Miyakogusa Predicted Gene

Lj1g3v4701790.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v4701790.1 tr|B9IKS8|B9IKS8_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_912833 PE=4
SV=1,26.71,0.000000000000006,seg,NULL; ATP-BINDING CASSETTE
TRANSPORTER (PDR),NULL; ATP-BINDING CASSETTE TRANSPORTER,NULL;
ABC2_m,CUFF.32965.1
         (1008 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC79697 similar to UniRef100_A7R926 Cluster: Chromosome...    52   7e-06
gnl|LJGI|TC67939 similar to UniRef100_A7P7K4 Cluster: Chromosome...    52   7e-06

>gnl|LJGI|TC79697 similar to UniRef100_A7R926 Cluster: Chromosome undetermined
           scaffold_3238, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_3238,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (39%)
          Length = 695

 Score = 52.0 bits (26), Expect = 7e-06
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 748 gtgtggtggagatggtactattgggc 773
           ||||||||||||||||||||||||||
Sbjct: 472 gtgtggtggagatggtactattgggc 497


>gnl|LJGI|TC67939 similar to UniRef100_A7P7K4 Cluster: Chromosome chr9 scaffold_7,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr9 scaffold_7, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (8%)
          Length = 631

 Score = 52.0 bits (26), Expect = 7e-06
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 748 gtgtggtggagatggtactattgggc 773
           ||||||||||||||||||||||||||
Sbjct: 119 gtgtggtggagatggtactattgggc 144