Miyakogusa Predicted Gene

Lj1g3v4725830.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v4725830.1 Non Chatacterized Hit- tr|K3Y5Z6|K3Y5Z6_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si009635,26.71,1e-18,PPR: pentatricopeptide repeat
domain,Pentatricopeptide repeat; no
description,Tetratricopeptide-like,CUFF.33039.1
         (1042 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC81661 similar to UniRef100_A7PP85 Cluster: Chromosome...  1086   0.0  
gnl|LJGI|TC67754 similar to UniRef100_A7PP85 Cluster: Chromosome...   571   e-162

>gnl|LJGI|TC81661 similar to UniRef100_A7PP85 Cluster: Chromosome chr8 scaffold_23,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr8 scaffold_23, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (52%)
          Length = 1234

 Score = 1086 bits (548), Expect = 0.0
 Identities = 548/548 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1    atgccgcagaggaatgtggcttcctggaacgcgatgttgtgtggttttgtgaaggatgga 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687  atgccgcagaggaatgtggcttcctggaacgcgatgttgtgtggttttgtgaaggatgga 746

                                                                        
Query: 61   gacttgagcagtgctaggggggtgtttgatgctatgcctgagaagaatgtggtttctttc 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747  gacttgagcagtgctaggggggtgtttgatgctatgcctgagaagaatgtggtttctttc 806

                                                                        
Query: 121  acgaccatgattgatggctatgctaaggctggtgatatggcagctgcgaggttcttgttt 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807  acgaccatgattgatggctatgctaaggctggtgatatggcagctgcgaggttcttgttt 866

                                                                        
Query: 181  gagcaagctacggaaaaggatgttgttgcctggtctgctttgatatcagggtatgtccag 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 867  gagcaagctacggaaaaggatgttgttgcctggtctgctttgatatcagggtatgtccag 926

                                                                        
Query: 241  aatggccagcctaatcaggcattgaaggtctttcttgagatggaatcaaagaatgtgaag 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 927  aatggccagcctaatcaggcattgaaggtctttcttgagatggaatcaaagaatgtgaag 986

                                                                        
Query: 301  cctgatgagttcatattggttagcttgatgtcagctacatctcagctgggccacttagaa 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 987  cctgatgagttcatattggttagcttgatgtcagctacatctcagctgggccacttagaa 1046

                                                                        
Query: 361  ctggctcaatgggttgattcttacgtaagcaagagctctattgatcttcaacaagaccat 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1047 ctggctcaatgggttgattcttacgtaagcaagagctctattgatcttcaacaagaccat 1106

                                                                        
Query: 421  gtaatcgcagcacttctggatatgaatgcgaagtgcgggaacatggacagggcgttaaag 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1107 gtaatcgcagcacttctggatatgaatgcgaagtgcgggaacatggacagggcgttaaag 1166

                                                                        
Query: 481  ttgtttaaagaaatgcctaaacgagatctagtttcatattgttcaatgatacaagggttg 540
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1167 ttgtttaaagaaatgcctaaacgagatctagtttcatattgttcaatgatacaagggttg 1226

                    
Query: 541  tcaattca 548
            ||||||||
Sbjct: 1227 tcaattca 1234


>gnl|LJGI|TC67754 similar to UniRef100_A7PP85 Cluster: Chromosome chr8 scaffold_23,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr8 scaffold_23, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (14%)
          Length = 858

 Score =  571 bits (288), Expect = e-162
 Identities = 288/288 (100%)
 Strand = Plus / Plus

                                                                        
Query: 755  gccggtcaggtcacttaggggatgcttatgaactcatgaagtcaatgcatgaacctcatg 814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    gccggtcaggtcacttaggggatgcttatgaactcatgaagtcaatgcatgaacctcatg 60

                                                                        
Query: 815  ctggtgcctggggtgcacttcttggggcatgtaaactccatggtgattcagatttaggag 874
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   ctggtgcctggggtgcacttcttggggcatgtaaactccatggtgattcagatttaggag 120

                                                                        
Query: 875  agattgttgctaatcaactttttgagcttgagcctcaaaatgcagctaactacatcctgt 934
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  agattgttgctaatcaactttttgagcttgagcctcaaaatgcagctaactacatcctgt 180

                                                                        
Query: 935  tgtctaacatctatgcagcagcagagcgatggatagatgtctcccttgtgagaagtagga 994
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  tgtctaacatctatgcagcagcagagcgatggatagatgtctcccttgtgagaagtagga 240

                                                            
Query: 995  tgagggagaggagcgtgcagaagatacccggttgcagtaaactttaat 1042
            ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  tgagggagaggagcgtgcagaagatacccggttgcagtaaactttaat 288