Miyakogusa Predicted Gene
- Lj1g3v4763790.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4763790.1 Non Chatacterized Hit- tr|J0XGV8|J0XGV8_LOALO
Uncharacterized protein OS=Loa loa PE=4 SV=1,32.64,2e-17,no
description,NULL; UBA,Ubiquitin-associated/translation elongation
factor EF1B, N-terminal, eukary,CUFF.33165.1
(1209 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58179 similar to UniRef100_A7Q023 Cluster: Chromosome... 1433 0.0
gnl|LJGI|TC60523 homologue to UniRef100_Q8LB17 Cluster: Uncharac... 642 0.0
gnl|LJGI|BP076253 similar to UniRef100_A7Q023 Cluster: Chromosom... 200 1e-50
gnl|LJGI|TC73983 homologue to UniRef100_A7Q023 Cluster: Chromoso... 161 1e-38
gnl|LJGI|BP080098 similar to UniRef100_Q8LB17 Cluster: Uncharact... 147 2e-34
gnl|LJGI|TC81958 similar to UniRef100_Q8LB17 Cluster: Uncharacte... 145 7e-34
gnl|LJGI|FS335064 similar to UniRef100_A7Q023 Cluster: Chromosom... 131 1e-29
>gnl|LJGI|TC58179 similar to UniRef100_A7Q023 Cluster: Chromosome chr8 scaffold_41,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_41, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (58%)
Length = 859
Score = 1433 bits (723), Expect = 0.0
Identities = 723/723 (100%)
Strand = Plus / Plus
Query: 1 atgcgaagaccaagaaccatgagaccaaacatcgtttctgaggcaggggtgtctactagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 atgcgaagaccaagaaccatgagaccaaacatcgtttctgaggcaggggtgtctactagg 196
Query: 61 gtgaatcaatggtgggaaagcattccattcctcacttctgcagtggtggttgtgtgtgga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 gtgaatcaatggtgggaaagcattccattcctcacttctgcagtggtggttgtgtgtgga 256
Query: 121 gcaatttacttggtctgtcttttggttggatatgattcctttgctgagatatgcttcttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 gcaatttacttggtctgtcttttggttggatatgattcctttgctgagatatgcttcttg 316
Query: 181 ccttctgctgttgtgtcacgctttcaagtttacaggatttatactgccattcttttccac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 ccttctgctgttgtgtcacgctttcaagtttacaggatttatactgccattcttttccac 376
Query: 241 ggttcactgcttcatgttctcttcaacatgatggctttagttcccttgggctctgagctc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 ggttcactgcttcatgttctcttcaacatgatggctttagttcccttgggctctgagctc 436
Query: 301 gagaggattatgggctcagttcgcttgctatatgtcactattttgttggctacaagcaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 gagaggattatgggctcagttcgcttgctatatgtcactattttgttggctacaagcaat 496
Query: 361 gctatattccatgttctcatagcgctgctggtgacatacaatccttttgttaaatttgat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 gctatattccatgttctcatagcgctgctggtgacatacaatccttttgttaaatttgat 556
Query: 421 tacctcatgaatgagtgtgcgattggtttctcaggagttctattttccatgattgttata 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 tacctcatgaatgagtgtgcgattggtttctcaggagttctattttccatgattgttata 616
Query: 481 gagactagcctgagtggagttcaatccaggagtgtgtttgggttgtttaatgtgcctgcc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 gagactagcctgagtggagttcaatccaggagtgtgtttgggttgtttaatgtgcctgcc 676
Query: 541 aagtggtatgcattctttttgttggttgtattccagcttctcatgcaaaatgtctcacta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 aagtggtatgcattctttttgttggttgtattccagcttctcatgcaaaatgtctcacta 736
Query: 601 cttggacacctttgtggcattttatctgggtttgcatatacatatggcttgtttaatttc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 cttggacacctttgtggcattttatctgggtttgcatatacatatggcttgtttaatttc 796
Query: 661 ctcatacctgggacatctttttattcttccattgaagcctcttccttgctttcatcatgt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 ctcatacctgggacatctttttattcttccattgaagcctcttccttgctttcatcatgt 856
Query: 721 gta 723
|||
Sbjct: 857 gta 859
>gnl|LJGI|TC60523 homologue to UniRef100_Q8LB17 Cluster: Uncharacterized protein
At3g58460; n=1; Arabidopsis thaliana|Rep: Uncharacterized
protein At3g58460 - Arabidopsis thaliana (Mouse-ear
cress), partial (15%)
Length = 775
Score = 642 bits (324), Expect = 0.0
Identities = 324/324 (100%)
Strand = Plus / Plus
Query: 886 gacagcaggttccctggtgcgggaaggaccctcggttctagtcaaggtcaaatggcttct 945
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gacagcaggttccctggtgcgggaaggaccctcggttctagtcaaggtcaaatggcttct 60
Query: 946 ggtattcagtcaaattcaaatcttcaagctagactcttggaggatagcagtccaaatcag 1005
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggtattcagtcaaattcaaatcttcaagctagactcttggaggatagcagtccaaatcag 120
Query: 1006 ccttcagaaggaaggcatgcagttgataatgctgctacagcagctgcaggtgttccacat 1065
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ccttcagaaggaaggcatgcagttgataatgctgctacagcagctgcaggtgttccacat 180
Query: 1066 catcaggctgcagttgtttcagaggaagagattaaaaagcttgtagcaatgggctttgat 1125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 catcaggctgcagttgtttcagaggaagagattaaaaagcttgtagcaatgggctttgat 240
Query: 1126 aggacgcaggtggaagtggcactggcggctgctgatggtgatcttaacgtggcagtggaa 1185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aggacgcaggtggaagtggcactggcggctgctgatggtgatcttaacgtggcagtggaa 300
Query: 1186 atactcatgagccagcagggttga 1209
||||||||||||||||||||||||
Sbjct: 301 atactcatgagccagcagggttga 324
>gnl|LJGI|BP076253 similar to UniRef100_A7Q023 Cluster: Chromosome chr8 scaffold_41,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_41, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 415
Score = 200 bits (101), Expect = 1e-50
Identities = 110/113 (97%)
Strand = Plus / Minus
Query: 525 gtttaatgtgcctgccaagtggtatgcattctttttgttggttgtattccagcttctcat 584
||||||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||
Sbjct: 415 gtttaatgtgcctcccaagtggtattcattctttttgttggtagtattccagcttctcat 356
Query: 585 gcaaaatgtctcactacttggacacctttgtggcattttatctgggtttgcat 637
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 gcaaaatgtctcactacttggacacctttgtggcattttatctgggtttgcat 303
Score = 123 bits (62), Expect = 3e-27
Identities = 71/74 (95%)
Strand = Plus / Minus
Query: 638 atacatatggcttgtttaatttcctcatacctgggacatctttttattcttccattgaag 697
|||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||
Sbjct: 200 atacatatggcttgtttaatttcctcatacctaggacatctttttattcttccactaaag 141
Query: 698 cctcttccttgctt 711
||||||||||||||
Sbjct: 140 cctcttccttgctt 127
>gnl|LJGI|TC73983 homologue to UniRef100_A7Q023 Cluster: Chromosome chr8 scaffold_41,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_41, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (7%)
Length = 708
Score = 161 bits (81), Expect = 1e-38
Identities = 87/89 (97%)
Strand = Plus / Plus
Query: 623 tatctgggtttgcatatacatatggcttgtttaatttcctcatacctgggacatcttttt 682
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 57 tatctgggtttgcatatacatatggcttgtttaatttcctcatacctgggacatcctttt 116
Query: 683 attcttccattgaagcctcttccttgctt 711
||||||| |||||||||||||||||||||
Sbjct: 117 attcttcaattgaagcctcttccttgctt 145
>gnl|LJGI|BP080098 similar to UniRef100_Q8LB17 Cluster: Uncharacterized protein
At3g58460; n=1; Arabidopsis thaliana|Rep: Uncharacterized
protein At3g58460 - Arabidopsis thaliana (Mouse-ear
cress), partial (6%)
Length = 384
Score = 147 bits (74), Expect = 2e-34
Identities = 80/82 (97%)
Strand = Plus / Minus
Query: 1128 gacgcaggtggaagtggcactggcggctgctgatggtgatcttaacgtggcagtggaaat 1187
|||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 350 gacgtaggtggaagtggcactggcagctgctgatggtgatcttaacgtggcagtggaaat 291
Query: 1188 actcatgagccagcagggttga 1209
||||||||||||||||||||||
Sbjct: 290 actcatgagccagcagggttga 269
>gnl|LJGI|TC81958 similar to UniRef100_Q8LB17 Cluster: Uncharacterized protein
At3g58460; n=1; Arabidopsis thaliana|Rep: Uncharacterized
protein At3g58460 - Arabidopsis thaliana (Mouse-ear
cress), partial (6%)
Length = 607
Score = 145 bits (73), Expect = 7e-34
Identities = 76/77 (98%)
Strand = Plus / Plus
Query: 1133 aggtggaagtggcactggcggctgctgatggtgatcttaacgtggcagtggaaatactca 1192
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 aggtggaagtggcactggcagctgctgatggtgatcttaacgtggcagtggaaatactca 203
Query: 1193 tgagccagcagggttga 1209
|||||||||||||||||
Sbjct: 204 tgagccagcagggttga 220
>gnl|LJGI|FS335064 similar to UniRef100_A7Q023 Cluster: Chromosome chr8 scaffold_41,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_41, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 649
Score = 131 bits (66), Expect = 1e-29
Identities = 72/74 (97%)
Strand = Plus / Plus
Query: 638 atacatatggcttgtttaatttcctcatacctgggacatctttttattcttccattgaag 697
|||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||
Sbjct: 576 atacatatggcttgtttaatttcctcatacctaggaaatctttttattcttccattgaag 635
Query: 698 cctcttccttgctt 711
||||||||||||||
Sbjct: 636 cctcttccttgctt 649
Score = 61.9 bits (31), Expect = 9e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 511 agtgtgtttgggttgtttaatgtgcctgccaagtg 545
|||||||||||||||||||||||| ||||||||||
Sbjct: 541 agtgtgtttgggttgtttaatgtgtctgccaagtg 575