Miyakogusa Predicted Gene
- Lj1g3v4691630.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4691630.1 tr|A9SDQ3|A9SDQ3_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_77990
,38.24,1e-17,Mod_r,Modifier of rudimentary, Modr; seg,NULL; UNKNOWN
PROTEIN,NULL; WILLIAMS-BEUREN SYNDROME CRITIC,CUFF.32868.1
(534 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC72070 similar to UniRef100_A7QJA5 Cluster: Chromosome... 1059 0.0
gnl|LJGI|TC59452 similar to UniRef100_A7QJA5 Cluster: Chromosome... 1059 0.0
gnl|LJGI|TC82774 similar to UniRef100_Q9FUY2 Cluster: Transcript... 56 2e-07
gnl|LJGI|TC68997 similar to UniRef100_A7PJ36 Cluster: Chromosome... 56 2e-07
gnl|LJGI|DC598837 similar to UniRef100_A7QHQ5 Cluster: Chromosom... 54 9e-07
gnl|LJGI|TC78706 similar to UniRef100_A7Q186 Cluster: Chromosome... 54 9e-07
>gnl|LJGI|TC72070 similar to UniRef100_A7QJA5 Cluster: Chromosome chr8 scaffold_106,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_106, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (85%)
Length = 779
Score = 1059 bits (534), Expect = 0.0
Identities = 534/534 (100%)
Strand = Plus / Plus
Query: 1 atgttcagattctggggatcgcaagagcagcagcagcagcaacaacaacaaccgcaggat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94 atgttcagattctggggatcgcaagagcagcagcagcagcaacaacaacaaccgcaggat 153
Query: 61 ggttcttcttcacagtcgtggtatccgccgtccgtgacgagctcgccgaggccagccacg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 ggttcttcttcacagtcgtggtatccgccgtccgtgacgagctcgccgaggccagccacg 213
Query: 121 ccgacttcctcttcgtcttcatctcaacagaggccttcttcgcatgttcctcctgctgaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 ccgacttcctcttcgtcttcatctcaacagaggccttcttcgcatgttcctcctgctgaa 273
Query: 181 gccgctgggattatttctgctttgaaggacaagagtgttgatgagttacggaagctttta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 gccgctgggattatttctgctttgaaggacaagagtgttgatgagttacggaagctttta 333
Query: 241 tctgacaaagatgcatatcaacagtttttaaattcgcttgatcaggtcaagattcaaaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 tctgacaaagatgcatatcaacagtttttaaattcgcttgatcaggtcaagattcaaaat 393
Query: 301 aatctgaaagatgaactttgcaaggagaatttgcagcttgcagaggaaaatctacaaaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 aatctgaaagatgaactttgcaaggagaatttgcagcttgcagaggaaaatctacaaaag 453
Query: 361 gaacctcgtatcatggaacttaggaaccaatgtagaataattcggacaaccgaattagcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 gaacctcgtatcatggaacttaggaaccaatgtagaataattcggacaaccgaattagcc 513
Query: 421 actgctaatgagaaactaaatgagcttgagaagcagaaggaagaaatgatgaagttgaac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 actgctaatgagaaactaaatgagcttgagaagcagaaggaagaaatgatgaagttgaac 573
Query: 481 tcccctgcatctctcctccaaaggattcaagagtctataaataagacagatgag 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 tcccctgcatctctcctccaaaggattcaagagtctataaataagacagatgag 627
>gnl|LJGI|TC59452 similar to UniRef100_A7QJA5 Cluster: Chromosome chr8 scaffold_106,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_106, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (85%)
Length = 1216
Score = 1059 bits (534), Expect = 0.0
Identities = 534/534 (100%)
Strand = Plus / Plus
Query: 1 atgttcagattctggggatcgcaagagcagcagcagcagcaacaacaacaaccgcaggat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106 atgttcagattctggggatcgcaagagcagcagcagcagcaacaacaacaaccgcaggat 165
Query: 61 ggttcttcttcacagtcgtggtatccgccgtccgtgacgagctcgccgaggccagccacg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 ggttcttcttcacagtcgtggtatccgccgtccgtgacgagctcgccgaggccagccacg 225
Query: 121 ccgacttcctcttcgtcttcatctcaacagaggccttcttcgcatgttcctcctgctgaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 ccgacttcctcttcgtcttcatctcaacagaggccttcttcgcatgttcctcctgctgaa 285
Query: 181 gccgctgggattatttctgctttgaaggacaagagtgttgatgagttacggaagctttta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 gccgctgggattatttctgctttgaaggacaagagtgttgatgagttacggaagctttta 345
Query: 241 tctgacaaagatgcatatcaacagtttttaaattcgcttgatcaggtcaagattcaaaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 tctgacaaagatgcatatcaacagtttttaaattcgcttgatcaggtcaagattcaaaat 405
Query: 301 aatctgaaagatgaactttgcaaggagaatttgcagcttgcagaggaaaatctacaaaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 aatctgaaagatgaactttgcaaggagaatttgcagcttgcagaggaaaatctacaaaag 465
Query: 361 gaacctcgtatcatggaacttaggaaccaatgtagaataattcggacaaccgaattagcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 gaacctcgtatcatggaacttaggaaccaatgtagaataattcggacaaccgaattagcc 525
Query: 421 actgctaatgagaaactaaatgagcttgagaagcagaaggaagaaatgatgaagttgaac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 actgctaatgagaaactaaatgagcttgagaagcagaaggaagaaatgatgaagttgaac 585
Query: 481 tcccctgcatctctcctccaaaggattcaagagtctataaataagacagatgag 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 tcccctgcatctctcctccaaaggattcaagagtctataaataagacagatgag 639
>gnl|LJGI|TC82774 similar to UniRef100_Q9FUY2 Cluster: Transcriptional corepressor
LEUNIG; n=1; Arabidopsis thaliana|Rep: Transcriptional
corepressor LEUNIG - Arabidopsis thaliana (Mouse-ear
cress), partial (17%)
Length = 618
Score = 56.0 bits (28), Expect = 2e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 21 gcaagagcagcagcagcagcaacaacaacaac 52
|||| |||||||||||||||||||||||||||
Sbjct: 201 gcaacagcagcagcagcagcaacaacaacaac 232
>gnl|LJGI|TC68997 similar to UniRef100_A7PJ36 Cluster: Chromosome chr12 scaffold_18,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_18, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (51%)
Length = 1413
Score = 56.0 bits (28), Expect = 2e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 21 gcaagagcagcagcagcagcaacaacaacaac 52
|||| |||||||||||||||||||||||||||
Sbjct: 378 gcaacagcagcagcagcagcaacaacaacaac 409
>gnl|LJGI|DC598837 similar to UniRef100_A7QHQ5 Cluster: Chromosome chr8 scaffold_99,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_99, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (42%)
Length = 576
Score = 54.0 bits (27), Expect = 9e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 26 agcagcagcagcagcaacaacaacaac 52
|||||||||||||||||||||||||||
Sbjct: 198 agcagcagcagcagcaacaacaacaac 224
>gnl|LJGI|TC78706 similar to UniRef100_A7Q186 Cluster: Chromosome chr10 scaffold_43,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_43, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (16%)
Length = 870
Score = 54.0 bits (27), Expect = 9e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 26 agcagcagcagcagcaacaacaacaac 52
|||||||||||||||||||||||||||
Sbjct: 251 agcagcagcagcagcaacaacaacaac 277