Miyakogusa Predicted Gene
- Lj1g3v4729190.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4729190.1 tr|G0EIN3|G0EIN3_BRAIP Dehydratase medium subunit
OS=Brachyspira intermedia (strain ATCC 51140 / PWS,33.98,0.87,
,CUFF.33107.1
(350 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS336425 694 0.0
gnl|LJGI|FS337561 434 e-121
gnl|LJGI|DC594601 UniRef100_A8P2Q2 Cluster: Amine oxidase flavi... 174 2e-43
gnl|LJGI|FS338024 similar to UniRef100_Q4T3Y2 Cluster: Chromosom... 115 2e-25
gnl|LJGI|TC75809 similar to UniRef100_A7NXI7 Cluster: Chromosome... 54 6e-07
>gnl|LJGI|FS336425
Length = 682
Score = 694 bits (350), Expect = 0.0
Identities = 350/350 (100%)
Strand = Plus / Plus
Query: 1 atgcttacgttttggttctgcaatcaaagcttcggtttccattccaccccttcttctaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 atgcttacgttttggttctgcaatcaaagcttcggtttccattccaccccttcttctaac 119
Query: 61 ctcattcgttatgtttcagtaataagggaactgatccgcagcatcagagagatagcttgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 ctcattcgttatgtttcagtaataagggaactgatccgcagcatcagagagatagcttgc 179
Query: 121 ggtagaggactcaattctctcagatgcttctccgtcgctttcatcaccaaaatcgcagtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 ggtagaggactcaattctctcagatgcttctccgtcgctttcatcaccaaaatcgcagtc 239
Query: 181 cactctgccccgtcgagatgtctccttcgccgtagccaggttagatctctgttgacatct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 cactctgccccgtcgagatgtctccttcgccgtagccaggttagatctctgttgacatct 299
Query: 241 ctccctttgttggattgtcccactttcagagtttcaggctgtgataaaatttcgcccttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 ctccctttgttggattgtcccactttcagagtttcaggctgtgataaaatttcgcccttc 359
Query: 301 atgttgcctgcgcttgccatgttccgttcgcaattcatggtcgcttgagt 350
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 atgttgcctgcgcttgccatgttccgttcgcaattcatggtcgcttgagt 409
>gnl|LJGI|FS337561
Length = 701
Score = 434 bits (219), Expect = e-121
Identities = 219/219 (100%)
Strand = Plus / Plus
Query: 1 atgcttacgttttggttctgcaatcaaagcttcggtttccattccaccccttcttctaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35 atgcttacgttttggttctgcaatcaaagcttcggtttccattccaccccttcttctaac 94
Query: 61 ctcattcgttatgtttcagtaataagggaactgatccgcagcatcagagagatagcttgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95 ctcattcgttatgtttcagtaataagggaactgatccgcagcatcagagagatagcttgc 154
Query: 121 ggtagaggactcaattctctcagatgcttctccgtcgctttcatcaccaaaatcgcagtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 ggtagaggactcaattctctcagatgcttctccgtcgctttcatcaccaaaatcgcagtc 214
Query: 181 cactctgccccgtcgagatgtctccttcgccgtagccag 219
|||||||||||||||||||||||||||||||||||||||
Sbjct: 215 cactctgccccgtcgagatgtctccttcgccgtagccag 253
>gnl|LJGI|DC594601 UniRef100_A8P2Q2 Cluster: Amine oxidase flavin-containing family
protein; n=1; Brugia malayi|Rep: Amine oxidase, partial
(1%)
Length = 457
Score = 174 bits (88), Expect = 2e-43
Identities = 128/139 (92%), Gaps = 3/139 (2%)
Strand = Plus / Plus
Query: 213 tagccaggttagatctctgttgacatctctcccttt-gttggattgtcccactttcagag 271
|||||||||||||||| ||| |||||||| |||||| |||||||||||||||||||||||
Sbjct: 98 tagccaggttagatctatgtagacatctcccccttttgttggattgtcccactttcagag 157
Query: 272 tttcaggctgtgataaaatttcgcccttcat--gttgcctgcgcttgccatgttccgttc 329
||||||||||||||||||| | ||||||||| | |||||||||||||||||| |||||
Sbjct: 158 tttcaggctgtgataaaatgttgcccttcataattcgcctgcgcttgccatgtttcgttc 217
Query: 330 gcaattcatggtcgcttga 348
|||||||||||||||||||
Sbjct: 218 gcaattcatggtcgcttga 236
Score = 91.7 bits (46), Expect = 3e-18
Identities = 55/58 (94%)
Strand = Plus / Plus
Query: 1 atgcttacgttttggttctgcaatcaaagcttcggtttccattccaccccttcttcta 58
||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||
Sbjct: 42 atgcttacgttttggttctgcaatcaaggcttcagtttcgattccaccccttcttcta 99
>gnl|LJGI|FS338024 similar to UniRef100_Q4T3Y2 Cluster: Chromosome undetermined
SCAF9883, whole genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF9883,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer), partial (6%)
Length = 616
Score = 115 bits (58), Expect = 2e-25
Identities = 170/205 (82%), Gaps = 3/205 (1%)
Strand = Plus / Plus
Query: 24 tcaaagcttcggtttccattccaccccttcttctaacctcattcgttatgtttcagtaat 83
|||| ||||| |||||||||||| | ||||||| |||| |||||||| |||| |||||
Sbjct: 1 tcaaggcttctgtttccattccatcacttcttcaaaccccattcgttttgttgcagtata 60
Query: 84 aagggaactgatccgcagcatcagagagatagcttgcggtagaggactcaattctctcag 143
|||||||| ||| || ||||||||||| || ||| |||| ||||||||||||||
Sbjct: 61 aagggaaccgatgaatagaatcagagagatcagttccggcagagcactcaattctctcat 120
Query: 144 atgcttctccgtcgctttcatcaccaaaatcgcagtccactctgccccgtcgagatgtct 203
||||||||| | |||| |||||||||||||||| ||| |||| ||||| | |||||||||
Sbjct: 121 atgcttctcggccgctgtcatcaccaaaatcgctgtc-actccgcccctttgagatgtct 179
Query: 204 ccttcgc--cgtagccaggttagat 226
|||||| | ||||||||||||||
Sbjct: 180 ccttcgtgtcatagccaggttagat 204
Score = 60.0 bits (30), Expect = 9e-09
Identities = 47/50 (94%), Gaps = 2/50 (4%)
Strand = Plus / Plus
Query: 295 cccttcatgtt-gcctgcgcttgccatgttcc-gttcgcaattcatggtc 342
||||||||||| ||||||||||||| |||||| |||||||||||||||||
Sbjct: 355 cccttcatgttcgcctgcgcttgccgtgttccggttcgcaattcatggtc 404
>gnl|LJGI|TC75809 similar to UniRef100_A7NXI7 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (4%)
Length = 1426
Score = 54.0 bits (27), Expect = 6e-07
Identities = 55/63 (87%), Gaps = 1/63 (1%)
Strand = Plus / Minus
Query: 20 gcaatcaaagcttcggtttccattccaccccttcttctaacc-tcattcgttatgtttca 78
|||||||| ||||| ||||| |||||||||| ||||| |||| ||||||||| |||| ||
Sbjct: 1369 gcaatcaaggcttccgtttcaattccaccccctcttcaaaccctcattcgttttgttcca 1310
Query: 79 gta 81
|||
Sbjct: 1309 gta 1307