Miyakogusa Predicted Gene

Lj1g3v4729110.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v4729110.1 tr|G7IE43|G7IE43_MEDTR Lysine decarboxylase-like
protein OS=Medicago truncatula GN=MTR_1g105240 PE=4,89.24,0,no
description,NULL; seg,NULL; TIGR00730: TIGR00730 family
protein,Cytokinin riboside
5'-monophospha,NODE_61564_length_628_cov_26.076433.path1.1
         (492 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC60137 homologue to UniRef100_A7NZL1 Cluster: Chromoso...   105   3e-22
gnl|LJGI|TC65929 homologue to UniRef100_A7NZL1 Cluster: Chromoso...    68   6e-11
gnl|LJGI|TC58814 similar to UniRef100_Q84MC2 Cluster: Lysine dec...    66   2e-10
gnl|LJGI|TC80796 homologue to UniRef100_A7NSX4 Cluster: Chromoso...    54   8e-07

>gnl|LJGI|TC60137 homologue to UniRef100_A7NZL1 Cluster: Chromosome chr6 scaffold_3,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr6 scaffold_3, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (97%)
          Length = 851

 Score =  105 bits (53), Expect = 3e-22
 Identities = 167/205 (81%)
 Strand = Plus / Plus

                                                                       
Query: 122 acatgcaccaaaggaaagctgagatggctcgtcaagctgatgccttcattgccctccctg 181
           ||||||| ||||| ||||| || |||||| | ||| ||||||||||||||||| | || |
Sbjct: 306 acatgcatcaaagaaaagcagaaatggctagacaatctgatgccttcattgccttacccg 365

                                                                       
Query: 182 gaggatatggaacccttgaagaattgctggaagtaataacttgggctcagcttgggatcc 241
           | || ||||| || ||||| ||  | || || || |||||||||||||||||||| ||||
Sbjct: 366 gtggctatgggacacttgaggagcttcttgaggtgataacttgggctcagcttggcatcc 425

                                                                       
Query: 242 acaccaaacctgttggtctgttgaatgtggatggattttacaattccttgttgtgtttca 301
           |    ||||| || ||  || ||||||| |||||||  |||||||||||||||| |||||
Sbjct: 426 atgataaaccagtggggttgctgaatgtagatggatactacaattccttgttgtctttca 485

                                    
Query: 302 ttgacaaggctgttgatgaaggttt 326
           ||||||| ||||| || ||||||||
Sbjct: 486 ttgacaaagctgtggaggaaggttt 510


>gnl|LJGI|TC65929 homologue to UniRef100_A7NZL1 Cluster: Chromosome chr6 scaffold_3,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr6 scaffold_3, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (93%)
          Length = 919

 Score = 67.9 bits (34), Expect = 6e-11
 Identities = 160/202 (79%)
 Strand = Plus / Plus

                                                                       
Query: 122 acatgcaccaaaggaaagctgagatggctcgtcaagctgatgccttcattgccctccctg 181
           ||||||| ||||||||||| |||||||||   ||  |||||||||| |||||| | ||||
Sbjct: 359 acatgcatcaaaggaaagcagagatggctaagcattctgatgcctttattgccttacctg 418

                                                                       
Query: 182 gaggatatggaacccttgaagaattgctggaagtaataacttgggctcagcttgggatcc 241
           | || ||||| || ||||| ||  | || ||||| ||||| |||||||| ||||| || |
Sbjct: 419 gtggctatgggacacttgaggagctccttgaagtgataacatgggctcaacttggaattc 478

                                                                       
Query: 242 acaccaaacctgttggtctgttgaatgtggatggattttacaattccttgttgtgtttca 301
           |    ||||| || ||  || ||||||| |||||||  ||||||||| | |||| |||||
Sbjct: 479 atgataaaccggtgggattgctgaatgtagatggatactacaattcccttttgtctttca 538

                                 
Query: 302 ttgacaaggctgttgatgaagg 323
           ||||||| ||||| || |||||
Sbjct: 539 ttgacaaagctgtggaggaagg 560


>gnl|LJGI|TC58814 similar to UniRef100_Q84MC2 Cluster: Lysine decarboxylase-like
           protein At5g11950; n=2; Arabidopsis thaliana|Rep: Lysine
           decarboxylase-like protein At5g11950 - Arabidopsis
           thaliana (Mouse-ear cress), partial (96%)
          Length = 1078

 Score = 65.9 bits (33), Expect = 2e-10
 Identities = 99/121 (81%)
 Strand = Plus / Plus

                                                                       
Query: 155 aagctgatgccttcattgccctccctggaggatatggaacccttgaagaattgctggaag 214
           |||||||||||||  |||| ||||||||||||||||||||| | |||||  |  ||||  
Sbjct: 528 aagctgatgcctttgttgctctccctggaggatatggaaccatggaagagctattggaga 587

                                                                       
Query: 215 taataacttgggctcagcttgggatccacaccaaacctgttggtctgttgaatgtggatg 274
           | ||||||||||| || ||||| || || |  ||||| |||||||| |||||||| ||||
Sbjct: 588 tgataacttgggcgcaacttggaattcataagaaaccggttggtctattgaatgttgatg 647

            
Query: 275 g 275
           |
Sbjct: 648 g 648


>gnl|LJGI|TC80796 homologue to UniRef100_A7NSX4 Cluster: Chromosome chr18 scaffold_1,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_1, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (53%)
          Length = 528

 Score = 54.0 bits (27), Expect = 8e-07
 Identities = 68/82 (82%)
 Strand = Plus / Plus

                                                                       
Query: 123 catgcaccaaaggaaagctgagatggctcgtcaagctgatgccttcattgccctccctgg 182
           |||||||||| | || ||||| |||||| | ||||| ||||| || |||||| | || ||
Sbjct: 445 catgcaccaacgcaaggctgaaatggctagacaagcagatgcatttattgccttaccagg 504

                                 
Query: 183 aggatatggaacccttgaagaa 204
            |||||||| ||||||||||||
Sbjct: 505 tggatatggnacccttgaagaa 526