response component; n=1; Saccharomyces cerevisiae
            YJM789|Rep: Cell wall integrity and stress response
            component - Saccharomyces cerevisiae (strain YJM789)
            (Baker's yeast), partial (5%)
          Length = 492

 Score =  303 bits (153), Expect = 1e-81
 Identities = 159/161 (98%)
 Strand = Plus / Minus

                                                                        
Query: 1077 gaagacggggcttctttatcgcggtgatggctcaatccccaaacctgagggtggtgcttt 1136
            |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 492  gaagacggggcttctttatcgcggtgatggctcaatccccaaccttgagggtggtgcttt 433

                                                                        
Query: 1137 gctgcttgatgaaataggggatgagggttctgaggaggaagaggttgaaacaagtgatga 1196
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432  gctgcttgatgaaataggggatgagggttctgaggaggaagaggttgaaacaagtgatga 373

                                                     
Query: 1197 attctccgagggtgaagtttcagggtcggatagtgaatgag 1237
            |||||||||||||||||||||||||||||||||||||||||
Sbjct: 372  attctccgagggtgaagtttcagggtcggatagtgaatgag 332