Miyakogusa Predicted Gene
- Lj1g3v4753370.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4753370.1 CUFF.33136.1
(312 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS335053 595 e-170
gnl|LJGI|TC63290 329 6e-90
gnl|LJGI|TC73215 similar to UniRef100_Q44594 Cluster: Outer surf... 268 2e-71
>gnl|LJGI|FS335053
Length = 597
Score = 595 bits (300), Expect = e-170
Identities = 303/304 (99%)
Strand = Plus / Minus
Query: 9 ggagggggatgtcaccggaatcgttgaggaggaagagggtcgaagtcgaacgctgctccc 68
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 ggagggggatgtcaccggaatcgttgaggaggaagagggtcgaagtcgaacgctgctccc 538
Query: 69 gctggctttggtgccgccgccgtcgtttccccgaagtcaacatcaccagtcctgttgtgc 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 gctggctttggtgccgccgccgtcgtttccccgaagtcaacatcaccagtcctgttgtgc 478
Query: 129 cgctctcttaaatcgcgatggccgccgtttgcttcgccttgtttgcgccgctgaaacgcc 188
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 477 cgctctcttaaatcgcgatggccgccgttagcttcgccttgtttgcgccgctgaaacgcc 418
Query: 189 ccaggccatgacgaagcagaacccaccgtgtctctctccccaccgtcgtctcatgatttc 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 ccaggccatgacgaagcagaacccaccgtgtctctctccccaccgtcgtctcatgatttc 358
Query: 249 cgttaatgaggataacaagcgtggggagaacaggaaggaagatgaagaatttatagaagt 308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 cgttaatgaggataacaagcgtggggagaacaggaaggaagatgaagaatttatagaagt 298
Query: 309 ttga 312
||||
Sbjct: 297 ttga 294
>gnl|LJGI|TC63290
Length = 951
Score = 329 bits (166), Expect = 6e-90
Identities = 209/222 (94%), Gaps = 1/222 (0%)
Strand = Plus / Minus
Query: 1 atggctgaggagggggatgtcaccggaatcgttgaggaggaagagggtcgaagtcgaacg 60
|||||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||
Sbjct: 588 atggctgaggaggggg-tgtcaccggaatagttgaggaggaagagtgtcgaagtcgaacg 530
Query: 61 ctgctcccgctggctttggtgccgccgccgtcgtttccccgaagtcaacatcaccagtcc 120
||||||||||||||||||||| ||| || |||||||||||||||||| || |||||||||
Sbjct: 529 ctgctcccgctggctttggtgtcgctgctgtcgtttccccgaagtcagcagcaccagtcc 470
Query: 121 tgttgtgccgctctcttaaatcgcgatggccgccgtttgcttcgccttgtttgcgccgct 180
||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct: 469 tgttgcgccgctctcttaaatcgcgatggccgccgtttgctcctccttgtttgcgccgct 410
Query: 181 gaaacgccccaggccatgacgaagcagaacccaccgtgtctc 222
||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 409 gaaacgccccaggccatgacggagcagaacccatcgtgtctc 368
>gnl|LJGI|TC73215 similar to UniRef100_Q44594 Cluster: Outer surface protein D; n=1;
Borrelia afzelii|Rep: Outer surface protein D - Borrelia
afzelii, partial (5%)
Length = 579
Score = 268 bits (135), Expect = 2e-71
Identities = 159/167 (95%)
Strand = Plus / Minus
Query: 56 gaacgctgctcccgctggctttggtgccgccgccgtcgtttccccgaagtcaacatcacc 115
|||||||||||||||||||||||||| ||||||||||||||||||||||||| || ||||
Sbjct: 579 gaacgctgctcccgctggctttggtgtcgccgccgtcgtttccccgaagtcagcagcacc 520
Query: 116 agtcctgttgtgccgctctcttaaatcgcgatggccgccgtttgcttcgccttgtttgcg 175
|||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 519 agtcctgttgcgccgctctcttaaatcgcgatggccgccgtttgctccgccttgtttgca 460
Query: 176 ccgctgaaacgccccaggccatgacgaagcagaacccaccgtgtctc 222
|||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 459 ccgctgaaacgccccaggccatgacggagcagaacccatcgtgtctc 413