Miyakogusa Predicted Gene

Lj1g3v4604360.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v4604360.2 tr|A7RL08|A7RL08_NEMVE Predicted protein
(Fragment) OS=Nematostella vectensis GN=v1g85406 PE=4
SV=1,31.72,3e-16,WD40 repeat-like,WD40-repeat-containing domain; no
description,WD40/YVTN repeat-like-containing doma,CUFF.32813.2
         (1149 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC68723                                                      660   0.0  

>gnl|LJGI|TC68723 
          Length = 659

 Score =  660 bits (333), Expect = 0.0
 Identities = 333/333 (100%)
 Strand = Plus / Plus

                                                                        
Query: 817  caagttattggacaaggagtacagggctgtcatgtcttgttcaagggaatgggcagtcat 876
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    caagttattggacaaggagtacagggctgtcatgtcttgttcaagggaatgggcagtcat 60

                                                                        
Query: 877  catttccagaagacgggttccacacatgcggatgtgagtaaaagtctactacctaaatgt 936
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   catttccagaagacgggttccacacatgcggatgtgagtaaaagtctactacctaaatgt 120

                                                                        
Query: 937  gtaattatagacatggagaatcagagtagattgtttgcatctagagatgaagttacaaat 996
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  gtaattatagacatggagaatcagagtagattgtttgcatctagagatgaagttacaaat 180

                                                                        
Query: 997  gatttggtcttgtacgagttgccatcttttagagttcatcagcaattcaaaatgccagct 1056
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  gatttggtcttgtacgagttgccatcttttagagttcatcagcaattcaaaatgccagct 240

                                                                        
Query: 1057 cagtcccgtgatgttaggtactcaactagccattgggcacttggttgtttaagtgagaac 1116
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  cagtcccgtgatgttaggtactcaactagccattgggcacttggttgtttaagtgagaac 300

                                             
Query: 1117 tcagtacaacttttccatgccaaattctcgtaa 1149
            |||||||||||||||||||||||||||||||||
Sbjct: 301  tcagtacaacttttccatgccaaattctcgtaa 333