Miyakogusa Predicted Gene

Lj1g3v4752500.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v4752500.1 Non Chatacterized Hit- tr|K4ASD3|K4ASD3_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,37.84,8e-17,seg,NULL; FAMILY NOT NAMED,NULL,CUFF.33068.1
         (906 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AV766167 similar to UniRef100_A7QHS4 Cluster: Chromosom...   573   e-163

>gnl|LJGI|AV766167 similar to UniRef100_A7QHS4 Cluster: Chromosome chr8 scaffold_99,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr8 scaffold_99, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (28%)
          Length = 468

 Score =  573 bits (289), Expect = e-163
 Identities = 289/289 (100%)
 Strand = Plus / Plus

                                                                       
Query: 384 tgtgagctacttagaagcggtcgcgtgggaagaggctgaggaggaggagatattgaaaat 443
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   tgtgagctacttagaagcggtcgcgtgggaagaggctgaggaggaggagatattgaaaat 60

                                                                       
Query: 444 tgttcctcaaatgggattacaagctgagcctatcttagctagacttcaaccagtaaaaca 503
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  tgttcctcaaatgggattacaagctgagcctatcttagctagacttcaaccagtaaaaca 120

                                                                       
Query: 504 ttcagctcttgttaatgtctttctctcagccgtccgctttgctacatcttcccctccgcc 563
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttcagctcttgttaatgtctttctctcagccgtccgctttgctacatcttcccctccgcc 180

                                                                       
Query: 564 atcaatgaatgatctgaaatcttcagtgcaggagcagcttgagtacatgctaactgaaga 623
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atcaatgaatgatctgaaatcttcagtgcaggagcagcttgagtacatgctaactgaaga 240

                                                            
Query: 624 tgatgatgacagtcctttggtgacagctgatgacagcataaaaattgag 672
           |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgatgatgacagtcctttggtgacagctgatgacagcataaaaattgag 289



 Score =  323 bits (163), Expect = 1e-87
 Identities = 163/163 (100%)
 Strand = Plus / Plus

                                                                       
Query: 744 agaatcactttctgaggcagggaatacccagttgtttcaatcctatttgactgatttgtt 803
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 agaatcactttctgaggcagggaatacccagttgtttcaatcctatttgactgatttgtt 347

                                                                       
Query: 804 gtgggcttgtcagatattgagtaagttggaaataatgagagaatttgttgagtattggtt 863
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 gtgggcttgtcagatattgagtaagttggaaataatgagagaatttgttgagtattggtt 407

                                                      
Query: 864 tgatgcatcagaaaagatcatcagggtacttgagcaaggaagt 906
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 tgatgcatcagaaaagatcatcagggtacttgagcaaggaagt 450