Miyakogusa Predicted Gene
- Lj1g3v4721720.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4721720.1 Non Chatacterized Hit- tr|I1ND38|I1ND38_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,28.79,1e-16,PPR,Pentatricopeptide repeat; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL,CUFF.33041.1
(788 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|DC593356 weakly similar to UniRef100_A7P9F5 Cluster: Ch... 581 e-165
gnl|LJGI|TC60576 similar to UniRef100_A7P9F5 Cluster: Chromosome... 549 e-156
gnl|LJGI|TC82170 weakly similar to UniRef100_A7P9F5 Cluster: Chr... 525 e-148
gnl|LJGI|TC68987 similar to UniRef100_Q6ILL4 Cluster: HDC09080; ... 448 e-125
gnl|LJGI|BW594341 weakly similar to UniRef100_A7QH77 Cluster: Ch... 438 e-122
gnl|LJGI|TC62621 301 3e-81
gnl|LJGI|FS356651 204 6e-52
gnl|LJGI|AV776874 weakly similar to UniRef100_Q7X9F7 Cluster: Le... 182 2e-45
gnl|LJGI|TC81881 similar to UniRef100_A6FHB6 Cluster: Spr protei... 143 2e-33
gnl|LJGI|FS354708 weakly similar to UniRef100_Q9FIX3 Cluster: Gb... 92 6e-18
>gnl|LJGI|DC593356 weakly similar to UniRef100_A7P9F5 Cluster: Chromosome chr3
scaffold_8, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr3 scaffold_8, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (8%)
Length = 591
Score = 581 bits (293), Expect = e-165
Identities = 302/305 (99%)
Strand = Plus / Plus
Query: 484 gttcgtaaggcctataatatgtacatggagatggtgcattatggttttgttcctcatatg 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gttcgtaaggcctataatatgtacatggagatggtgcattatggttttgttcctcatatg 60
Query: 544 ttctctgcacttgctcttattaaggctctacattattgcggaaggcagaatgagatgagt 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttctctgcacttgctcttattaaggctctacattattgcggaaggcagaatgagatgagt 120
Query: 604 tgggtaattcaaaacacattgaggagctgtaatctcaatgagtttgagctacctaaagta 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgggtaattcaaaacacattgaggagctgtaatctcaatgagtttgagctacctaaagta 180
Query: 664 cttaatgaaattgacttcccgaaatgtcaaattaatgctcttttggatgtactagctgaa 723
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 181 cttaatgaaattgacttcccgaaatgtaaaattaatgctcttttggatgtactagctgaa 240
Query: 724 attgccatggatggcctgttacttgatggtggaaagtgttcatatgcttcagcaaaaacc 783
||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||
Sbjct: 241 attgccatggatggcctgttacttgatggtggaaagtgttcatatgcctcagcaagaacc 300
Query: 784 taata 788
|||||
Sbjct: 301 taata 305
>gnl|LJGI|TC60576 similar to UniRef100_A7P9F5 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (5%)
Length = 914
Score = 549 bits (277), Expect = e-156
Identities = 442/497 (88%)
Strand = Plus / Plus
Query: 280 ccaacttatataatatatgataccctgatagagaactgcagtaatgatgaatttaagagc 339
|||| |||||||| ||||||||| ||||||||||||||||||||| ||||||| |||||
Sbjct: 17 ccaagttatataacatatgatactctgatagagaactgcagtaataatgaattcaagagt 76
Query: 340 gtggtagggcttgtcaaaggcttcagcaagaggggtttagtgagtaaagcagccagagct 399
|||||||| ||||||||||| |||| ||||||||||||| || | ||||||||||||||
Sbjct: 77 gtggtaggacttgtcaaaggtttcatcaagaggggtttacagaatgaagcagccagagct 136
Query: 400 catgacacaatgctcgaagggaattataagccagatggagcagtttataatttattaata 459
|||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 137 catgacacaatgcttcacgggaattataagccagatggagcagtttataatttgttaata 196
Query: 460 tttgatcattgtagatgccttaatgttcgtaaggcctataatatgtacatggagatggtg 519
||| ||||| |||| ||||||||||| |||||| ||||||||||||| ||||||||||
Sbjct: 197 tttagtcattctagaagccttaatgttgataaggcatataatatgtacaaggagatggtg 256
Query: 520 cattatggttttgttcctcatatgttctctgcacttgctcttattaaggctctacattat 579
||||||||||||| ||||||||||||||||| |||||||||||||| |||||| || ||
Sbjct: 257 cattatggttttgatcctcatatgttctctgtgcttgctcttattaaagctctatatcat 316
Query: 580 tgcggaaggcagaatgagatgagttgggtaattcaaaacacattgaggagctgtaatctc 639
||||| | |||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 317 gttagaaggtacgatgagacgcgttgggtaattcaaaacacattgaggagctgtaatctc 376
Query: 640 aatgagtttgagctacctaaagtacttaatgaaattgacttcccgaaatgtcaaattaat 699
||||| | ||||||||||||||||||| |||||||||| || ||||| ||||||| ||
Sbjct: 377 aatgattctgagctacctaaagtacttgatgaaattgatgtcaggaaatttcaaattcat 436
Query: 700 gctcttttggatgtactagctgaaattgccatggatggcctgttacttgatggtggaaag 759
|||||| || ||| ||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 437 gctcttctgtctgtgctagctgaaatagccgtggatggcctgttacttgatggtggaaag 496
Query: 760 tgttcatatgcttcagc 776
|||||||||||||||||
Sbjct: 497 tgttcatatgcttcagc 513
>gnl|LJGI|TC82170 weakly similar to UniRef100_A7P9F5 Cluster: Chromosome chr3
scaffold_8, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr3 scaffold_8, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (17%)
Length = 832
Score = 525 bits (265), Expect = e-148
Identities = 442/501 (88%)
Strand = Plus / Plus
Query: 288 tataatatatgataccctgatagagaactgcagtaatgatgaatttaagagcgtggtagg 347
||||||||||||| | ||||||||||||||||||||| ||||||||||||| ||||||||
Sbjct: 138 tataatatatgattctctgatagagaactgcagtaataatgaatttaagagtgtggtagg 197
Query: 348 gcttgtcaaaggcttcagcaagaggggtttagtgagtaaagcagccagagctcatgacac 407
|||||||||||| ||| | | |||||||||||||| | |||| |||||||||| || |||
Sbjct: 198 gcttgtcaaaggtttcggaatgaggggtttagtgaatgaagccgccagagctcgtgtcac 257
Query: 408 aatgctcgaagggaattataagccagatggagcagtttataatttattaatatttgatca 467
|||| | || ||||||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 258 aatgtttgaggggaattataagccagatggagccgtttataatttattaatatttgaaca 317
Query: 468 ttgtagatgccttaatgttcgtaaggcctataatatgtacatggagatggtgcattatgg 527
|| |||||| | |||||||| |||||| ||| ||||||||||||||||||||||||||||
Sbjct: 318 ttctagatgtcgtaatgttcataaggcgtatgatatgtacatggagatggtgcattatgg 377
Query: 528 ttttgttcctcatatgttctctgcacttgctcttattaaggctctacattattgcggaag 587
||||| ||||||||||||||||| || |||||||||| ||||||| || || | |||||
Sbjct: 378 ttttgctcctcatatgttctctgtacgtgctcttatttgggctctatatcatggtggaag 437
Query: 588 gcagaatgagatgagttgggtaattcaaaacacattgaggagctgtaatctcaatgagtt 647
| | ||| |||||| |||||||| ||||||||||||||||||||||||||||||||| |
Sbjct: 438 gtacaataagatgatttgggtaaatcaaaacacattgaggagctgtaatctcaatgattc 497
Query: 648 tgagctacctaaagtacttaatgaaattgacttcccgaaatgtcaaattaatgctctttt 707
||||||| |||||||||||||||||||||| || | || || ||| | ||||||
Sbjct: 498 cgagctacttaaagtacttaatgaaattgacgtcaaggaaggtgaaactggggctcttga 557
Query: 708 ggatgtactagctgaaattgccatggatggcctgttacttgatggtggaaagtgttcata 767
|| ||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 558 ggttgtgctagctgaaatagccatggatgggctgttacttgatggtggaaagtgttcata 617
Query: 768 tgcttcagcaaaaacctaata 788
||||||||||| |||||||||
Sbjct: 618 tgcttcagcaagaacctaata 638
Score = 58.0 bits (29), Expect = 9e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 197 tgaatggacttaacaagaaagctaggccaagcgaagctaag 237
||||||||||||| |||||||||||| |||| |||||||||
Sbjct: 53 tgaatggacttaataagaaagctaggacaagggaagctaag 93
>gnl|LJGI|TC68987 similar to UniRef100_Q6ILL4 Cluster: HDC09080; n=1; Drosophila
melanogaster|Rep: HDC09080 - Drosophila melanogaster
(Fruit fly), partial (10%)
Length = 813
Score = 448 bits (226), Expect = e-125
Identities = 409/470 (87%)
Strand = Plus / Plus
Query: 285 ttatataatatatgataccctgatagagaactgcagtaatgatgaatttaagagcgtggt 344
||||||| || |||||| ||||||||||||||||||||| |||| |||| ||| |||||
Sbjct: 1 ttatatagtacatgatattctgatagagaactgcagtaataatgattttaggagtgtggt 60
Query: 345 agggcttgtcaaaggcttcagcaagaggggtttagtgagtaaagcagccagagctcatga 404
||||||| ||||||| ||| || ||||| ||||||| | |||||||||||||||||||
Sbjct: 61 agggcttatcaaaggtttcctcacgagggatttagtgtatgaagcagccagagctcatga 120
Query: 405 cacaatgctcgaagggaattataagccagatggagcagtttataatttattaatatttga 464
||||||||| || ||||||||||||| ||| || |||||||||||| ||||||||| |||
Sbjct: 121 cacaatgcttgaggggaattataagctagagggggcagtttataatgtattaatatatga 180
Query: 465 tcattgtagatgccttaatgttcgtaaggcctataatatgtacatggagatggtgcatta 524
||||||||||| ||||||| ||||||| ||| ||||||||| |||||||||||||||
Sbjct: 181 tcattgtagatctggtaatgtttgtaaggcgtatgatatgtacaaggagatggtgcatta 240
Query: 525 tggttttgttcctcatatgttctctgcacttgctcttattaaggctctacattattgcgg 584
|||||||| | ||||||||||||||| |||||||||||||||||||||| ||||| ||
Sbjct: 241 tggttttgcttctcatatgttctctgtacttgctcttattaaggctctatattatgatgg 300
Query: 585 aaggcagaatgagatgagttgggtaattcaaaacacattgaggagctgtaatctcaatga 644
||| | |||||||||||||||| |||||||| || |||||||||||||||||||||||
Sbjct: 301 aagttaccatgagatgagttgggtgattcaaaatactttgaggagctgtaatctcaatga 360
Query: 645 gtttgagctacctaaagtacttaatgaaattgacttcccgaaatgtcaaattaatgctct 704
| ||||||| | |||||||||||||||||||| | |||| || ||||| |||||||
Sbjct: 361 ttctgagctaattgaagtacttaatgaaattgacgtgaggaaacgtgaaattgatgctct 420
Query: 705 tttggatgtactagctgaaattgccatggatggcctgttacttgatggtg 754
||||||||||||||||||| | ||||| ||||||||||||||||||||||
Sbjct: 421 tttggatgtactagctgaagtagccatagatggcctgttacttgatggtg 470
>gnl|LJGI|BW594341 weakly similar to UniRef100_A7QH77 Cluster: Chromosome chr18
scaffold_96, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr18 scaffold_96, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (4%)
Length = 458
Score = 438 bits (221), Expect = e-122
Identities = 221/221 (100%)
Strand = Plus / Plus
Query: 1 atggatgaaaagagcatcggtccgttggatgaagacaccaatgaatcacttatggaacca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 atggatgaaaagagcatcggtccgttggatgaagacaccaatgaatcacttatggaacca 297
Query: 61 ctgtcggatgaggatacttattctagtttgatgaatgaatattttgctcaaggtaacttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 ctgtcggatgaggatacttattctagtttgatgaatgaatattttgctcaaggtaacttg 357
Query: 121 gaaaaggcttatgcgttggaatttgatatggatcacgatcgttacatgctaccttgtgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 gaaaaggcttatgcgttggaatttgatatggatcacgatcgttacatgctaccttgtgtt 417
Query: 181 accatgagtgtgtttttgaatggacttaacaagaaagctag 221
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 accatgagtgtgtttttgaatggacttaacaagaaagctag 458
>gnl|LJGI|TC62621
Length = 736
Score = 301 bits (152), Expect = 3e-81
Identities = 383/460 (83%)
Strand = Plus / Plus
Query: 314 actgcagtaatgatgaatttaagagcgtggtagggcttgtcaaaggcttcagcaagaggg 373
|||||||| ||| |||||||||||| | ||||||||||||||||| ||||||| ||||
Sbjct: 1 actgcagttatgttgaatttaagagtgcggtagggcttgtcaaagatttcagcaccaggg 60
Query: 374 gtttagtgagtaaagcagccagagctcatgacacaatgctcgaagggaattataagccag 433
||||||||| | ||||||| | ||||||||| | ||||| | || | ||||||||
Sbjct: 61 gtttagtgaatgaagcagcgatagctcatgaaagaatgcataacatgagtgttaagccag 120
Query: 434 atggagcagtttataatttattaatatttgatcattgtagatgccttaatgttcgtaagg 493
|||||||||| ||||||||||||||||||||||| |||||| | |||||| |||||
Sbjct: 121 atggagcagtctataatttattaatatttgatcactgtagaagaggcaatgttaataagg 180
Query: 494 cctataatatgtacatggagatggtgcattatggttttgttcctcatatgttctctgcac 553
| ||| | ||||||| |||||||||||||||||||||| ||||||||||||| |||| ||
Sbjct: 181 cgtatgaaatgtacaaggagatggtgcattatggtttttttcctcatatgttttctgtac 240
Query: 554 ttgctcttattaaggctctacattattgcggaaggcagaatgagatgagttgggtaattc 613
|| |||| ||| | |||||| |||| ||| | | | ||||||| ||||||||||||
Sbjct: 241 tttctctgattcatgctctatattacgatagaaagaacagtgagatgggttgggtaattc 300
Query: 614 aaaacacattgaggagctgtaatctcaatgagtttgagctacctaaagtacttaatgaaa 673
|||||||||||||||||||||||||||||| | ||| |||| | |||||||||||||||
Sbjct: 301 gaaacacattgaggagctgtaatctcaatgattctgaactacatcaagtacttaatgaaa 360
Query: 674 ttgacttcccgaaatgtcaaattaatgctcttttggatgtactagctgaaattgccatgg 733
|||| || ||| ||| | ||| ||||||||||| ||| |||||| |||| ||| |||
Sbjct: 361 ttgaagtcaagaagtgtaagattgatgctcttttgaatgcgctagctaaaatagccgtgg 420
Query: 734 atggcctgttacttgatggtggaaagtgttcatatgcttc 773
||||| |||| |||||| ||||||||||||||||||||||
Sbjct: 421 atggcatgttgcttgatcgtggaaagtgttcatatgcttc 460
>gnl|LJGI|FS356651
Length = 566
Score = 204 bits (103), Expect = 6e-52
Identities = 179/203 (88%), Gaps = 6/203 (2%)
Strand = Plus / Minus
Query: 592 aatgagatgagttgggtaattcaaaacacattgaggagctgtaatctcaatgagtttgag 651
||||||| ||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct: 552 aatgagaggagttgggtaattcaaaacacattgaggagctgtaatctcaatgattctgag 493
Query: 652 ctacctaaagtacttaatgaaattgacttcccgaaat---gtcaaattaatg---ctctt 705
|||| |||||||||||||||||||||| | ||||| || |||| || |||||
Sbjct: 492 ctacataaagtacttaatgaaattgacaccaggaaatttcctccaattggtgctactctt 433
Query: 706 ttggatgtactagctgaaattgccatggatggcctgttacttgatggtggaaagtgttca 765
|||||||| || |||||||| ||||||||||||||||||||||||||| |||||||||||
Sbjct: 432 ttggatgtgcttgctgaaatagccatggatggcctgttacttgatggtagaaagtgttca 373
Query: 766 tatgcttcagcaaaaacctaata 788
||||||||||||| ||||||||
Sbjct: 372 tatgcttcagcaagtacctaata 350
>gnl|LJGI|AV776874 weakly similar to UniRef100_Q7X9F7 Cluster: Lectin; n=1; Galega
orientalis|Rep: Lectin - Galega orientalis, partial (7%)
Length = 588
Score = 182 bits (92), Expect = 2e-45
Identities = 152/172 (88%)
Strand = Plus / Minus
Query: 605 gggtaattcaaaacacattgaggagctgtaatctcaatgagtttgagctacctaaagtac 664
|||| |||| |||||||||||||||||||||||||||||| | ||||| || |||| |||
Sbjct: 588 gggttattcgaaacacattgaggagctgtaatctcaatgattctgagcaacttaaaatac 529
Query: 665 ttaatgaaattgacttcccgaaatgtcaaattaatgctcttttggatgtactagctgaaa 724
|| ||||||||||| | || |||| |||| |||||||||||||||| ||||||||||
Sbjct: 528 ttgatgaaattgaccgcgagagatgtataatttatgctcttttggatgtgctagctgaaa 469
Query: 725 ttgccatggatggcctgttacttgatggtggaaagtgttcatatgcttcagc 776
|||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 468 aagccatggatggcttgttacttgatggtggaaagtgttcatatgcttcagc 417
>gnl|LJGI|TC81881 similar to UniRef100_A6FHB6 Cluster: Spr protein; n=1; Moritella
sp. PE36|Rep: Spr protein - Moritella sp. PE36, partial
(8%)
Length = 419
Score = 143 bits (72), Expect = 2e-33
Identities = 138/160 (86%)
Strand = Plus / Plus
Query: 604 tgggtaattcaaaacacattgaggagctgtaatctcaatgagtttgagctacctaaagta 663
|||||||| |||||||||||||||||||||||||||||||| |||||||||| ||||| |
Sbjct: 21 tgggtaatacaaaacacattgaggagctgtaatctcaatgattttgagctacttaaagca 80
Query: 664 cttaatgaaattgacttcccgaaatgtcaaattaatgctcttttggatgtactagctgaa 723
||| ||||| ||| ||| |||| || ||||| ||||||||||| |||| | |||||
Sbjct: 81 cttcctgaaaatgatgtccagaaaggtgaaattgatgctcttttgaatgtgttgactgaa 140
Query: 724 attgccatggatggcctgttacttgatggtggaaagtgtt 763
| | ||||||||||||||||||| |||||||||||||||
Sbjct: 141 aaagtcatggatggcctgttacttaatggtggaaagtgtt 180
>gnl|LJGI|FS354708 weakly similar to UniRef100_Q9FIX3 Cluster: Gb|AAD30619.1; n=1;
Arabidopsis thaliana|Rep: Gb|AAD30619.1 - Arabidopsis
thaliana, partial (3%)
Length = 543
Score = 91.7 bits (46), Expect = 6e-18
Identities = 70/78 (89%)
Strand = Plus / Minus
Query: 702 tcttttggatgtactagctgaaattgccatggatggcctgttacttgatggtggaaagtg 761
||||||| |||| ||||||||||| || |||||||||||| ||||| |||||||||||||
Sbjct: 359 tcttttgaatgtgctagctgaaatagcgatggatggcctgctacttaatggtggaaagtg 300
Query: 762 ttcatatgcttcagcaaa 779
||||||||| |||||||
Sbjct: 299 ctcatatgctccagcaaa 282
Score = 77.8 bits (39), Expect = 9e-14
Identities = 120/147 (81%)
Strand = Plus / Minus
Query: 527 gttttgttcctcatatgttctctgcacttgctcttattaaggctctacattattgcggaa 586
|||||| | ||||||||||||||| ||||||||||||||| || ||| | || ||||
Sbjct: 543 gttttgcttctcatatgttctctgtacttgctcttattaaagccctatttcatgttggaa 484
Query: 587 ggcagaatgagatgagttgggtaattcaaaacacattgaggagctgtaatctcaatgagt 646
|||| |||||| | || |||| |||||||| ||||||||| |||||| |||||| |
Sbjct: 483 ggcacaatgaggtaaggagggtcattcaaaatgtattgaggagttgtaatatcaatggtt 424
Query: 647 ttgagctacctaaagtacttaatgaaa 673
||||||||| ||||| ||||| |||||
Sbjct: 423 ttgagctacataaagcacttagtgaaa 397