Miyakogusa Predicted Gene
- Lj1g3v4616550.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4616550.1 Non Chatacterized Hit- tr|I1JPR5|I1JPR5_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,87.7,0,Pec_lyase_C,Pectate lyase/Amb allergen; seg,NULL;
AMBALLERGEN,AmbAllergen; Pectin lyase-like,Pectin ,CUFF.32807.1
(1443 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC71294 similar to UniRef100_Q9SCP2 Cluster: Probable p... 1598 0.0
gnl|LJGI|TC62608 similar to UniRef100_Q9SCP2 Cluster: Probable p... 1112 0.0
gnl|LJGI|TC74545 similar to UniRef100_Q9SCP2 Cluster: Probable p... 252 5e-66
gnl|LJGI|BP047388 similar to UniRef100_Q9SCP2 Cluster: Probable ... 135 9e-31
gnl|LJGI|TC69958 similar to UniRef100_Q27U75 Cluster: Pectate ly... 84 3e-15
gnl|LJGI|FS347931 58 2e-07
gnl|LJGI|TC68598 homologue to UniRef100_Q94FT5 Cluster: Pectate ... 58 2e-07
gnl|LJGI|TC67208 homologue to UniRef100_Q94FT5 Cluster: Pectate ... 58 2e-07
>gnl|LJGI|TC71294 similar to UniRef100_Q9SCP2 Cluster: Probable pectate lyase 12
precursor; n=2; Arabidopsis thaliana|Rep: Probable
pectate lyase 12 precursor - Arabidopsis thaliana
(Mouse-ear cress), partial (41%)
Length = 916
Score = 1598 bits (806), Expect = 0.0
Identities = 806/806 (100%)
Strand = Plus / Plus
Query: 1 atgctgctcctccaaacaacttgcattgtgctcatctctgttctgggcttgttttcacag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111 atgctgctcctccaaacaacttgcattgtgctcatctctgttctgggcttgttttcacag 170
Query: 61 cttggaacagcaatgctgaacctaactctccccggagcacaccctgaccctgaagctgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 cttggaacagcaatgctgaacctaactctccccggagcacaccctgaccctgaagctgtt 230
Query: 121 gctcacgaagttcacaggaaggtgaatgcttcaattgcaagaagggaaatgctggcggtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 gctcacgaagttcacaggaaggtgaatgcttcaattgcaagaagggaaatgctggcggtt 290
Query: 181 tcatgggagaaagatgagtccgcgtgtgcaacagggaaccccattgatgattgctggaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 tcatgggagaaagatgagtccgcgtgtgcaacagggaaccccattgatgattgctggaaa 350
Query: 241 tgcgaccccgactggccgaacaatcgacagaggctagcggactgcgtgatcgggttcggg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 tgcgaccccgactggccgaacaatcgacagaggctagcggactgcgtgatcgggttcggg 410
Query: 301 cagtacgcgaagggaggaaaaggtggggagttttatctggtgacggattcctccgacaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 cagtacgcgaagggaggaaaaggtggggagttttatctggtgacggattcctccgacaac 470
Query: 361 gatgtggttaacccgaaaccggggacgctgaggtatggggtgatacagaatgagcctttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 gatgtggttaacccgaaaccggggacgctgaggtatggggtgatacagaatgagcctttg 530
Query: 421 tggatagtgtttcctagtaatatgatgataaagctgtctcaggagctgatcttcaacagc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 tggatagtgtttcctagtaatatgatgataaagctgtctcaggagctgatcttcaacagc 590
Query: 481 tacaagacaattgatggtcgcggtgctgatgtgcacattgtgggaggagggtgcatcact 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 tacaagacaattgatggtcgcggtgctgatgtgcacattgtgggaggagggtgcatcact 650
Query: 541 ttgcagtatataagcaatgtcatcatacataacattcacattcatcattgtcatccctcg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 ttgcagtatataagcaatgtcatcatacataacattcacattcatcattgtcatccctcg 710
Query: 601 ggtaacacgaacgtgcggtcaagcccagagcactacggttacagaacagaatcggatggt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 ggtaacacgaacgtgcggtcaagcccagagcactacggttacagaacagaatcggatggt 770
Query: 661 gatggaatatccatatttggagcaaaggatatatggatcgaccattgcaccctctcacgg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 771 gatggaatatccatatttggagcaaaggatatatggatcgaccattgcaccctctcacgg 830
Query: 721 tgcaaggacgggctcatcgacgcggtgatgggttccacagggataaccatctccaacaac 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 831 tgcaaggacgggctcatcgacgcggtgatgggttccacagggataaccatctccaacaac 890
Query: 781 tacatgtcccaccacaacgaggtcat 806
||||||||||||||||||||||||||
Sbjct: 891 tacatgtcccaccacaacgaggtcat 916
>gnl|LJGI|TC62608 similar to UniRef100_Q9SCP2 Cluster: Probable pectate lyase 12
precursor; n=2; Arabidopsis thaliana|Rep: Probable
pectate lyase 12 precursor - Arabidopsis thaliana
(Mouse-ear cress), partial (27%)
Length = 697
Score = 1112 bits (561), Expect = 0.0
Identities = 564/565 (99%)
Strand = Plus / Plus
Query: 879 ccaaaacctcgtccagagaatgccccggtgccggaggggctacatccacgtcgttaacaa 938
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccaaaaccttgtccagagaatgccccggtgccggaggggctacatccacgtcgttaacaa 60
Query: 939 tgagttcacccagtgggagatgtacgccatcggcggcagcgggaaccccaccataaatag 998
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgagttcacccagtgggagatgtacgccatcggcggcagcgggaaccccaccataaatag 120
Query: 999 ccaggggaaccgatatagtgcgccttcgaacccttttgctaaggaggttacaaagagggt 1058
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ccaggggaaccgatatagtgcgccttcgaacccttttgctaaggaggttacaaagagggt 180
Query: 1059 agagaccgagaaggataagtggaaagggtggaattggaggtcagaaggtgatgttttggt 1118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agagaccgagaaggataagtggaaagggtggaattggaggtcagaaggtgatgttttggt 240
Query: 1119 gaatggagcattttttgtgacatcaggggaagttcttgaggttaagtacgagaaggctta 1178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gaatggagcattttttgtgacatcaggggaagttcttgaggttaagtacgagaaggctta 300
Query: 1179 cagtgttgaaccgaagtccgctgatcggattgctctgcttaccatgtattcaggtgttct 1238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cagtgttgaaccgaagtccgctgatcggattgctctgcttaccatgtattcaggtgttct 360
Query: 1239 cggtgttgccagggacaataatctgggaatgtggagcagaggacccgaaagtgagggtga 1298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cggtgttgccagggacaataatctgggaatgtggagcagaggacccgaaagtgagggtga 420
Query: 1299 tggcggttcagagtttggcctgatgtactccgacgatatgtcggggggtggaggagcagt 1358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tggcggttcagagtttggcctgatgtactccgacgatatgtcggggggtggaggagcagt 480
Query: 1359 gctaccactacgttcatttccttttactcttggaatgtgcttcttgtcctggaaaataat 1418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gctaccactacgttcatttccttttactcttggaatgtgcttcttgtcctggaaaataat 540
Query: 1419 aataccgttaacatttattctatga 1443
|||||||||||||||||||||||||
Sbjct: 541 aataccgttaacatttattctatga 565
>gnl|LJGI|TC74545 similar to UniRef100_Q9SCP2 Cluster: Probable pectate lyase 12
precursor; n=2; Arabidopsis thaliana|Rep: Probable
pectate lyase 12 precursor - Arabidopsis thaliana
(Mouse-ear cress), partial (36%)
Length = 823
Score = 252 bits (127), Expect = 5e-66
Identities = 471/580 (81%), Gaps = 8/580 (1%)
Strand = Plus / Plus
Query: 63 tggaacagcaatgctgaacctaactctccccggagcacaccctgaccctgaagctgttgc 122
||||| ||||||||||||||| ||||| || || ||| ||||||||||||||||||||
Sbjct: 227 tggaagagcaatgctgaacctcactctgcctggtcaacatcctgaccctgaagctgttgc 286
Query: 123 tcacgaagttcacaggaaggtgaatgcttcaattgcaagaagggaaatgctggcggtttc 182
| ||||||||| |||| |||||||| ||| ||||||| ||||||||||| || || ||
Sbjct: 287 ccgagaagttcactggaaagtgaatgcctcacttgcaaggagggaaatgctagcagtatc 346
Query: 183 atgggagaaagatgagtccgcgtg-tgca--acagggaaccccattgatgattgctggaa 239
|||||||||| || | | ||| |||||||| ||||||||||||||||||||
Sbjct: 347 c---gagaaagatgtctcaacatcatgcctcacagggaatcccattgatgattgctggaa 403
Query: 240 atgcgaccccgactggccgaacaatcgacagaggctagcggactgcgtgatcgggttcgg 299
||||||||| || ||| | ||||| | ||||||||||| ||||||| |||||||||||
Sbjct: 404 atgcgacccagattgggccaacaacaggcagaggctagccgactgcgccatcgggttcgg 463
Query: 300 g-cagtacgcgaagggaggaaaaggtggggagttttatctggtgacggattcctccgaca 358
| ||| ||||||||| || |||||||| | ||||| | || ||||| ||||| |||
Sbjct: 464 gacagg-cgcgaagggtgggaaaggtggtcaattttacatcgtcacggactcctcagacc 522
Query: 359 acgatgtggttaacccgaaaccggggacgctgaggtatggggtgatacagaatgagcctt 418
| ||| ||| ||||||||||| || ||||| | || | ||||| ||||| |||||
Sbjct: 523 atgatccggtgaacccgaaacctggcacgctccgttacgccgtgattcagaacgagccac 582
Query: 419 tgtggatagtgtttcctagtaatatgatgataaagctgtctcaggagctgatcttcaaca 478
||||||| ||||| |||||||| |||||||| ||||| || |||||||| || || ||||
Sbjct: 583 tgtggattgtgttccctagtaacatgatgattaagctttcacaggagcttatatttaaca 642
Query: 479 gctacaagacaattgatggtcgcggtgctgatgtgcacattgtgggaggagggtgcatca 538
|||| ||||| |||||||| || || || |||||||||||||| || ||||| ||||| |
Sbjct: 643 gctataagactattgatgggcgtggagcggatgtgcacattgttgggggaggctgcatta 702
Query: 539 ctttgcagtatataagcaatgtcatcatacataacattcacattcatcattgtcatccct 598
|||||||||| ||||| ||||| ||||| || |||||||| | || || ||||||||||
Sbjct: 703 ctttgcagtacataagtaatgttatcattcacaacattcatgtccaccactgtcatccct 762
Query: 599 cgggtaacacgaacgtgcggtcaagcccagagcactacgg 638
| ||||| || ||||||||||| || ||||||||||||||
Sbjct: 763 ctggtaatactaacgtgcggtcgagtccagagcactacgg 802
>gnl|LJGI|BP047388 similar to UniRef100_Q9SCP2 Cluster: Probable pectate lyase 12
precursor; n=2; Arabidopsis thaliana|Rep: Probable
pectate lyase 12 precursor - Arabidopsis thaliana
(Mouse-ear cress), partial (20%)
Length = 576
Score = 135 bits (68), Expect = 9e-31
Identities = 167/200 (83%)
Strand = Plus / Minus
Query: 400 gtgatacagaatgagcctttgtggatagtgtttcctagtaatatgatgataaagctgtct 459
||||| ||||| ||||| ||||||| ||||| |||||||| |||||||| ||||| ||
Sbjct: 499 gtgattcagaacgagccactgtggattgtgttccctagtaacatgatgattaagctttca 440
Query: 460 caggagctgatcttcaacagctacaagacaattgatggtcgcggtgctgatgtgcacatt 519
|||||||| || || |||||||| ||||| |||||||| || || || ||||||||||||
Sbjct: 439 caggagcttatatttaacagctataagactattgatgggcgtggagcggatgtgcacatt 380
Query: 520 gtgggaggagggtgcatcactttgcagtatataagcaatgtcatcatacataacattcac 579
|| || ||||| ||||| ||||||||||| ||||| ||||| ||||| || ||||||||
Sbjct: 379 gttgggggaggctgcattactttgcagtacataagtaatgttatcattcacaacattcat 320
Query: 580 attcatcattgtcatccctc 599
| || || |||||||||||
Sbjct: 319 gtccaccactgtcatccctc 300
Score = 54.0 bits (27), Expect = 2e-06
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 1250 gggacaataatctgggaatgtggagcagaggaccc 1284
|||||||||||||||| ||||||| ||||||||||
Sbjct: 298 gggacaataatctgggcatgtggaccagaggaccc 264
>gnl|LJGI|TC69958 similar to UniRef100_Q27U75 Cluster: Pectate lyase; n=1; Eucalyptus
globulus subsp. globulus|Rep: Pectate lyase - Eucalyptus
globulus subsp. globulus (Tasmanian blue gum), partial
(38%)
Length = 838
Score = 83.8 bits (42), Expect = 3e-15
Identities = 72/82 (87%)
Strand = Plus / Plus
Query: 934 aacaatgagttcacccagtgggagatgtacgccatcggcggcagcgggaaccccaccata 993
|||||||| ||||| |||||||||||||| |||||||||||||||| |||||||||||
Sbjct: 20 aacaatgatttcacgcagtgggagatgtatgccatcggcggcagcgctaaccccaccatc 79
Query: 994 aatagccaggggaaccgatata 1015
|| |||||| | ||||| ||||
Sbjct: 80 aacagccagagtaaccgttata 101
>gnl|LJGI|FS347931
Length = 654
Score = 58.0 bits (29), Expect = 2e-07
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 1248 cagggacaataatctgggaatgtggagcagaggaccc 1284
|||||||||||||||||| ||||||| ||||||||||
Sbjct: 325 cagggacaataatctgggcatgtggaccagaggaccc 289
>gnl|LJGI|TC68598 homologue to UniRef100_Q94FT5 Cluster: Pectate lyase; n=1; Fragaria x
ananassa|Rep: Pectate lyase - Fragaria ananassa
(Strawberry), partial (40%)
Length = 1173
Score = 58.0 bits (29), Expect = 2e-07
Identities = 101/125 (80%)
Strand = Plus / Plus
Query: 934 aacaatgagttcacccagtgggagatgtacgccatcggcggcagcgggaaccccaccata 993
|||||||| | ||| || ||||||||||| || || || || || || |||||||| ||
Sbjct: 113 aacaatgactacactcactgggagatgtatgctattggtggaagtggtaaccccactatc 172
Query: 994 aatagccaggggaaccgatatagtgcgccttcgaacccttttgctaaggaggttacaaag 1053
|| |||||||| |||||||| | ||| ||| ||||||||||| |||||||| || |||
Sbjct: 173 aacagccagggcaaccgatacaatgctcctcttaacccttttgccaaggaggtgactaag 232
Query: 1054 agggt 1058
|||||
Sbjct: 233 agggt 237
>gnl|LJGI|TC67208 homologue to UniRef100_Q94FT5 Cluster: Pectate lyase; n=1; Fragaria x
ananassa|Rep: Pectate lyase - Fragaria ananassa
(Strawberry), partial (57%)
Length = 1331
Score = 58.0 bits (29), Expect = 2e-07
Identities = 101/125 (80%)
Strand = Plus / Plus
Query: 934 aacaatgagttcacccagtgggagatgtacgccatcggcggcagcgggaaccccaccata 993
|||||||| | ||| || ||||||||||| || || || || || || |||||||| ||
Sbjct: 306 aacaatgactacactcactgggagatgtatgctattggtggaagtggtaaccccactatc 365
Query: 994 aatagccaggggaaccgatatagtgcgccttcgaacccttttgctaaggaggttacaaag 1053
|| |||||||| |||||||| | ||| ||| ||||||||||| |||||||| || |||
Sbjct: 366 aacagccagggcaaccgatacaatgctcctcttaacccttttgccaaggaggtgactaag 425
Query: 1054 agggt 1058
|||||
Sbjct: 426 agggt 430