Miyakogusa Predicted Gene
- Lj1g3v4719680.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4719680.1 tr|B9HBX0|B9HBX0_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_561466 PE=4 SV=1,42.47,1e-16,PH
domain-like,NULL; SUBFAMILY NOT NAMED,NULL; TRANSCRIPTION FACTOR SMIF
(DECAPPING ENZYME DCP1),Dcp,CUFF.33043.1
(1074 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC73009 similar to UniRef100_A7PP94 Cluster: Chromosome... 1134 0.0
gnl|LJGI|TC70567 weakly similar to UniRef100_A9S7I6 Cluster: Pre... 963 0.0
gnl|LJGI|FS336077 similar to UniRef100_A7QF75 Cluster: Chromosom... 72 8e-12
gnl|LJGI|TC64079 similar to UniRef100_A7PP94 Cluster: Chromosome... 72 8e-12
>gnl|LJGI|TC73009 similar to UniRef100_A7PP94 Cluster: Chromosome chr8 scaffold_23,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_23, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (41%)
Length = 730
Score = 1134 bits (572), Expect = 0.0
Identities = 572/572 (100%)
Strand = Plus / Plus
Query: 1 atgtctcagaagaaattgacgccgaatctggatcgccaaagcaccaaggtgctcaatctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 atgtctcagaagaaattgacgccgaatctggatcgccaaagcaccaaggtgctcaatctc 218
Query: 61 acggtgctccggcgaatggatccgttcatcgacgagatcctcttcaccgccgcacatgtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 acggtgctccggcgaatggatccgttcatcgacgagatcctcttcaccgccgcacatgtc 278
Query: 121 tctctgtacgacttcaacatcgaaagcaaccagtggagtcgcaagaatgttgaaggatct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 tctctgtacgacttcaacatcgaaagcaaccagtggagtcgcaagaatgttgaaggatct 338
Query: 181 ctcttcgttgtccaaaggaacccgcaagtgaaaccagagtttcagtttatcgtcatgaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 ctcttcgttgtccaaaggaacccgcaagtgaaaccagagtttcagtttatcgtcatgaat 398
Query: 241 cgaagaaatacagataacctaaaggagaacctattggattttgagtacgaacttaaaaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 cgaagaaatacagataacctaaaggagaacctattggattttgagtacgaacttaaaaaa 458
Query: 301 ccatacttgttatataggaatgcaaagcaagaagttaatggtatatggttttacaaccca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 ccatacttgttatataggaatgcaaagcaagaagttaatggtatatggttttacaaccca 518
Query: 361 gatgaatgtgaagaagttggaaatctctttaataggataattgatgaatacccaaaggca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 gatgaatgtgaagaagttggaaatctctttaataggataattgatgaatacccaaaggca 578
Query: 421 cctccaagtacaataatgccttctagcaatagtgagtttgaggagcttgagccagtgtca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 cctccaagtacaataatgccttctagcaatagtgagtttgaggagcttgagccagtgtca 638
Query: 481 attataagagaaagcctcctagagtcatcgtcagctgctgcttctgcaaatactcctgaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 attataagagaaagcctcctagagtcatcgtcagctgctgcttctgcaaatactcctgaa 698
Query: 541 gattatgttttcattaactccttgaacgcatc 572
||||||||||||||||||||||||||||||||
Sbjct: 699 gattatgttttcattaactccttgaacgcatc 730
>gnl|LJGI|TC70567 weakly similar to UniRef100_A9S7I6 Cluster: Predicted protein; n=1;
Physcomitrella patens subsp. patens|Rep: Predicted
protein - Physcomitrella patens subsp. patens, partial
(11%)
Length = 1029
Score = 963 bits (486), Expect = 0.0
Identities = 486/486 (100%)
Strand = Plus / Plus
Query: 589 tatgcttcgagtgtagaaagttttggacggccctaccattctgcaactgtcacttctact 648
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tatgcttcgagtgtagaaagttttggacggccctaccattctgcaactgtcacttctact 60
Query: 649 gtccccaatggtttattcactcctgcaccttctgtacaaataccatctgcctctcattta 708
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtccccaatggtttattcactcctgcaccttctgtacaaataccatctgcctctcattta 120
Query: 709 gcttcatctgcctctcttgaaacaatcaacattggcaatcaagtcactaaacttgttaac 768
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gcttcatctgcctctcttgaaacaatcaacattggcaatcaagtcactaaacttgttaac 180
Query: 769 ccttctacttttcttgcatccaactcttcatcttcactgataagttctcgtatactttcg 828
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ccttctacttttcttgcatccaactcttcatcttcactgataagttctcgtatactttcg 240
Query: 829 tctgtgccacctaatgcagctgttcatcatcccctgatactgccaaaccaatacggcact 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tctgtgccacctaatgcagctgttcatcatcccctgatactgccaaaccaatacggcact 300
Query: 889 ccagtttttcaacactttccaccacctaatcctcctctatctcttaaccctatccctagt 948
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccagtttttcaacactttccaccacctaatcctcctctatctcttaaccctatccctagt 360
Query: 949 cccacacctaatagacctgttatcagcagagataaagtccgtgatgcacttctatcactg 1008
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cccacacctaatagacctgttatcagcagagataaagtccgtgatgcacttctatcactg 420
Query: 1009 gttcaggatgatcaattcattgacatggtgttccaaaagttactgaaggtgaatctttcg 1068
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gttcaggatgatcaattcattgacatggtgttccaaaagttactgaaggtgaatctttcg 480
Query: 1069 tgaaca 1074
||||||
Sbjct: 481 tgaaca 486
>gnl|LJGI|FS336077 similar to UniRef100_A7QF75 Cluster: Chromosome undetermined
scaffold_87, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_87, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (95%)
Length = 851
Score = 71.9 bits (36), Expect = 8e-12
Identities = 144/180 (80%)
Strand = Plus / Plus
Query: 12 gaaattgacgccgaatctggatcgccaaagcaccaaggtgctcaatctcacggtgctccg 71
|||||||| ||||||||| || | |||||||||||||| ||||| ||||| || ||||
Sbjct: 184 gaaattgatgccgaatctagaccagcaaagcaccaaggttctcaacctcactgttctcca 243
Query: 72 gcgaatggatccgttcatcgacgagatcctcttcaccgccgcacatgtctctctgtacga 131
||||| || | ||| | || || || ||| ||||||||||||||||| | | |||||
Sbjct: 244 acgaatcgacgctttcgttgaggaaattctcatcaccgccgcacatgtcaccttctacga 303
Query: 132 cttcaacatcgaaagcaaccagtggagtcgcaagaatgttgaaggatctctcttcgttgt 191
||||||||||| | ||| |||||||||||| | ||||||||||| ||||| |||||
Sbjct: 304 gttcaacatcgaccaaagccaatggagtcgcaaggacgttgaaggatcgctctttgttgt 363
>gnl|LJGI|TC64079 similar to UniRef100_A7PP94 Cluster: Chromosome chr8 scaffold_23,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_23, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (61%)
Length = 1753
Score = 71.9 bits (36), Expect = 8e-12
Identities = 144/180 (80%)
Strand = Plus / Plus
Query: 12 gaaattgacgccgaatctggatcgccaaagcaccaaggtgctcaatctcacggtgctccg 71
|||||||| ||||||||| || | |||||||||||||| ||||| ||||| || ||||
Sbjct: 164 gaaattgatgccgaatctagaccagcaaagcaccaaggttctcaacctcactgttctcca 223
Query: 72 gcgaatggatccgttcatcgacgagatcctcttcaccgccgcacatgtctctctgtacga 131
||||| || | ||| | || || || ||| ||||||||||||||||| | | |||||
Sbjct: 224 acgaatcgacgctttcgttgaggaaattctcatcaccgccgcacatgtcaccttctacga 283
Query: 132 cttcaacatcgaaagcaaccagtggagtcgcaagaatgttgaaggatctctcttcgttgt 191
||||||||||| | ||| |||||||||||| | ||||||||||| ||||| |||||
Sbjct: 284 gttcaacatcgaccaaagccaatggagtcgcaaggacgttgaaggatcgctctttgttgt 343