Miyakogusa Predicted Gene
- Lj1g3v4753160.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4753160.1 tr|D3IBV9|D3IBV9_9BACT Sialate O-acetylesterase
OS=Prevotella sp. oral taxon 299 str. F0039
GN=HMPRE,41.3,0.66,seg,NULL,CUFF.33119.1
(352 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC70836 500 e-141
gnl|LJGI|TC65272 weakly similar to UniRef100_A0M088 Cluster: Lip... 428 e-119
gnl|LJGI|TC79630 similar to UniRef100_A5BE97 Cluster: Histone H2... 168 1e-41
gnl|LJGI|BP034883 similar to UniRef100_A5BE97 Cluster: Histone H... 139 1e-32
gnl|LJGI|TC80873 similar to UniRef100_A7QCJ8 Cluster: Chromosome... 119 1e-26
gnl|LJGI|DC598423 similar to UniRef100_Q5WWR8 Cluster: 4-hydroxy... 101 3e-21
gnl|LJGI|DC593375 UniRef100_A3UCX2 Cluster: Membrane-associated ... 82 3e-15
>gnl|LJGI|TC70836
Length = 585
Score = 500 bits (252), Expect = e-141
Identities = 267/271 (98%), Gaps = 2/271 (0%)
Strand = Plus / Plus
Query: 84 cgcgttttacatcctctgccatttcaaccttcattcgcgtttacatcctctgtcgtttca 143
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cgcgttttacatcctctgccgtttcaaccttcattcgcgtttacatcctctgtcgtttca 60
Query: 144 atcgtggcattcccatttcgcaatatcatccttaccaagactcaaacccacacaaaaacc 203
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atcgtggcattcccatttcgcaatatcatccttaccaagactcaaacccacacaaaaacc 120
Query: 204 tgctcctccatggtatcatcgttctctctgcttcgtcgttctcttattgatctattcata 263
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgctcctccatggtatcatcgttctctctgcttcgtcgttctcttattgatctattcata 180
Query: 264 ctcttgcatctgggagcaaccttcaaagccggtgatggacggg--ctgcttgcaaggcta 321
||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 181 ctcttgcatctgggagcaaccttcaaagccggtgatggacggggcccgcttgcaaggcta 240
Query: 322 ccgaagaggttccatccgggagcaacctaac 352
|||||||||||||||||||||||||||||||
Sbjct: 241 ccgaagaggttccatccgggagcaacctaac 271
>gnl|LJGI|TC65272 weakly similar to UniRef100_A0M088 Cluster: Lipid A export
ATP-binding/permease protein; n=1; Gramella forsetii
KT0803|Rep: Lipid A export ATP-binding/permease protein
- Gramella forsetii (strain KT0803), partial (5%)
Length = 1320
Score = 428 bits (216), Expect = e-119
Identities = 228/232 (98%)
Strand = Plus / Plus
Query: 121 cgtttacatcctctgtcgtttcaatcgtggcattcccatttcgcaatatcatccttacca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 cgtttacatcctctgtcgtttcaatcgtggcattcccatttcgcaatatcatccttacca 62
Query: 181 agactcaaacccacacaaaaacctgctcctccatggtatcatcgttctctctgcttcgtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 agactcaaacccacacaaaaacctgctcctccatggtatcatcgttctctctgcttcgtc 122
Query: 241 gttctcttattgatctattcatactcttgcatctgggagcaaccttcaaagccggtgatg 300
|||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 123 gttcccttattgatctattcatactcttgcatatgggagcaaccttcaaagccggtgatg 182
Query: 301 gacgggctgcttgcaaggctaccgaagaggttccatccgggagcaacctaac 352
|||| ||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 183 gacgagctgcttgcaaggctactgaagaggttccatccgggagcaacctaac 234
>gnl|LJGI|TC79630 similar to UniRef100_A5BE97 Cluster: Histone H2A; n=1; Vitis
vinifera|Rep: Histone H2A - Vitis vinifera (Grape),
partial (9%)
Length = 474
Score = 168 bits (85), Expect = 1e-41
Identities = 95/97 (97%), Gaps = 1/97 (1%)
Strand = Plus / Plus
Query: 256 tattcatactcttgcatctgggagcaaccttcaaagccggtgatggacgggctgcttgca 315
|||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||
Sbjct: 61 tattcatactcttgcatctgggagcaaccttcaaaggcggtgatggacgggct-cttgca 119
Query: 316 aggctaccgaagaggttccatccgggagcaacctaac 352
|||||||||||||||||||||||||||||||||||||
Sbjct: 120 aggctaccgaagaggttccatccgggagcaacctaac 156
Score = 95.6 bits (48), Expect = 2e-19
Identities = 54/56 (96%)
Strand = Plus / Plus
Query: 175 ttaccaagactcaaacccacacaaaaacctgctcctccatggtatcatcgttctct 230
|||||| |||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 5 ttaccaggactcaaacccacacaaaaacctgcttctccatggtatcatcgttctct 60
>gnl|LJGI|BP034883 similar to UniRef100_A5BE97 Cluster: Histone H2A; n=1; Vitis
vinifera|Rep: Histone H2A - Vitis vinifera (Grape),
partial (9%)
Length = 553
Score = 139 bits (70), Expect = 1e-32
Identities = 92/97 (94%), Gaps = 3/97 (3%)
Strand = Plus / Plus
Query: 256 tattcatactcttgcatctgggagcaaccttcaaagccggtgatggacgggctgcttgca 315
|||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||
Sbjct: 4 tattcatactct-gcatctgggagcaaccttcaaaggcggtgatggacgggctc--tgca 60
Query: 316 aggctaccgaagaggttccatccgggagcaacctaac 352
|||||||||||||||||||||||||||||||||||||
Sbjct: 61 aggctaccgaagaggttccatccgggagcaacctaac 97
>gnl|LJGI|TC80873 similar to UniRef100_A7QCJ8 Cluster: Chromosome chr12 scaffold_78,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_78, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (33%)
Length = 1115
Score = 119 bits (60), Expect = 1e-26
Identities = 85/92 (92%), Gaps = 1/92 (1%)
Strand = Plus / Plus
Query: 1 atggcactcaatccttcattcttcttatcctacacctttctccttatccttcac-catct 59
||||||||||||||||||||| ||||||||||||||||| | |||||||||||| |||||
Sbjct: 249 atggcactcaatccttcattcctcttatcctacaccttttttcttatccttcactcatct 308
Query: 60 ctccttaatcacattgattctaaacgcgtttt 91
|||||||||| |||| |||||||||| |||||
Sbjct: 309 ctccttaatcccatttattctaaacgggtttt 340
>gnl|LJGI|DC598423 similar to UniRef100_Q5WWR8 Cluster: 4-hydroxybenzoate
octaprenyltransferase; n=1; Legionella pneumophila str.
Lens|Rep: 4-hydroxybenzoate octaprenyltransferase -
Legionella pneumophila (strain Lens), partial (5%)
Length = 551
Score = 101 bits (51), Expect = 3e-21
Identities = 84/97 (86%), Gaps = 9/97 (9%)
Strand = Plus / Plus
Query: 256 tattcatactcttgcatctgggagcaaccttcaaagccggtgatggacgggctgcttgca 315
||||||||||||||||||| ||| |||||||||||| |||||||||||| |||
Sbjct: 3 tattcatactcttgcatctnggancaaccttcaaaggcggtgatggacgagct------- 55
Query: 316 aggctaccgaagaggttccatccgggagcaacctaac 352
|||||||||||||||||||||||||||||||||||
Sbjct: 56 --gctaccgaagaggttccatccgggagcaacctaac 90
>gnl|LJGI|DC593375 UniRef100_A3UCX2 Cluster: Membrane-associated protein; n=1;
Oceanicaulis alexandrii HTCC2633|Rep:
Membrane-associated protein - Oceanicaulis alexandrii
HTCC2633, partial (10%)
Length = 587
Score = 81.8 bits (41), Expect = 3e-15
Identities = 54/57 (94%), Gaps = 1/57 (1%)
Strand = Plus / Plus
Query: 36 ctttctccttatccttcac-catctctccttaatcacattgattctaaacgcgtttt 91
||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||
Sbjct: 1 ctttctccttatccttcactcatctctccttaatcccatttattctaaacgcgtttt 57