Miyakogusa Predicted Gene
- Lj1g3v4717290.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4717290.1 Non Chatacterized Hit- tr|I3SBC4|I3SBC4_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.38,0,seg,NULL;
IRON-SULFUR CLUSTER ASSEMBLY PROTEIN,NULL; no description,FeS cluster
biogenesis; HesB-lik,CUFF.33016.1
(486 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC66914 similar to UniRef100_Q8LCY2 Cluster: Iron-sulfu... 678 0.0
gnl|LJGI|TC62740 similar to UniRef100_Q8LCY2 Cluster: Iron-sulfu... 391 e-108
gnl|LJGI|CB828084 287 3e-77
gnl|LJGI|TC77784 UniRef100_A7PPD6 Cluster: Chromosome chr8 scaff... 133 1e-30
gnl|LJGI|FS318707 UniRef100_Q9LSU8 Cluster: Gb|AAD17449.1; n=1; ... 66 2e-10
gnl|LJGI|FS320908 66 2e-10
>gnl|LJGI|TC66914 similar to UniRef100_Q8LCY2 Cluster: Iron-sulfur assembly protein
IscA-like 2, mitochondrial precursor; n=1; Arabidopsis
thaliana|Rep: Iron-sulfur assembly protein IscA-like 2,
mitochondrial precursor - Arabidopsis thaliana
(Mouse-ear cress), partial (66%)
Length = 667
Score = 678 bits (342), Expect = 0.0
Identities = 345/346 (99%)
Strand = Plus / Plus
Query: 141 ccacgtggagcctgttcacatgaccgaaaattgccttcggagaatgaaggaattggaagc 200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccacgtggagcctgttcacatgaccgaaaattgccttcggagaatgaaggaattggaagc 260
Query: 201 cagtgaatcagcaactgccccaaaaacgcttcgattgagtgtagaaactggtggatgttc 260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cagtgaatcagcaactgccccaaaaacgcttcgattgagtgtagaaactggtggatgttc 320
Query: 261 tggatttcagtatgcttttgatctggatgacagaatcaactcagatgatagagtttttga 320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tggatttcagtatgcttttgatctggatgacagaatcaactcagatgatagagtttttga 380
Query: 321 gagggaaggaattaagctggttgttgacaatatatcatatgattttgtgaaaggcgcgac 380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gagggaaggaattaagctggttgttgacaatatatcatatgattttgtgaaaggcgcgac 440
Query: 381 tgttgattatgttgaggaactaattcgttcagcttttgtggtgactgaaaaccctagcgc 440
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 441 tgttgattatgttgaggaactaattcgttcagcttttgtggtgactgaaaaccccagcgc 500
Query: 441 agttggtggttgcagttgtaaaagttccttcatggtgaaacagtaa 486
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agttggtggttgcagttgtaaaagttccttcatggtgaaacagtaa 546
Score = 153 bits (77), Expect = 1e-36
Identities = 77/77 (100%)
Strand = Plus / Plus
Query: 1 atgcagacgtcgtcactgtttcgacgcctggctccgtcgttggcagctcgatttcgacag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atgcagacgtcgtcactgtttcgacgcctggctccgtcgttggcagctcgatttcgacag 120
Query: 61 aaccagaagcttacaag 77
|||||||||||||||||
Sbjct: 121 aaccagaagcttacaag 137
>gnl|LJGI|TC62740 similar to UniRef100_Q8LCY2 Cluster: Iron-sulfur assembly protein
IscA-like 2, mitochondrial precursor; n=1; Arabidopsis
thaliana|Rep: Iron-sulfur assembly protein IscA-like 2,
mitochondrial precursor - Arabidopsis thaliana
(Mouse-ear cress), partial (81%)
Length = 706
Score = 391 bits (197), Expect = e-108
Identities = 307/343 (89%), Gaps = 3/343 (0%)
Strand = Plus / Plus
Query: 143 acgtggagcctgttcacatgaccgaaaattgccttcggagaatgaaggaattggaagcca 202
||||||| || |||||||| |||||||| ||| |||||||||||||||| ||||||||||
Sbjct: 148 acgtggaacccgttcacatcaccgaaaactgcgttcggagaatgaaggagttggaagcca 207
Query: 203 gtgaatcagcaactgccccaaaaacgcttcgattgagtgtagaaactggtggatgttctg 262
|||||||| |||| ||||| |||||| |||||||| ||||||||||| |||||||
Sbjct: 208 gtgaatcaacaacaagtagaaaaatgcttcgtttgagtgttgaaactggtggttgttctg 267
Query: 263 gatttcagtatgcttttgatctggatga---cagaatcaactcagatgatagagtttttg 319
|||||||||||||||||||||| ||||| ||| ||||||||||||| ||||||||||
Sbjct: 268 gatttcagtatgcttttgatcttgatgatgacagtgtcaactcagatgacagagtttttg 327
Query: 320 agagggaaggaattaagctggttgttgacaatatatcatatgattttgtgaaaggcgcga 379
||| |||||||||||| ||||||||||| | | | || || |||||||||||||||||||
Sbjct: 328 agaaggaaggaattaaactggttgttgatagtgtttcgtacgattttgtgaaaggcgcga 387
Query: 380 ctgttgattatgttgaggaactaattcgttcagcttttgtggtgactgaaaaccctagcg 439
||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||| |
Sbjct: 388 ctgttgattatgttgaggaactaatccgttcagctttcgtggtgacagaaaaccctagtg 447
Query: 440 cagttggtggttgcagttgtaaaagttccttcatggtgaaaca 482
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 cagttggtggttgcagttgtaaaagttccttcatggtgaaaca 490
Score = 63.9 bits (32), Expect = 9e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 12 gtcactgtttcgacgcctggctccgtcgttggcagctcgatttcgacagaac 63
||||||| ||||||| |||| |||||||||||||| |||||||||||||||
Sbjct: 32 gtcactgattcgacggttggcgccgtcgttggcagcgcgatttcgacagaac 83
>gnl|LJGI|CB828084
Length = 528
Score = 287 bits (145), Expect = 3e-77
Identities = 249/283 (87%), Gaps = 3/283 (1%)
Strand = Plus / Plus
Query: 143 acgtggagcctgttcacatgaccgaaaattgccttcggagaatgaaggaattggaagcca 202
||||||| || |||||||| |||||||| ||| |||||||||||||||| ||||||||||
Sbjct: 113 acgtggaacccgttcacatcaccgaaaactgcgttcggagaatgaaggagttggaagcca 172
Query: 203 gtgaatcagcaactgccccaaaaacgcttcgattgagtgtagaaactggtggatgttctg 262
|||||||| |||| ||||| |||||| |||||||| ||||||||||| |||||||
Sbjct: 173 gtgaatcaacaacaagtagaaaaatgcttcgtttgagtgttgaaactggtggttgttctg 232
Query: 263 gatttcagtatgcttttgatctggatga---cagaatcaactcagatgatagagtttttg 319
|||||||||||||||||||||| ||||| ||| ||||||||||||| ||||||||||
Sbjct: 233 gatttcagtatgcttttgatcttgatgatgacagtgtcaactcagatgacagagtttttg 292
Query: 320 agagggaaggaattaagctggttgttgacaatatatcatatgattttgtgaaaggcgcga 379
||| |||||||||||| ||||||||||| | | | || || |||||||||||||||||||
Sbjct: 293 agaaggaaggaattaaactggttgttgatagtgtttcgtacgattttgtgaaaggcgcga 352
Query: 380 ctgttgattatgttgaggaactaattcgttcagcttttgtggt 422
||||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 353 ctgttgattatgttgaggaactaatccgttcagctttcgtggt 395
Score = 56.0 bits (28), Expect = 2e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 20 ttcgacgcctggctccgtcgttggcagctcgatttcgacagaac 63
||||||| |||| |||||||||||||| |||||||||||||||
Sbjct: 5 ttcgacggttggcgccgtcgttggcagcgcgatttcgacagaac 48
>gnl|LJGI|TC77784 UniRef100_A7PPD6 Cluster: Chromosome chr8 scaffold_23, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr8 scaffold_23, whole genome shotgun sequence - Vitis
vinifera (Grape), partial (11%)
Length = 413
Score = 133 bits (67), Expect = 1e-30
Identities = 67/67 (100%)
Strand = Plus / Plus
Query: 420 ggtgactgaaaaccctagcgcagttggtggttgcagttgtaaaagttccttcatggtgaa 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 ggtgactgaaaaccctagcgcagttggtggttgcagttgtaaaagttccttcatggtgaa 239
Query: 480 acagtaa 486
|||||||
Sbjct: 240 acagtaa 246
>gnl|LJGI|FS318707 UniRef100_Q9LSU8 Cluster: Gb|AAD17449.1; n=1; Arabidopsis
thaliana|Rep: Gb|AAD17449.1 - Arabidopsis thaliana
(Mouse-ear cress), partial (5%)
Length = 704
Score = 65.9 bits (33), Expect = 2e-10
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 11 cgtcactgtttcgacgcctggctccgtcgttgg 43
|||||||||||||||||||||||||||||||||
Sbjct: 30 cgtcactgtttcgacgcctggctccgtcgttgg 62
>gnl|LJGI|FS320908
Length = 664
Score = 65.9 bits (33), Expect = 2e-10
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 11 cgtcactgtttcgacgcctggctccgtcgttgg 43
|||||||||||||||||||||||||||||||||
Sbjct: 14 cgtcactgtttcgacgcctggctccgtcgttgg 46