Miyakogusa Predicted Gene
- Lj1g3v4763840.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4763840.1 Non Chatacterized Hit- tr|I1K5D3|I1K5D3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.41618
PE,88.33,0,seg,NULL; EUKARYOTIC TRANSLATION INITATION FACTOR 3,
SUBUNIT 8 (EIF3S8)-RELATED,NULL; eIF-3c_N,Eukar,CUFF.33186.1
(1675 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|AV408619 similar to UniRef100_Q1SL20 Cluster: Proteasom... 846 0.0
gnl|LJGI|TC73404 similar to UniRef100_Q1SL20 Cluster: Proteasome... 321 8e-87
gnl|LJGI|GO012400 homologue to UniRef100_A7QTW3 Cluster: Chromos... 264 2e-69
>gnl|LJGI|AV408619 similar to UniRef100_Q1SL20 Cluster: Proteasome component region PCI;
Eukaryotic translation initiation factor 3 subunit 8,
C-terminal; Eukaryotic translation initiation factor 3
subunit 8, N-terminal; n=1; Medicago truncatula|Rep:
Proteasome component region PCI; Eukaryotic translation
initiation factor 3 subunit 8, C-terminal; Eukaryotic
translation initiation factor 3 subunit 8, N-terminal -
Medicago truncatula (Barrel medic), partial (15%)
Length = 427
Score = 846 bits (427), Expect = 0.0
Identities = 427/427 (100%)
Strand = Plus / Plus
Query: 670 gaaattcttttcagtgtggtctctgctcagtttgatgttaatccaggcctcaatgggcat 729
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaaattcttttcagtgtggtctctgctcagtttgatgttaatccaggcctcaatgggcat 60
Query: 730 atgcccataaatgtgtggaagaaatgtgttcacaatatgctgatcattctggatgttcta 789
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atgcccataaatgtgtggaagaaatgtgttcacaatatgctgatcattctggatgttcta 120
Query: 790 gtacagtatccaaacataatggttgatgattcagtggagctagatgaggctgaaactcag 849
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtacagtatccaaacataatggttgatgattcagtggagctagatgaggctgaaactcag 180
Query: 850 aaagggtctgactatgatgggcctattcgggtttggggtaacttagttgctttcctagaa 909
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aaagggtctgactatgatgggcctattcgggtttggggtaacttagttgctttcctagaa 240
Query: 910 agaatagatgccgagtttttcaagagcctgcaatgcatagatcctcatacgcgtgagtat 969
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agaatagatgccgagtttttcaagagcctgcaatgcatagatcctcatacgcgtgagtat 300
Query: 970 gttgagagactcagggatgaacccttgtttttggttcttgctcagaatgtccaggagtat 1029
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gttgagagactcagggatgaacccttgtttttggttcttgctcagaatgtccaggagtat 360
Query: 1030 cttgaaaggactggcgatttcaaagctgcttctaaggtggccttgaggagggttgaactc 1089
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cttgaaaggactggcgatttcaaagctgcttctaaggtggccttgaggagggttgaactc 420
Query: 1090 gtttact 1096
|||||||
Sbjct: 421 gtttact 427
>gnl|LJGI|TC73404 similar to UniRef100_Q1SL20 Cluster: Proteasome component region
PCI; Eukaryotic translation initiation factor 3 subunit
8, C-terminal; Eukaryotic translation initiation factor
3 subunit 8, N-terminal; n=1; Medicago truncatula|Rep:
Proteasome component region PCI; Eukaryotic translation
initiation factor 3 subunit 8, C-terminal; Eukaryotic
translation initiation factor 3 subunit 8, N-terminal -
Medicago truncatula (Barrel medic), partial (12%)
Length = 607
Score = 321 bits (162), Expect = 8e-87
Identities = 252/282 (89%)
Strand = Plus / Plus
Query: 1 atggcggccactgtcgaccaaatgaagaatgccatgaagatcaatgactgggtcagcctg 60
|||||||||||||||||||| ||||||||||| | || || ||||||||||| || |||
Sbjct: 326 atggcggccactgtcgaccagatgaagaatgctgtcaaaattaatgactgggtgagtctg 385
Query: 61 caagagagctttgacaagatcaacaagcagcttgagaaggttatgcgcgtcactgagtct 120
|||||||||||||||||||| |||||||||||||||||||| ||||| ||||| | ||||
Sbjct: 386 caagagagctttgacaagattaacaagcagcttgagaaggtcatgcgtgtcaccgggtct 445
Query: 121 gaaaaggtgcccaagctttacatcaaggcacttgtgatgctggaggatttccttgctcag 180
|| |||| |||| | ||||||||||||| ||||||||||||||||||||| | ||| ||
Sbjct: 446 gacaaggctcccaggatttacatcaaggctcttgtgatgctggaggatttcttggctgag 505
Query: 181 gctttggcgaataaggatgctaagaagaagatgagtagcagcaatgccaaggcgctgaac 240
|||||||||||||||||||| ||||||||||||||||| ||||||||||| || |||||
Sbjct: 506 gctttggcgaataaggatgccaagaagaagatgagtagtagcaatgccaaagccttgaac 565
Query: 241 tcgatgaagcagaaattgaagaagaataataagcagtatgag 282
| ||||||||||| |||||||||||||||||||||||||||
Sbjct: 566 gctatgaagcagaagttgaagaagaataataagcagtatgag 607
>gnl|LJGI|GO012400 homologue to UniRef100_A7QTW3 Cluster: Chromosome undetermined
scaffold_171, whole genome shotgun sequence; n=2; Vitis
vinifera|Rep: Chromosome undetermined scaffold_171,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (16%)
Length = 694
Score = 264 bits (133), Expect = 2e-69
Identities = 133/133 (100%)
Strand = Plus / Plus
Query: 166 gatttccttgctcaggctttggcgaataaggatgctaagaagaagatgagtagcagcaat 225
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 gatttccttgctcaggctttggcgaataaggatgctaagaagaagatgagtagcagcaat 451
Query: 226 gccaaggcgctgaactcgatgaagcagaaattgaagaagaataataagcagtatgaggaa 285
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 gccaaggcgctgaactcgatgaagcagaaattgaagaagaataataagcagtatgaggaa 511
Query: 286 atgattactaagc 298
|||||||||||||
Sbjct: 512 atgattactaagc 524
Score = 71.9 bits (36), Expect = 1e-11
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 351 tgaatatgaaagtgatggtgagattattgagcccga 386
||||||||||||||||||||||||||||||||||||
Sbjct: 577 tgaatatgaaagtgatggtgagattattgagcccga 612