Miyakogusa Predicted Gene
- Lj1g3v4752940.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4752940.2 Non Chatacterized Hit- tr|D8T3B2|D8T3B2_SELML
Putative uncharacterized protein OS=Selaginella moelle,40.98,2e-18,no
description,START-like domain; Bet v1-like,NULL; seg,NULL,CUFF.33129.2
(1806 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS328490 weakly similar to UniRef100_Q2R2E6 Cluster: Ex... 1096 0.0
gnl|LJGI|FS339170 weakly similar to UniRef100_Q2R2E6 Cluster: Ex... 630 e-180
gnl|LJGI|FS354819 194 1e-48
gnl|LJGI|TC79083 weakly similar to UniRef100_A7Q055 Cluster: Chr... 190 2e-47
gnl|LJGI|BW598623 similar to UniRef100_Q9FNG4 Cluster: Gb|AAF231... 60 5e-08
gnl|LJGI|TC70679 60 5e-08
>gnl|LJGI|FS328490 weakly similar to UniRef100_Q2R2E6 Cluster: Expressed protein; n=2;
Oryza sativa Japonica Group|Rep: Expressed protein -
Oryza sativa subsp. japonica (Rice), partial (26%)
Length = 662
Score = 1096 bits (553), Expect = 0.0
Identities = 553/553 (100%)
Strand = Plus / Plus
Query: 1 atggcgaaaaagagacatattgtgcagtatagggagaggttggacaggacccttgcttcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 atggcgaaaaagagacatattgtgcagtatagggagaggttggacaggacccttgcttcc 169
Query: 61 cctgatctcacaaatggcgagatgctcaaaacgcttgtcaaaagtcaactactacgttct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 cctgatctcacaaatggcgagatgctcaaaacgcttgtcaaaagtcaactactacgttct 229
Query: 121 tcacaatttgaaattgaaggttatgaagataaatttgtagaaaccaaaactgcagagata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 tcacaatttgaaattgaaggttatgaagataaatttgtagaaaccaaaactgcagagata 289
Query: 181 acaaactttcttgatatgataagtgcttctgtagataatagtggaggatctagtatatca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 acaaactttcttgatatgataagtgcttctgtagataatagtggaggatctagtatatca 349
Query: 241 cacactgattggaagttaaaacaggataatgaagattaccgtgttatgtatcgtgaagga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 cacactgattggaagttaaaacaggataatgaagattaccgtgttatgtatcgtgaagga 409
Query: 301 ccagagggaactccctttcatacattgatggttgaaggctatatagatgggcctgttgat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 ccagagggaactccctttcatacattgatggttgaaggctatatagatgggcctgttgat 469
Query: 361 gtttgtttatgcctctcatgggaggcacccctttacaagaaatggtggcctcagtttact 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 gtttgtttatgcctctcatgggaggcacccctttacaagaaatggtggcctcagtttact 529
Query: 421 gttccgcctttcaaagttttagcagctgattgtttgcaaaaggtccagattggggaacag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 gttccgcctttcaaagttttagcagctgattgtttgcaaaaggtccagattggggaacag 589
Query: 481 atctcactagtaaggatgaaggttccgtggccgctgtcaaagagggaggctatagtgcac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 atctcactagtaaggatgaaggttccgtggccgctgtcaaagagggaggctatagtgcac 649
Query: 541 tattatctggttg 553
|||||||||||||
Sbjct: 650 tattatctggttg 662
>gnl|LJGI|FS339170 weakly similar to UniRef100_Q2R2E6 Cluster: Expressed protein; n=2;
Oryza sativa Japonica Group|Rep: Expressed protein -
Oryza sativa subsp. japonica (Rice), partial (13%)
Length = 581
Score = 630 bits (318), Expect = e-180
Identities = 321/322 (99%)
Strand = Plus / Plus
Query: 1 atggcgaaaaagagacatattgtgcagtatagggagaggttggacaggacccttgcttcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 atggcgaaaaagagacatattgtgcagtatagggagaggttggacaggacccttgcttcc 319
Query: 61 cctgatctcacaaatggcgagatgctcaaaacgcttgtcaaaagtcaactactacgttct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 cctgatctcacaaatggcgagatgctcaaaacgcttgtcaaaagtcaactactacgttct 379
Query: 121 tcacaatttgaaattgaaggttatgaagataaatttgtagaaaccaaaactgcagagata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tcacaatttgaaattgaaggttatgaagataaatttgtagaaaccaaaactgcagagata 439
Query: 181 acaaactttcttgatatgataagtgcttctgtagataatagtggaggatctagtatatca 240
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 440 acaaactttcttgatatgataaatgcttctgtagataatagtggaggatctagtatatca 499
Query: 241 cacactgattggaagttaaaacaggataatgaagattaccgtgttatgtatcgtgaagga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 cacactgattggaagttaaaacaggataatgaagattaccgtgttatgtatcgtgaagga 559
Query: 301 ccagagggaactccctttcata 322
||||||||||||||||||||||
Sbjct: 560 ccagagggaactccctttcata 581
>gnl|LJGI|FS354819
Length = 215
Score = 194 bits (98), Expect = 1e-48
Identities = 98/98 (100%)
Strand = Plus / Minus
Query: 1688 attcattttctatgaaaaatgaggcaacactgaaccagacaacaagtggtagcaaccaat 1747
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 attcattttctatgaaaaatgaggcaacactgaaccagacaacaagtggtagcaaccaat 156
Query: 1748 tagacattgatgcaatccaagatatgtctttagatgac 1785
||||||||||||||||||||||||||||||||||||||
Sbjct: 155 tagacattgatgcaatccaagatatgtctttagatgac 118
>gnl|LJGI|TC79083 weakly similar to UniRef100_A7Q055 Cluster: Chromosome chr8
scaffold_41, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr8 scaffold_41, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (21%)
Length = 735
Score = 190 bits (96), Expect = 2e-47
Identities = 393/491 (80%), Gaps = 7/491 (1%)
Strand = Plus / Plus
Query: 23 tgcagtatagggagaggttggacaggacccttg-cttcccctgatctcacaaatggcgag 81
||||||| ||||||||| | || |||||||||| | || |||||||| ||||||| |||
Sbjct: 177 tgcagtacagggagaggctagataggacccttgacctcacctgatcttacaaatgatgag 236
Query: 82 atgctcaaaacgcttgtcaaaagtcaactactacgttcttcacaatttgaaattgaaggt 141
| ||||||| |||||||||||| ||||| |||| ||| ||| ||| | | |||
Sbjct: 237 aaactcaaaaagcttgtcaaaagccaactcctacattcatca------gaagtagcagga 290
Query: 142 tatgaagataaatttgtagaaaccaaaactgcagagataacaaactttcttgatatgata 201
||||| || ||| | ||||||||||| ||||| ||| || | | ||||||||||||| |
Sbjct: 291 tatgaggagaaagtagtagaaaccaagactgctgaggtatctagctttcttgatatgctg 350
Query: 202 agtgcttctgtagataatagtggaggatctagtatatcacacactgattggaagttaaaa 261
|| | || ||| || ||||| |||||| || |||||||||||||||||||||||||
Sbjct: 351 aggagtgcttccgatgattgtggaagatctaatacatcacacactgattggaagttaaaa 410
Query: 262 caggataatgaagattaccgtgttatgtatcgtgaaggaccagagggaactccctttcat 321
||||| | |||||| | ||| |||||||||||||||| ||| ||||| | || ||||||
Sbjct: 411 caggacagtgaagagttccgcgttatgtatcgtgaagtacccaagggatcaccgtttcat 470
Query: 322 acattgatggttgaaggctatatagatgggcctgttgatgtttgtttatgcctctcatgg 381
|||||| | | ||||||| | |||| ||||||||||| |||||||| ||||||||
Sbjct: 471 acattgctattagaaggcttcgtggatgcccctgttgatgtctgtttatgtatctcatgg 530
Query: 382 gaggcacccctttacaagaaatggtggcctcagtttactgttccgcctttcaaagtttta 441
|| || |||||||||| |||||||||||||||| |||| |||| |||||||| | |||
Sbjct: 531 cagacatccctttacaaaaaatggtggcctcagtctactattcccactttcaaaatctta 590
Query: 442 gcagctgattgtttgcaaaaggtccagattggggaacagatctcactagtaaggatgaag 501
|| | || |||||| | |||| |||||||| ||||| || |||||||| |||||||||
Sbjct: 591 acatccgaatgtttggacaaggaccagattgcagaacaaatatcactagtgaggatgaag 650
Query: 502 gttccgtggcc 512
||||| |||||
Sbjct: 651 gttccatggcc 661
>gnl|LJGI|BW598623 similar to UniRef100_Q9FNG4 Cluster: Gb|AAF23188.1; n=1;
Arabidopsis thaliana|Rep: Gb|AAF23188.1 - Arabidopsis
thaliana (Mouse-ear cress), partial (5%)
Length = 459
Score = 60.0 bits (30), Expect = 5e-08
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 685 gtgggaggttatgttttgcaaaaggtgacctcagaaagaagttactttcg 734
|||||||| | || ||| ||||||||||| ||||||||||||||||||||
Sbjct: 85 gtgggaggctttgctttacaaaaggtgacatcagaaagaagttactttcg 134
>gnl|LJGI|TC70679
Length = 835
Score = 60.0 bits (30), Expect = 5e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 1349 aggctctagaaactctagagaaggccatttcaatggtt 1386
||||||||||||| ||||| ||||||||||||||||||
Sbjct: 85 aggctctagaaacactagataaggccatttcaatggtt 122