Miyakogusa Predicted Gene

Lj1g3v4691730.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v4691730.1 Non Chatacterized Hit- tr|I1MCW3|I1MCW3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.19572
PE,23.87,9e-18,seg,NULL; coiled-coil,NULL,CUFF.32878.1
         (1275 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC79421                                                       58   1e-07
gnl|LJGI|BP061314 weakly similar to UniRef100_A7QJ91 Cluster: Ch...    56   6e-07

>gnl|LJGI|TC79421 
          Length = 559

 Score = 58.0 bits (29), Expect = 1e-07
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                                 
Query: 1165 aagagatgggtggaaggaagtgaaaagccaagagtga 1201
            |||||||||||||||||||||||||||  ||||||||
Sbjct: 370  aagagatgggtggaaggaagtgaaaaggtaagagtga 334


>gnl|LJGI|BP061314 weakly similar to UniRef100_A7QJ91 Cluster: Chromosome chr8
           scaffold_106, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr8 scaffold_106, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (7%)
          Length = 192

 Score = 56.0 bits (28), Expect = 6e-07
 Identities = 73/88 (82%)
 Strand = Plus / Plus

                                                                       
Query: 413 tggagaccgcccgcgtggacttattggatagggagatttcatccatggagacagagaata 472
           |||||||||| ||||| || || |||||||| |||   |||||||| ||| |||| | ||
Sbjct: 50  tggagaccgcacgcgtcgaattcttggatagagaggcctcatccatagaggcagaaacta 109

                                       
Query: 473 agagattggagaatttcgcagttcaata 500
            ||||||||||||||| ||||| |||||
Sbjct: 110 tgagattggagaattttgcagtccaata 137