Miyakogusa Predicted Gene
- Lj1g3v4753360.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4753360.1 tr|G7IP72|G7IP72_MEDTR Exosome complex
exonuclease RRP45 OS=Medicago truncatula GN=MTR_2g019210
PE=4,81.96,0,Ribosomal protein S5 domain 2-like,Ribosomal protein S5
domain 2-type fold; Ribonuclease PH domain 2,CUFF.33142.1
(1347 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC63574 similar to UniRef100_A7Q7D8 Cluster: Chromosome... 2585 0.0
>gnl|LJGI|TC63574 similar to UniRef100_A7Q7D8 Cluster: Chromosome chr18 scaffold_59,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_59, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (69%)
Length = 1696
Score = 2585 bits (1304), Expect = 0.0
Identities = 1337/1350 (99%), Gaps = 3/1350 (0%)
Strand = Plus / Plus
Query: 1 atggagcagaggctagctaacagttggcgaatgacagttaacgagaagaaattcatcgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80 atggagcagaggctagctaacagttggcgaatgacagttaacgagaagaaattcatcgaa 139
Query: 61 accgcgctgctatcggagctccgagtcgacggtcgcggccccttggagtatcgcagactc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 accgcgctgctatcggagctccgagtcgacggtcgcggccccttggagtatcgcagactc 199
Query: 121 accatcaagttcgggaaggatgatggctcagccatggtgcaattgggggaaacacgcgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 accatcaagttcgggaaggatgatggctcagccatggtgcaattgggggaaacacgcgtg 259
Query: 181 atgagtttcgtcactgctcagcttgttcagccttacagagatagacccaatgaaggctcg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 atgagtttcgtcactgctcagcttgttcagccttacagagatagacccaatgaaggctcg 319
Query: 241 ctttctatcttcactgagttctctcccatggctgatccttccttcgagcctggccgtccc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ctttctatcttcactgagttctctcccatggctgatccttccttcgagcctggccgtccc 379
Query: 301 ggagagtctgccgttgagttaggccgcgttattgatcgtggtttgagagaaagcagagct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ggagagtctgccgttgagttaggccgcgttattgatcgtggtttgagagaaagcagagct 439
Query: 361 gttgacactgaatcgctatgtgttctttctggccagcttgtttgggctgttcggattgat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gttgacactgaatcgctatgtgttctttctggccagcttgtttgggctgttcggattgat 499
Query: 421 atccatatactggacaatgcaggaaatcttgttgatgctgcaaatgttgctgctttggct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 atccatatactggacaatgcaggaaatcttgttgatgctgcaaatgttgctgctttggct 559
Query: 481 tctctgtcgacattccgaaggcctgaatgttcattagggggagaagatggtcagaaagtt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tctctgtcgacattccgaaggcctgaatgttcattagggggagaagatggtcagaaagtt 619
Query: 541 gtggtgcatcctcctgaggtgcgcgatccgctcccgttgattatacatcatcttcctatt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gtggtgcatcctcctgaggtgcgcgatccgctcccgttgattatacatcatcttcctatt 679
Query: 601 gcagttacctttggatttttcagtgatgaatatcttgtgattatggatccgacataccag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 gcagttacctttggatttttcagtgatgaatatcttgtgattatggatccgacataccag 739
Query: 661 gaagagtctgtaatgactggacgtatgactgccacagttaatgcaaatggtgatgtttgt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 gaagagtctgtaatgactggacgtatgactgccacagttaatgcaaatggtgatgtttgt 799
Query: 721 gccattcaaaaagctggaggacagggagtgcttcagaagcttatcatgcactgcctgaga 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 gccattcaaaaagctggaggacagggagtgcttcagaagcttatcatgcactgcctgaga 859
Query: 781 cttgctcatgttaaagctggcgatattacaaccaagataaaagaggcagttgaaaaacac 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 860 cttgctcatgttaaagctggcgatattacaaccaagataaaagaggcagttgaaaaacac 919
Query: 841 aacactgaaagggcactacgcaagattaaacgccattcttctgtttccgtagatgtatgt 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 920 aacactgaaagggcactacgcaagattaaacgccattcttctgtttccgtagatgtatgt 979
Query: 901 ggaaccactgccaggttaggggagaaacaaaacccattagatggtgataaagatggtagc 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 980 ggaaccactgccaggttaggggagaaacaaaacccattagatggtgataaagatggtagc 1039
Query: 961 tgtttagaccaattgaagctgaaagatgaggggaattttatggaatgtgaagccacacca 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1040 tgtttagaccaattgaagctgaaagatgaggggaattttatggaatgtgaagccacacca 1099
Query: 1021 tcaggacatgtacaaagtagccagggggatggagtatcgaagaattttaccggtggccca 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1100 tcaggacatgtacaaagtagccagggggatggagtatcgaagaattttaccggtggccca 1159
Query: 1081 tctagttgggatccctactcggagtgtgtcaattcagatcttctaaaagcttctctagct 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1160 tctagttgggatccctactcggagtgtgtcaattcagatcttctaaaagcttctctagct 1219
Query: 1141 tcacgt---ggaccatcaggaaatgttaaacaaaaggattcaggatcggcaccaaagccg 1197
|||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1220 tcacgtgcaggaccatcagaaaatgttaaacaaaaggattcaggatcggcaccaaagccg 1279
Query: 1198 gaggaggcaccacaggaaatcaagaaagattcttcaccaattgacacagctctagctgct 1257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1280 gaggaggcaccacaggaaatcaagaaagattcttcaccaattgacacagctctagctgct 1339
Query: 1258 gagcagaacaatgaaggtaagactctaaaggatgccgtcaagcccaagaacagaagnnnn 1317
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1340 gagcagaacaatgaaggtaagactctaaaggatgccgtcaggcccaagaacagaagaaaa 1399
Query: 1318 nnnngagcacctaccaatagtggaaattaa 1347
||||||||||||||||||||||||||
Sbjct: 1400 aaaagagcacctaccaatagtggaaattaa 1429