Miyakogusa Predicted Gene
- Lj1g3v4763870.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4763870.1 Non Chatacterized Hit- tr|B8AWC4|B8AWC4_ORYSI
Putative uncharacterized protein OS=Oryza sativa
subsp,47.42,0.00000000000002,TRAF domain-like,TRAF-like; seg,NULL;
ZF_TRAF,Zinc finger, TRAF-type; TNF RECEPTOR ASSOCIATED
FACTOR,CUFF.33167.1
(1623 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC78842 similar to UniRef100_A7PW27 Cluster: Chromosome... 337 1e-91
>gnl|LJGI|TC78842 similar to UniRef100_A7PW27 Cluster: Chromosome chr8 scaffold_34,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_34, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (57%)
Length = 1016
Score = 337 bits (170), Expect = 1e-91
Identities = 548/674 (81%)
Strand = Plus / Plus
Query: 369 aaagaggaatttgtttagccgggtttcgggatggttgctgagtgagaagagagaggacaa 428
|||||||||||||||||| |||||| || ||| | || || || |||||||| |||||
Sbjct: 6 aaagaggaatttgtttagtaaggtttcagggtggctcctaagcgacaagagagaagacaa 65
Query: 429 gatagacgattttgttcaggagatggaaatgaaaggcttttggacacttgatagaaggga 488
|||||| |||||||| |||||||| |||||||| || |||||| | || |||||||| ||
Sbjct: 66 gatagatgattttgtgcaggagatagaaatgaatggtttttggtcgctagatagaagaga 125
Query: 489 aaccattgcagaaactttgcttaagaatgtggactttgagaactcgtttcattgcagcat 548
||| || ||||||||||||||||||||||| ||||| |||||| ||||||||||||||
Sbjct: 126 aacgatagcagaaactttgcttaagaatgttgacttcaagaacttatttcattgcagcat 185
Query: 549 gaattttaactctaaggaagagcttgccagtcatgttactggctgcaactttagaaccat 608
||| ||||| || ||||| ||||||| ||| | |||||||| | | | ||
Sbjct: 186 gaaatttaattcagctgaagatcttgccaaacatactgagaagtgcaacttcaaacctat 245
Query: 609 gatttgccaaaatgaggggtgcaattcaagattttgtgcaggtcatttgaagaagcatga 668
||| ||||| |||||||| || ||| |||||| | || ||||||||||| |||||||
Sbjct: 246 gatctgccagaatgagggatgtaataacagatttagcacacgtcatttgaaggagcatga 305
Query: 669 ttcaacatgtcctttcaagataattcaatgtgaacagaaatgttcagataacatcatgag 728
|||||| ||||||||||||||||||| ||||||||||||||| | |||| | | |||||
Sbjct: 306 ttcaacttgtcctttcaagataattccctgtgaacagaaatgtaccgatagcttaatgag 365
Query: 729 acgggatatggacaggcactgtataactgtttgtccaatgaagcttgtaaattgtccttt 788
|| | |||||||||||||| ||||||| ||||||||||||||||| |||||||||||
Sbjct: 366 gcgtcagatggacaggcactgcataactgaatgtccaatgaagcttgtgaattgtccttt 425
Query: 789 ctttgcagtgggttgccgatcagcggttgcgcaatgtatgatcgaaaaacatttttcgga 848
|| | ||||||| || ||||| || | | ||||||||||| |||||||||| | | ||
Sbjct: 426 ctattcagtggggtgtcgatctgctatctcacaatgtatgattgaaaaacattgtgcaga 485
Query: 849 tgatattcgttctcacttgtggcacttgcttaaaggcatccacaaggaagcatctgggga 908
||| ||| ||||||||| | |||| | ||||||||||| || | |||||||||||| ||
Sbjct: 486 tgaccttcattctcacttattgcacatccttaaaggcatacatagggaagcatctggtga 545
Query: 909 agatcttaaacgacgagtggaccaaattgtagaggcatcatcaagcagccaattagcaaa 968
|||||||||| ||||||| || ||||||||| ||||||||||||||||| |||||| |
Sbjct: 546 agatcttaaaagacgagtagagcaaattgtacaggcatcatcaagcagcagtttagcaga 605
Query: 969 ggctcgagatgttagatctttaaccttcgttgtcaaggatattgaagctaagctagggcc 1028
|||| || || |||||||||| | ||||| | | | |||||||||||||| ||
Sbjct: 606 ggctaaggaagtgagatctttaaaaaatatcgtcaaagctctggaagctaagctaggacc 665
Query: 1029 tttggaagtgagtg 1042
||||||||||||||
Sbjct: 666 tttggaagtgagtg 679