Miyakogusa Predicted Gene

Lj1g3v4719640.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v4719640.1 tr|B9HBX4|B9HBX4_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_561472 PE=4 SV=1,69.57,0,WD
REPEAT CONTAINING PROTEIN,NULL; no description,WD40/YVTN
repeat-like-containing domain; WD40 repe,CUFF.33026.1
         (1059 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC79754 similar to UniRef100_Q2QDD4 Cluster: TTG1-like ...  1021   0.0  

>gnl|LJGI|TC79754 similar to UniRef100_Q2QDD4 Cluster: TTG1-like protein; n=1;
            Gossypium hirsutum|Rep: TTG1-like protein - Gossypium
            hirsutum (Upland cotton) (Gossypium mexicanum), partial
            (46%)
          Length = 711

 Score = 1021 bits (515), Expect = 0.0
 Identities = 515/515 (100%)
 Strand = Plus / Plus

                                                                        
Query: 545  tgtatgatatctcatggggtggattcaatgtgtttgcttctgtctccggcgatggttctg 604
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    tgtatgatatctcatggggtggattcaatgtgtttgcttctgtctccggcgatggttctg 60

                                                                        
Query: 605  tcagagtttttgatttacgggacaaggaaaaatctactataatctatgagaatccagtcc 664
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   tcagagtttttgatttacgggacaaggaaaaatctactataatctatgagaatccagtcc 120

                                                                        
Query: 665  aggattgtcctctgcttcgactggaatggaataaaagcgatgcaaggtttatggctaccg 724
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  aggattgtcctctgcttcgactggaatggaataaaagcgatgcaaggtttatggctaccg 180

                                                                        
Query: 725  tggggataaacagcaacaaggtggtaatcttggatattaggctaccaaccacgccattga 784
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  tggggataaacagcaacaaggtggtaatcttggatattaggctaccaaccacgccattga 240

                                                                        
Query: 785  tggagctaagcaaacataggacgtgtgttaatgcagtgtcgtggtccccaggttatggtc 844
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  tggagctaagcaaacataggacgtgtgttaatgcagtgtcgtggtccccaggttatggtc 300

                                                                        
Query: 845  ggaatctgtgttctgtcagtgatgatgctacggctctgatatgggaggtggtggaccccc 904
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301  ggaatctgtgttctgtcagtgatgatgctacggctctgatatgggaggtggtggaccccc 360

                                                                        
Query: 905  cggggtacggatcaacggtgatcggtggtgaggtggtggagcccgcgatgtggtatgggt 964
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361  cggggtacggatcaacggtgatcggtggtgaggtggtggagcccgcgatgtggtatgggt 420

                                                                        
Query: 965  cgccggcggaaatcaatcacgtgcgttggtccccggtggggatggactggattgctcttg 1024
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421  cgccggcggaaatcaatcacgtgcgttggtccccggtggggatggactggattgctcttg 480

                                               
Query: 1025 ctttcttgaacaacttgcagctgctcaaggtgtga 1059
            |||||||||||||||||||||||||||||||||||
Sbjct: 481  ctttcttgaacaacttgcagctgctcaaggtgtga 515