Miyakogusa Predicted Gene
- Lj1g3v4730390.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4730390.1 Non Chatacterized Hit- tr|I0YUZ3|I0YUZ3_9CHLO
Uncharacterized protein OS=Coccomyxa subellipsoidea
C-,45.71,0.000003,UNKNOWN PROTEIN,NULL; 34 KDA TRANSCRIPTIONAL
CO-ACTIVATOR-RELATED,NULL; seg,NULL; Med27,Mediator com,CUFF.33060.1
(957 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC65373 similar to UniRef100_A7QA21 Cluster: Chromosome... 1439 0.0
gnl|LJGI|TC57857 similar to UniRef100_A7QA21 Cluster: Chromosome... 1199 0.0
>gnl|LJGI|TC65373 similar to UniRef100_A7QA21 Cluster: Chromosome chr8 scaffold_68,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_68, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (37%)
Length = 1344
Score = 1439 bits (726), Expect = 0.0
Identities = 743/751 (98%)
Strand = Plus / Plus
Query: 207 tcttgatgatggccttgaaactaatgaatcggcttcaaagaaattccgtgggtctgaaga 266
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tcttgatgacggccttgaaactaatgaatcggcttcaaagaaattccgtgggtctgaaga 61
Query: 267 agtgacagtggatactaaggaagaagtaagnnnnnnnagaaccgtacaagatgttcttaa 326
|||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 62 agtgacagtggatactaaggaagaagtaagtttttttagaaccgtacaagatgttcttaa 121
Query: 327 gtccttggaaaaggacgtgccaaatgtgaaaatttcaacttttgagcgattggactggtt 386
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 gtccttggaaaaggacgtgccaaatgtgaaaatttcaacttttgagcgattggactggtt 181
Query: 387 aaaaagagcttccacgctcacctcttcaacgaatgagagcactctggagcataactatcc 446
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 aaaaagagcttccacgctcacctcttcaacgaatgagagcactctggagcataactatcc 241
Query: 447 tggttctagtaagctaaggctaggatccgtgggaactgttgctgctgagaaggttgcggt 506
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 tggttctagtaagctaaggctaggatccgtgggaactgttgctgctgagaaggttgcggt 301
Query: 507 gatagagttgttgttcccatctatcttcagagctgttatttccttgcatcctgctggttc 566
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 gatagagttgttgttcccatctatcttcagagctgttatttccttgcatcctgctggttc 361
Query: 567 aattgatcctgatgctgtagctttctttgctcctgatgagagcggaagctatgtgcatgc 626
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 aattgatcctgatgctgtagctttctttgctcctgatgagagcggaagctatgtgcatgc 421
Query: 627 gagggggttttcagttcatcatgtgaatagacatattacggattatgcagcggtagctct 686
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 gagggggttttcagttcatcatgtgaatagacatattacggattatgcagcggtagctct 481
Query: 687 gcagtattttcttgggaaccaacctgaaacgtccctgtattctctcttgcactggataag 746
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 gcagtattttcttgggaaccaacctgaaacgtccctgtattctctcttgcactggataag 541
Query: 747 tagctatcagactctgttttcaagaccatgcagcaaatgttcaaagctacttgccatgga 806
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 tagctatcagactctgttttcaagaccatgcagcaaatgttcaaagctacttgccatgga 601
Query: 807 taaacaaacaaatttactgttgcccccagtccaccgtccttactggaagttttccttttc 866
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 taaacaaacaaatttactgttgcccccagtccaccgtccttactggaagttttccttttc 661
Query: 867 gaaaattttgtcaaacatatccttgaaggatcagaattcagatactactcaggcttatca 926
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 gaaaattttgtcaaacatatccttgaaggatcagaattcagatactactcaggcttatca 721
Query: 927 tactggctgcctgacagaagaagtatgattg 957
|||||||||||||||||||||||||||||||
Sbjct: 722 tactggctgcctgacagaagaagtatgattg 752
>gnl|LJGI|TC57857 similar to UniRef100_A7QA21 Cluster: Chromosome chr8 scaffold_68,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_68, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (59%)
Length = 955
Score = 1199 bits (605), Expect = 0.0
Identities = 619/626 (98%)
Strand = Plus / Plus
Query: 1 atggaagagtcaggagttctcggtgaatccgttcggtcgcggaaagacttttgggggctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 atggaagagtcaggagttctcggtgaatccgttcggtcgcggaaagacttttgggggctg 386
Query: 61 catatgccgctggtatgcccagatggtgccgtcgttgcatatgcttggaaacgacagctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 catatgccgctggtatgcccagatggtgccgtcgttgcatatgcttggaaacgacagctt 446
Query: 121 gcaggacaagccggtgcatctgccgttgacaggactaggttagctctcaaagccttcact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 gcaggacaagccggtgcatctgccgttgacaggactaggttagctctcaaagccttcact 506
Query: 181 gatcaaaaaagacgcttttttcctcatcttgatgatggccttgaaactaatgaatcggct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 gatcaaaaaagacgcttttttcctcatcttgatgatggccttgaaactaatgaatcggct 566
Query: 241 tcaaagaaattccgtgggtctgaagaagtgacagtggatactaaggaagaagtaagnnnn 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 tcaaagaaattccgtgggtctgaagaagtgacagtggatactaaggaagaagtaagtttt 626
Query: 301 nnnagaaccgtacaagatgttcttaagtccttggaaaaggacgtgccaaatgtgaaaatt 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 tttagaaccgtacaagatgttcttaagtccttggaaaaggacgtgccaaatgtgaaaatt 686
Query: 361 tcaacttttgagcgattggactggttaaaaagagcttccacgctcacctcttcaacgaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 tcaacttttgagcgattggactggttaaaaagagcttccacgctcacctcttcaacgaat 746
Query: 421 gagagcactctggagcataactatcctggttctagtaagctaaggctaggatccgtggga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 gagagcactctggagcataactatcctggttctagtaagctaaggctaggatccgtggga 806
Query: 481 actgttgctgctgagaaggttgcggtgatagagttgttgttcccatctatcttcagagct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807 actgttgctgctgagaaggttgcggtgatagagttgttgttcccatctatcttcagagct 866
Query: 541 gttatttccttgcatcctgctggttcaattgatcctgatgctgtagctttctttgctcct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 867 gttatttccttgcatcctgctggttcaattgatcctgatgctgtagctttctttgctcct 926
Query: 601 gatgagagcggaagctatgtgcatgc 626
||||||||||||||||||||||||||
Sbjct: 927 gatgagagcggaagctatgtgcatgc 952