Miyakogusa Predicted Gene

Lj1g3v4763880.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v4763880.1 Non Chatacterized Hit- tr|I1JQE3|I1JQE3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.30280
PE,81.61,0,MMS1_N,NULL; CPSF_A,Cleavage/polyadenylation specificity
factor, A subunit, C-terminal; SPLICING FAC,CUFF.33168.1
         (3990 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|DC593113 weakly similar to UniRef100_A7PW25 Cluster: Ch...   543   e-153
gnl|LJGI|TC78591                                                       98   5e-19

>gnl|LJGI|DC593113 weakly similar to UniRef100_A7PW25 Cluster: Chromosome chr8
           scaffold_34, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr8 scaffold_34, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (4%)
          Length = 490

 Score =  543 bits (274), Expect = e-153
 Identities = 274/274 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcggtttccgaagaagaatgctcttccaccaagcccggtccatcttcctcttcttct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 atggcggtttccgaagaagaatgctcttccaccaagcccggtccatcttcctcttcttct 276

                                                                       
Query: 61  tccacctctcgctactacctctcaaagtccctcctccgaccaggcgccattctccacgtc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 tccacctctcgctactacctctcaaagtccctcctccgaccaggcgccattctccacgtc 336

                                                                       
Query: 121 ctctacgctcatatccgctctccctcctccaacgacatcgttttcgccaaggagacatct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 ctctacgctcatatccgctctccctcctccaacgacatcgttttcgccaaggagacatct 396

                                                                       
Query: 181 atagagttggtggttattggtgaggatgggaatgttctaactctcagtgatcagcctgtt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 atagagttggtggttattggtgaggatgggaatgttctaactctcagtgatcagcctgtt 456

                                             
Query: 241 tttggcaccattaaagatcttgctgtattgccct 274
           ||||||||||||||||||||||||||||||||||
Sbjct: 457 tttggcaccattaaagatcttgctgtattgccct 490


>gnl|LJGI|TC78591 
          Length = 599

 Score = 97.6 bits (49), Expect = 5e-19
 Identities = 49/49 (100%)
 Strand = Plus / Plus

                                                             
Query: 3942 gtttctagagttaacaagtatgcagcaaaatacaatattgtcttcagag 3990
            |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    gtttctagagttaacaagtatgcagcaaaatacaatattgtcttcagag 49