Miyakogusa Predicted Gene

Lj1g3v4694390.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v4694390.1 Non Chatacterized Hit- tr|I1L554|I1L554_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,52.94,0.000003,seg,NULL,CUFF.32922.1
         (378 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC63208 similar to UniRef100_A7QQ47 Cluster: Chromosome...    72   3e-12

>gnl|LJGI|TC63208 similar to UniRef100_A7QQ47 Cluster: Chromosome chr2 scaffold_140,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr2 scaffold_140, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (59%)
          Length = 1578

 Score = 71.9 bits (36), Expect = 3e-12
 Identities = 54/60 (90%)
 Strand = Plus / Plus

                                                                       
Query: 261 gcttgctggtgtacatcttcgtgcattgatcctatttgctagtgacgatgcaattagcct 320
           |||||||||||||||||||  ||||||||||| || ||| ||||| ||||||||||||||
Sbjct: 670 gcttgctggtgtacatctttctgcattgatcccatctgcaagtgatgatgcaattagcct 729



 Score = 60.0 bits (30), Expect = 1e-08
 Identities = 102/122 (83%), Gaps = 3/122 (2%)
 Strand = Plus / Plus

                                                                       
Query: 134 tttgctcatggaatccttgccagaggccaacaacctcagaagctcttcaagcttcctttc 193
           ||||||| ||| |||| ||| ||||||||||| | ||||| || |||||| | |||||||
Sbjct: 741 tttgctcctgggatccctgcaagaggccaacagcttcagaggcccttcaa-catcctttc 799

                                                                       
Query: 194 ttctagagct-gctttt-acattcctctattccttcgcaccaaagcagcagcaaggactc 251
           ||| |||| | |||||| ||||||||| || ||||||||||| ||||| ||| || ||||
Sbjct: 800 ttccagagtttgctttttacattcctccatcccttcgcaccagagcagtagcgagaactc 859

             
Query: 252 ct 253
           ||
Sbjct: 860 ct 861