Miyakogusa Predicted Gene
- Lj1g3v4753250.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4753250.1 tr|F4QAI2|F4QAI2_DICFS Transcription factor
jumonji OS=Dictyostelium fasciculatum (strain SH3)
GN=jc,39.09,1e-17,Clavaminate synthase-like,NULL; F-box domain,F-box
domain, cyclin-like; TRANSCRIPTION FACTOR JUMONJI,CUFF.33131.1
(1575 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58063 similar to UniRef100_Q67XX3 Cluster: F-box prot... 1164 0.0
gnl|LJGI|TC76469 similar to UniRef100_Q67XX3 Cluster: F-box prot... 755 0.0
>gnl|LJGI|TC58063 similar to UniRef100_Q67XX3 Cluster: F-box protein At5g06550; n=2;
Arabidopsis thaliana|Rep: F-box protein At5g06550 -
Arabidopsis thaliana (Mouse-ear cress), partial (33%)
Length = 799
Score = 1164 bits (587), Expect = 0.0
Identities = 623/641 (97%)
Strand = Plus / Plus
Query: 94 gttcccatcactagcaaacactgcattcccatcaccaaacagttaccacgcctcggnnnn 153
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 gttcccatcactagcaaacactgcattcccatcaccaaacagttaccacgcctcggagaa 218
Query: 154 nnnnnnnnnnnnnntggtgatgatgatgatgcagaggaagaaggtttcagcatcaaaagc 213
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 gaagaagaagaagatggtgatgatgatgatgcagaggaagaaggtttcagcatcaaaagc 278
Query: 214 tctgccccatcacacacccacggtgttcagcccttggggaatctctacttcaacccaggc 273
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 tctgccccatcacacacccacggtgttcagcccttggggaatctctacttcaacccaggc 338
Query: 274 tccaccaactccaggaacaccggcttaggtaatctccggacccttactgatgagcttgtt 333
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 tccaccaactccaggaacaccggcttaggtaatctccggacccttactgatgagcttgtt 398
Query: 334 ctcgagattctcgggtttttggatgctactagcttgggtgttctggcttctgttagcaag 393
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 ctcgagattctcgggtttttggatgctactagcttgggtgttctggcttctgttagcaag 458
Query: 394 tctttttatgtattcaccaatcatgaacccctttggaggaatcttgtgttggagaatctt 453
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 tctttttatgtattcaccaatcatgaacccctttggaggaatcttgtgttggagaatctt 518
Query: 454 cttggtgggtttcagtttaatgggtcttggaaatctacttatgttgctgcttgctaccct 513
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 cttggtgggtttcagtttaatgggtcttggaaatctacttatgttgctgcttgctaccct 578
Query: 514 tcatttgatatctcagtttctgctcttgggggttttaaagttagagacttttattcggat 573
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 tcatttgatatctcagtttctgctcttgggggttttaaagttagagacttttattcggat 638
Query: 574 tatctctttcagagctggctctgtgctaatcttgaaatgaagcctgaatggttggagagg 633
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 tatctctttcagagctggctctgtgctaatcttgaaatgaagcctgaatggttggagagg 698
Query: 634 gataatatagttcgaaaaaggggcatttcggttgaggagtttgtgttgaagtttgaagag 693
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 gataatatagttcgaaaaaggggcatttcggttgaggagtttgtgttgaagtttgaagag 758
Query: 694 ccaaataagcctgttttgttggaagggtgtattgataattg 734
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 759 ccaaataagcctgttttgttggaagggtgtattgataattg 799
Score = 75.8 bits (38), Expect = 7e-13
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 1 atgcggagcttcaggatgaggaacttgttgtccattgt 38
||||||||||||||||||||||||||||||||||||||
Sbjct: 63 atgcggagcttcaggatgaggaacttgttgtccattgt 100
>gnl|LJGI|TC76469 similar to UniRef100_Q67XX3 Cluster: F-box protein At5g06550; n=2;
Arabidopsis thaliana|Rep: F-box protein At5g06550 -
Arabidopsis thaliana (Mouse-ear cress), partial (22%)
Length = 564
Score = 755 bits (381), Expect = 0.0
Identities = 390/393 (99%)
Strand = Plus / Plus
Query: 1183 atgaacttctatggtgcaacaaaaagttggaaaaagaggccaattgagtgcatatgtaaa 1242
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atgaacttttatggtgcaacaaaaagttggaaaaagaggccaattgagtgcatatgtaaa 60
Query: 1243 gctggggaggtcatctttgtgcctaatggatggtggcatctggtgatcaacctggaggaa 1302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gctggggaggtcatctttgtgcctaatggatggtggcatctggtgatcaacctggaggaa 120
Query: 1303 tctatagccataacccaaaactatgttagtaggagaaatttgttaaatgtcttggatttt 1362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tctatagccataacccaaaactatgttagtaggagaaatttgttaaatgtcttggatttt 180
Query: 1363 cttaaaaggccaaatgcttgcacactggtatctggaacaagggatcgagtgaatttgtat 1422
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cttaaaaggcccaatgcttgcacactggtatctggaacaagggatcgagtgaatttgtat 240
Query: 1423 gataagttcaagaatgctattgaggcttcttttcctggagaaattgatgaactgacccaa 1482
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 241 gataagttcaagaatgctattgaggcttcttttcctggagaaattgatgaactgacccca 300
Query: 1483 aaagaacatgagaaaaagatccaacagaagaagctttcctactgggattctgttaccgat 1542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aaagaacatgagaaaaagatccaacagaagaagctttcctactgggattctgttaccgat 360
Query: 1543 cccagcatgggagctttcaagttctctttctag 1575
|||||||||||||||||||||||||||||||||
Sbjct: 361 cccagcatgggagctttcaagttctctttctag 393