Miyakogusa Predicted Gene
- Lj1g3v4691480.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4691480.1 tr|Q7NIW8|Q7NIW8_GLOVI Endopeptidase Clp
ATP-binding chain OS=Gloeobacter violaceus (strain PCC
7421,44.59,0.0000000005,Double Clp-N motif,NULL; ATP-DEPENDENT CLP
PROTEASE,NULL; seg,NULL; no description,Double Clp-N moti,CUFF.32897.1
(828 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC71531 similar to UniRef100_P35100 Cluster: ATP-depend... 1080 0.0
gnl|LJGI|TC68560 similar to UniRef100_P35100 Cluster: ATP-depend... 327 6e-89
gnl|LJGI|TC75882 similar to UniRef100_P35100 Cluster: ATP-depend... 313 1e-84
gnl|LJGI|AV406949 similar to UniRef100_P31542 Cluster: ATP-depen... 256 2e-67
gnl|LJGI|TC75634 similar to UniRef100_P35100 Cluster: ATP-depend... 202 2e-51
gnl|LJGI|BW632959 similar to UniRef100_P35100 Cluster: ATP-depen... 117 1e-25
>gnl|LJGI|TC71531 similar to UniRef100_P35100 Cluster: ATP-dependent Clp protease
ATP-binding subunit clpC homolog, chloroplast precursor;
n=1; Pisum sativum|Rep: ATP-dependent Clp protease
ATP-binding subunit clpC homolog, chloroplast precursor
- Pisum sativum (Garden pea), partial (14%)
Length = 599
Score = 1080 bits (545), Expect = 0.0
Identities = 551/553 (99%)
Strand = Plus / Plus
Query: 21 tccgattctgcaattttcccttctccatttcaccaccatcaacgagatcggaatcatgtc 80
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47 tccgattctgcaattttcccttctccatttcaccaccatcaacgagatcggaatcatgtc 106
Query: 81 tagggttttggctcagtcaatcaatatccctggcctagtggccgggcgaacgcacggtcg 140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107 tagggttttggctcagtcaatcaatatccctggcctagtggccgggcgaacgcacggtcg 166
Query: 141 taataacaggtccacgaagtcgaaaagacctgtcaaaatgatgtataccaccttgcaagc 200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 taataacaggtccacgaagtcgaaaagacctgtcaaaatgatgtataccaccttgcaagc 226
Query: 201 tcctgcactaagattgtcaggtttctcgggcctgcgtagttttaataatttggatactat 260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 tcctgcactaagattgtcaggtttctcgggcctgcgtagttttaataatttggatactat 286
Query: 261 gttgagacctggactagattttcattctaaggtgttcgctactacaactatgtctcgtaa 320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 gttgagacctggactagattttcattctaaggtgttcgctactacaactatgtctcgtaa 346
Query: 321 ggcgagggctagcagatgcgtaccgaaagccatgtttgagcgtttcacggagaaagcaat 380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 ggcgagggctagcagatgcgtaccgaaagccatgtttgagcgtttcacggagaaagcaat 406
Query: 381 caaagtgattatgcttgcccaggaggaggcgagacggatgggtcataattttgttgggac 440
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 407 caaagtgattatgcttgcccaggaggaggcgagacggatgggtcataattttgtagggac 466
Query: 441 ggaacaggtcctgttgggtcttattggtgaaggcactggtattgctgctaaggttctcaa 500
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 467 ggaacaggtcctgttgggtcttataggtgaaggcactggtattgctgctaaggttctcaa 526
Query: 501 ggctatgggtattagccttaaagatgcacgtgtggaagtggaaaagatcattggaagggg 560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 ggctatgggtattagccttaaagatgcacgtgtggaagtggaaaagatcattggaagggg 586
Query: 561 tagtggatttgtt 573
|||||||||||||
Sbjct: 587 tagtggatttgtt 599
>gnl|LJGI|TC68560 similar to UniRef100_P35100 Cluster: ATP-dependent Clp protease
ATP-binding subunit clpC homolog, chloroplast precursor;
n=1; Pisum sativum|Rep: ATP-dependent Clp protease
ATP-binding subunit clpC homolog, chloroplast precursor
- Pisum sativum (Garden pea), partial (21%)
Length = 645
Score = 327 bits (165), Expect = 6e-89
Identities = 291/333 (87%)
Strand = Plus / Plus
Query: 327 ggctagcagatgcgtaccgaaagccatgtttgagcgtttcacggagaaagcaatcaaagt 386
||||| |||| | ||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 312 ggctaccagaggtgtacccaaagccatgtttgaacgtttcacggagaaagcaatcaaagt 371
Query: 387 gattatgcttgcccaggaggaggcgagacggatgggtcataattttgttgggacggaaca 446
|||||||||||||||||||| || ||||| | ||||| ||||| ||||| || || ||
Sbjct: 372 aattatgcttgcccaggaggaagcaagacgtctcggtcacaatttcgttggaacagagca 431
Query: 447 ggtcctgttgggtcttattggtgaaggcactggtattgctgctaaggttctcaaggctat 506
| | || ||||||||||| |||||||||||||||||||| || |||||||| ||| ||||
Sbjct: 432 gattctattgggtcttataggtgaaggcactggtattgccgccaaggttctaaagtctat 491
Query: 507 gggtattagccttaaagatgcacgtgtggaagtggaaaagatcattggaaggggtagtgg 566
||| || | |||||||||||||||||| |||||||| ||||| |||||||||||||||||
Sbjct: 492 gggaatcaaccttaaagatgcacgtgttgaagtggagaagattattggaaggggtagtgg 551
Query: 567 atttgttgatgttgagattccatttactcctcgtgctaagcgtgttttggaactctcgct 626
|||||||| ||||||||||||||||||||| ||||| |||||||| |||||||| || ||
Sbjct: 552 atttgttgctgttgagattccatttactccccgtgcaaagcgtgtcttggaactttcact 611
Query: 627 ggaggaggctcgtcttcttggtcacaactatat 659
|||||| ||||| | ||||| ||||| |||||
Sbjct: 612 ggaggaagctcgccaacttggacacaattatat 644
Score = 69.9 bits (35), Expect = 2e-11
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 72 aatcatgtctagggttttggctcagtcaatcaatatccctggcctagtggc 122
||||||| |||||||||||||||||||||| ||| |||||| |||||||||
Sbjct: 63 aatcatggctagggttttggctcagtcaattaatgtccctgacctagtggc 113
>gnl|LJGI|TC75882 similar to UniRef100_P35100 Cluster: ATP-dependent Clp protease
ATP-binding subunit clpC homolog, chloroplast precursor;
n=1; Pisum sativum|Rep: ATP-dependent Clp protease
ATP-binding subunit clpC homolog, chloroplast precursor
- Pisum sativum (Garden pea), partial (8%)
Length = 545
Score = 313 bits (158), Expect = 1e-84
Identities = 312/362 (86%), Gaps = 6/362 (1%)
Strand = Plus / Minus
Query: 70 ggaatcatgtctagggttttggctcagtcaatcaatatccctggcctagtggccgggcga 129
|||||||||||||||||||||||||||||||| | |||||||||| ||||| ||||||
Sbjct: 356 ggaatcatgtctagggttttggctcagtcaattactatccctggcttagtgtgtgggcga 297
Query: 130 acgcacggtcgtaataacaggtccacgaagtcgaaaagacctgtcaaaatgatgtatacc 189
| || |||| ||||||||||||||| | ||||| |||| || | |||||||||| ||||
Sbjct: 296 agtcatggtcataataacaggtccacaatgtcgagaagatctctaaaaatgatgtctacc 237
Query: 190 accttgcaagctcctgcactaagattgtcaggtttctcgggcctgcgtagttttaataat 249
|| ||||| ||||| ||||| ||||||| ||||| || ||||||| || |||||||
Sbjct: 236 ---ttacaagcacctgcgttaagaatgtcaggattctcaggactgcgtacttataataat 180
Query: 250 ttggatactatgttgagacctggactagattttcattctaaggtgttcgctactacaact 309
|||||||| ||||||||||||||||||||||||| |||||||||||| | | ||||
Sbjct: 179 ttggatacaatgttgagacctggactagattttcgttctaaggtgtt---tggtgtaact 123
Query: 310 atgtctcgtaaggcgagggctagcagatgcgtaccgaaagccatgtttgagcgtttcacg 369
| || || ||||| ||||||||||||||| |||| ||||||||||||||||||||||||
Sbjct: 122 acctcccgaaaggcaagggctagcagatgcatacctaaagccatgtttgagcgtttcacg 63
Query: 370 gagaaagcaatcaaagtgattatgcttgcccaggaggaggcgagacggatgggtcataat 429
|||||||||||||| || ||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 62 gagaaagcaatcaaggttattatgctttcccaggaggaggcgagacggctgggtcataat 3
Query: 430 tt 431
||
Sbjct: 2 tt 1
>gnl|LJGI|AV406949 similar to UniRef100_P31542 Cluster: ATP-dependent Clp protease
ATP-binding subunit clpA homolog CD4B, chloroplast
precursor; n=1; Solanum lycopersicum|Rep: ATP-dependent
Clp protease ATP-binding subunit clpA homolog CD4B,
chloroplast precursor - Solanum lycopersicum (Tomato)
(Lycopersicon esculentum), partial (16%)
Length = 443
Score = 256 bits (129), Expect = 2e-67
Identities = 174/189 (92%)
Strand = Plus / Plus
Query: 595 cctcgtgctaagcgtgttttggaactctcgctggaggaggctcgtcttcttggtcacaac 654
|||||||| ||||||||| ||||||||| |||||||||||||||| ||||||||||||
Sbjct: 1 cctcgtgcaaagcgtgttccggaactctcactggaggaggctcgtcagcttggtcacaac 60
Query: 655 tatattgggtctgagcacttgcttctgggtcttcttcgagagggggagggtgtagcagca 714
|||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||
Sbjct: 61 tatattgggtctgagcacttgcttttgggtcttcttcgagagggtgagggtgtagcagca 120
Query: 715 cgtgttcttgaaaacctgggggctgatccttctaatattcgctctcaggttattcgcatg 774
||||||||| || ||||||| ||||||||| ||||||||| |||||||||||||||||
Sbjct: 121 cgtgttcttcaagacctgggtgctgatcctaacaatattcgcgctcaggttattcgcatg 180
Query: 775 gttggtgag 783
|||||||||
Sbjct: 181 gttggtgag 189
>gnl|LJGI|TC75634 similar to UniRef100_P35100 Cluster: ATP-dependent Clp protease
ATP-binding subunit clpC homolog, chloroplast precursor;
n=1; Pisum sativum|Rep: ATP-dependent Clp protease
ATP-binding subunit clpC homolog, chloroplast precursor
- Pisum sativum (Garden pea), partial (17%)
Length = 562
Score = 202 bits (102), Expect = 2e-51
Identities = 186/214 (86%)
Strand = Plus / Plus
Query: 327 ggctagcagatgcgtaccgaaagccatgtttgagcgtttcacggagaaagcaatcaaagt 386
||||| |||| | ||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 349 ggctaccagaggtgtacccaaagccatgtttgaacgtttcacggagaaagcaatcaaagt 408
Query: 387 gattatgcttgcccaggaggaggcgagacggatgggtcataattttgttgggacggaaca 446
|||||||||||||||||||| || ||||| | ||||| ||||| ||||| || || ||
Sbjct: 409 aattatgcttgcccaggaggaagcaagacgtctcggtcacaatttcgttggaacagagca 468
Query: 447 ggtcctgttgggtcttattggtgaaggcactggtattgctgctaaggttctcaaggctat 506
| | || ||||||||||| |||||||||||||||||||| || |||||||| ||| ||||
Sbjct: 469 gattctattgggtcttataggtgaaggcactggtattgccgccaaggttctaaagtctat 528
Query: 507 gggtattagccttaaagatgcacgtgtggaagtg 540
||| || | |||||||||||||||||| ||||||
Sbjct: 529 gggaatcaaccttaaagatgcacgtgttgaagtg 562
Score = 69.9 bits (35), Expect = 2e-11
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 72 aatcatgtctagggttttggctcagtcaatcaatatccctggcctagtggc 122
||||||| |||||||||||||||||||||| ||| |||||| |||||||||
Sbjct: 100 aatcatggctagggttttggctcagtcaattaatgtccctgacctagtggc 150
>gnl|LJGI|BW632959 similar to UniRef100_P35100 Cluster: ATP-dependent Clp protease
ATP-binding subunit clpC homolog, chloroplast precursor;
n=1; Pisum sativum|Rep: ATP-dependent Clp protease
ATP-binding subunit clpC homolog, chloroplast precursor
- Pisum sativum (Garden pea), partial (13%)
Length = 476
Score = 117 bits (59), Expect = 1e-25
Identities = 98/111 (88%)
Strand = Plus / Plus
Query: 327 ggctagcagatgcgtaccgaaagccatgtttgagcgtttcacggagaaagcaatcaaagt 386
||||| |||| | ||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 351 ggctaccagaggtgtacccaaagccatgtttgaacgtttcacggagaaagcaatcaaagt 410
Query: 387 gattatgcttgcccaggaggaggcgagacggatgggtcataattttgttgg 437
|||||||||||||||||||| || ||||| | ||||| ||||| |||||
Sbjct: 411 aattatgcttgcccaggaggaagcaagacgtctcggtcacaatttcgttgg 461
Score = 69.9 bits (35), Expect = 2e-11
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 72 aatcatgtctagggttttggctcagtcaatcaatatccctggcctagtggc 122
||||||| |||||||||||||||||||||| ||| |||||| |||||||||
Sbjct: 102 aatcatggctagggttttggctcagtcaattaatgtccctgacctagtggc 152