Miyakogusa Predicted Gene
- Lj1g3v4614460.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4614460.1 Non Chatacterized Hit- tr|A5C6I8|A5C6I8_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,47.86,2e-18,zf-RING_2,Zinc finger, RING-type; no description,Zinc
finger, RING/FYVE/PHD-type; RFWD3 PROTEIN-RELA,CUFF.32857.1
(1245 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59187 weakly similar to UniRef100_A7QJF6 Cluster: Chr... 1031 0.0
gnl|LJGI|BP034655 521 e-147
>gnl|LJGI|TC59187 weakly similar to UniRef100_A7QJF6 Cluster: Chromosome chr8
scaffold_106, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr8 scaffold_106, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (22%)
Length = 857
Score = 1031 bits (520), Expect = 0.0
Identities = 523/524 (99%)
Strand = Plus / Plus
Query: 195 ctacattcccgttgcaccgtcgcatagggtttctcccaacgttcaccagaaccctacctc 254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 ctacattcccgttgcaccgtcgcatagggtttctcccaacgttcaccagaaccctacctc 252
Query: 255 cgactccgttgaagtaatccttatccctgattccgaacagcagaattactctgaagagga 314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 cgactccgttgaagtaatccttatccctgattccgaacagcagaattactctgaagagga 312
Query: 315 tgggaataaacgccggaggatcgaagaaggcgaggctcccacttcgtcactcggcagtca 374
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 tgggaataaacgccggaggatcgaagaaggcgaggctcccacttcgtcactcggcagtca 372
Query: 375 agggaacgagctcaccggcaccgacattgacggcctcgtttgccctatttgcatggacgc 434
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 agggaacgagctcaccggcaccgacattgacggcctcgtttgccctatttgcatggacgc 432
Query: 435 ttggaccaataacggcgaacatcatatctgttgtcttccttgtgggcatgtatatggcat 494
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 ttggaccaataacggcgaacatcatatctgttgtcttccttgtgggcatgtatatggcat 492
Query: 495 gtcttgcatcaataaatggcttcaacatcgaaaaagttccggcaagtgtcctcaatgtaa 554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 gtcttgcatcaataaatggcttcaacatcgaaaaagttccggcaagtgtcctcaatgtaa 552
Query: 555 aagtaaatgctcgttgaaggatgtgaggaaactctacgcttcgcgattagttgctgtaga 614
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 aagtaaatgctcgttgaaggatgtgaggaaactctacgcttcgcgattagttgctgtaga 612
Query: 615 tggaaaccttcataagagaattaggtcacttgaggacaaatgttctggccttgaaagcaa 674
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 613 tggaaaccttcataagagaattaggtcacttgaggacaaatgtgctggccttgaaagcaa 672
Query: 675 ggatggtcaatggaacaagaaagaagctgaatggaagaagagag 718
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 ggatggtcaatggaacaagaaagaagctgaatggaagaagagag 716
Score = 226 bits (114), Expect = 3e-58
Identities = 129/134 (96%)
Strand = Plus / Plus
Query: 663 ccttgaaagcaaggatggtcaatggaacaagaaagaagctgaatggaagaagagagaaac 722
|||| |||| ||||||||| | ||| ||||||||||||||||||||||||||||||||||
Sbjct: 724 ccttcaaagtaaggatggtaattggcacaagaaagaagctgaatggaagaagagagaaac 783
Query: 723 tgtattgtatcatgaagttcagaagctcacagagagaaacacttatttggaacagctgct 782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 784 tgtattgtatcatgaagttcagaagctcacagagagaaacacttatttggaacagctgct 843
Query: 783 actactagatgtgc 796
||||||||||||||
Sbjct: 844 actactagatgtgc 857
Score = 167 bits (84), Expect = 2e-40
Identities = 84/84 (100%)
Strand = Plus / Plus
Query: 1 atggcgagtccgtcggaatttcaccgcaacgaaatcgccgccgcacatctcaccgccgca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 41 atggcgagtccgtcggaatttcaccgcaacgaaatcgccgccgcacatctcaccgccgca 100
Query: 61 gattttggactctccgacgacgat 84
||||||||||||||||||||||||
Sbjct: 101 gattttggactctccgacgacgat 124
>gnl|LJGI|BP034655
Length = 517
Score = 521 bits (263), Expect = e-147
Identities = 263/263 (100%)
Strand = Plus / Plus
Query: 195 ctacattcccgttgcaccgtcgcatagggtttctcccaacgttcaccagaaccctacctc 254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 ctacattcccgttgcaccgtcgcatagggtttctcccaacgttcaccagaaccctacctc 314
Query: 255 cgactccgttgaagtaatccttatccctgattccgaacagcagaattactctgaagagga 314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 cgactccgttgaagtaatccttatccctgattccgaacagcagaattactctgaagagga 374
Query: 315 tgggaataaacgccggaggatcgaagaaggcgaggctcccacttcgtcactcggcagtca 374
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 tgggaataaacgccggaggatcgaagaaggcgaggctcccacttcgtcactcggcagtca 434
Query: 375 agggaacgagctcaccggcaccgacattgacggcctcgtttgccctatttgcatggacgc 434
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 agggaacgagctcaccggcaccgacattgacggcctcgtttgccctatttgcatggacgc 494
Query: 435 ttggaccaataacggcgaacatc 457
|||||||||||||||||||||||
Sbjct: 495 ttggaccaataacggcgaacatc 517
Score = 167 bits (84), Expect = 2e-40
Identities = 84/84 (100%)
Strand = Plus / Plus
Query: 1 atggcgagtccgtcggaatttcaccgcaacgaaatcgccgccgcacatctcaccgccgca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atggcgagtccgtcggaatttcaccgcaacgaaatcgccgccgcacatctcaccgccgca 120
Query: 61 gattttggactctccgacgacgat 84
||||||||||||||||||||||||
Sbjct: 121 gattttggactctccgacgacgat 144