Miyakogusa Predicted Gene
- Lj1g3v4695520.3
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4695520.3 Non Chatacterized Hit- tr|I1JPX0|I1JPX0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.49389
PE,60.56,0,HhH-GPD,HhH-GPD domain; coiled-coil,NULL; no
description,DNA glycosylase; no description,Helix-turn-,CUFF.32948.3
(4332 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC69060 similar to UniRef100_A7PPJ7 Cluster: Chromosome... 722 0.0
gnl|LJGI|BP030310 similar to UniRef100_A7PPJ7 Cluster: Chromosom... 157 7e-37
gnl|LJGI|TC82047 103 9e-21
>gnl|LJGI|TC69060 similar to UniRef100_A7PPJ7 Cluster: Chromosome chr8 scaffold_23,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_23, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (31%)
Length = 1384
Score = 722 bits (364), Expect = 0.0
Identities = 370/372 (99%)
Strand = Plus / Plus
Query: 3899 agcaattgcccttggctctccctgaaaacacaaaccaaccagaagatcttcaacaaacag 3958
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agcaattgcccttggctctccctgaaaacacaaaccaaccagaagatcttcaacaaacag 60
Query: 3959 aagtcacgggacaacttgcagcaaagtctgaaaactatacttgccaacctattattgaag 4018
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aagtcacgggacaacttgcagcaaagtctgaaaactatacttgccaacctattattgaag 120
Query: 4019 agccagcaactccagagccagaagattcccatgtatctgacatagaggatgccttttatg 4078
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agccagcaactccagagccagaagattcccatgtatctgacatagaggatgccttttatg 180
Query: 4079 aggagtcggatgaaattcccaccatcaaactgaacatggaagaatttgcatcgaatttag 4138
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aggagtcggatgaaattcccaccatcaaactgaacatggaagaatttgcatcgaatttag 240
Query: 4139 aaaatcttatgcaaaataaaatggaacttcaagaaggtgaaatttccaaggccttggttg 4198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aaaatcttatgcaaaataaaatggaacttcaagaaggtgaaatttccaaggccttggttg 300
Query: 4199 ctctacatccagaagcgacgttcattcctacacccaagctgaagaatgtgacccggttga 4258
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 301 ctctacatccagaagcgacgttcattcctacacccaagctgaagaatgtgagccggttgc 360
Query: 4259 gaacagagcatt 4270
||||||||||||
Sbjct: 361 gaacagagcatt 372
>gnl|LJGI|BP030310 similar to UniRef100_A7PPJ7 Cluster: Chromosome chr8 scaffold_23,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_23, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (18%)
Length = 540
Score = 157 bits (79), Expect = 7e-37
Identities = 356/449 (79%), Gaps = 6/449 (1%)
Strand = Plus / Plus
Query: 3758 catgcccaatgagaggggaatgtagacacttcgcaagtgcttttgcaagcgcaaggcttg 3817
||||||||||||||| |||||||||||||| || ||||| |||||||| ||||||||||
Sbjct: 4 catgcccaatgagagcagaatgtagacactttgctagtgcatttgcaagtgcaaggcttg 63
Query: 3818 ccctgacaggaccagagcagaagagtatagttgtcacaactggaaacaatgcagcttatc 3877
||||| | |||||||||||||||||||||||| |||| ||||||| | ||| || |||
Sbjct: 64 ccctgcctggaccagagcagaagagtatagttaccacagctggaaatagtgcgactgatc 123
Query: 3878 agaacccatcaccaaccattcagcaattgcccttggctctccctgaaaacacaaaccaac 3937
|||| |||||| | ||| | || |||| ||| |||||||||||||||||| |||
Sbjct: 124 agaatccatcagtactcatcaatcagttgcggttgcctctccctgaaaacacaacgcaag 183
Query: 3938 cagaagatcttcaacaaacagaagtcacgggacaacttgcagcaaagtctgaaaactata 3997
||||||| |||| ||||||||||| | ||||||| | || ||||||| |||
Sbjct: 184 cagaagaaattcaccaaacagaagtgagcagacaactacaattgaaatctgaaataaata 243
Query: 3998 cttgccaacctattattgaagagccagcaactccagagccagaagattcccatgtat--- 4054
||||||||||| ||||||||||| || |||||||||||||| || || ||||
Sbjct: 244 tctgccaacctatcattgaagagccgacatctccagagccagaatgctcacaagtatacc 303
Query: 4055 ---ctgacatagaggatgccttttatgaggagtcggatgaaattcccaccatcaaactga 4111
||| |||||||||||||| ||||||| || ||||||||| ||||||||||| |
Sbjct: 304 taagtgatatagaggatgccttcaatgaggattcatgtgaaattccaaccatcaaactta 363
Query: 4112 acatggaagaatttgcatcgaatttagaaaatcttatgcaaaataaaatggaacttcaag 4171
|||| ||||| || | | |||||| ||||| ||| ||| | || |||||||||||||
Sbjct: 364 acattgaagagttcactttgaatttgcaaaattatatccaacaaaacatggaacttcaag 423
Query: 4172 aaggtgaaatttccaaggccttggttgct 4200
|||||||||| || ||||| | |||||||
Sbjct: 424 aaggtgaaatgtcaaaggcttnggttgct 452
>gnl|LJGI|TC82047
Length = 531
Score = 103 bits (52), Expect = 9e-21
Identities = 67/72 (93%)
Strand = Plus / Minus
Query: 1998 atggaagggatcagtagtggattcagtggttggagttttcctcactcaaaatgtctcaga 2057
|||||| |||||||| |||||||||||||| ||||||||||||||||||||||| || ||
Sbjct: 407 atggaaaggatcagttgtggattcagtggtaggagttttcctcactcaaaatgtgtcgga 348
Query: 2058 ccatctttccag 2069
||||||||||||
Sbjct: 347 ccatctttccag 336