Miyakogusa Predicted Gene
- Lj1g3v4724820.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4724820.1 Non Chatacterized Hit- tr|K4BU71|K4BU71_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,32.8,3e-19,seg,NULL; PPR,Pentatricopeptide repeat;
PPR_2,Pentatricopeptide repeat; SUBFAMILY NOT NAMED,NULL;
FA,CUFF.33037.1
(622 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC81661 similar to UniRef100_A7PP85 Cluster: Chromosome... 1221 0.0
>gnl|LJGI|TC81661 similar to UniRef100_A7PP85 Cluster: Chromosome chr8 scaffold_23,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_23, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (52%)
Length = 1234
Score = 1221 bits (616), Expect = 0.0
Identities = 616/616 (100%)
Strand = Plus / Plus
Query: 1 atgtccatgcgttcaatctcttcctctcctcctcgttcagctgcgagcatcgccaccctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78 atgtccatgcgttcaatctcttcctctcctcctcgttcagctgcgagcatcgccaccctc 137
Query: 61 ttgaaagcctgcaagagaaccgaacaccttcagcaaatccacgcctgcatcatccaaaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 ttgaaagcctgcaagagaaccgaacaccttcagcaaatccacgcctgcatcatccaaaga 197
Query: 121 ggcctcgagcaagaccaattcctcatctccaatttcatctccctcgcccactccctctcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 ggcctcgagcaagaccaattcctcatctccaatttcatctccctcgcccactccctctcc 257
Query: 181 accatcgcttactcaaccaccgtcttcagtcgcgttctcagccccaccaccttcctctgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 accatcgcttactcaaccaccgtcttcagtcgcgttctcagccccaccaccttcctctgg 317
Query: 241 aacaccctcatcaaatcccactgccagaacagttacttccccgctaccctctccgctttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 aacaccctcatcaaatcccactgccagaacagttacttccccgctaccctctccgctttc 377
Query: 301 gctcgcatgaaggcaaatgggtctgttccggatacctacacataccctttggtgatcaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 gctcgcatgaaggcaaatgggtctgttccggatacctacacataccctttggtgatcaaa 437
Query: 361 gcgtgttctgcaatgtgcaggggtttggaaggaaaatcggttcatgggtcggcgctgagg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 gcgtgttctgcaatgtgcaggggtttggaaggaaaatcggttcatgggtcggcgctgagg 497
Query: 421 tgtggattggaagaggatgtgtttgtgggcaccagtttgatcgacatgtatggtaaatgc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 tgtggattggaagaggatgtgtttgtgggcaccagtttgatcgacatgtatggtaaatgc 557
Query: 481 ggggagattggcgatgctcgtaaggtgtttgatcgaatgtctgggagaaatgttgtttct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 ggggagattggcgatgctcgtaaggtgtttgatcgaatgtctgggagaaatgttgtttct 617
Query: 541 tggacggctatggttgttgggtatgttgctgctggggatgttgtggaggcaaagaagctg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 tggacggctatggttgttgggtatgttgctgctggggatgttgtggaggcaaagaagctg 677
Query: 601 tttgatggaatgccgc 616
||||||||||||||||
Sbjct: 678 tttgatggaatgccgc 693