Miyakogusa Predicted Gene

Lj1g3v4604360.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v4604360.1 Non Chatacterized Hit- tr|E7FGP7|E7FGP7_DANRE
Uncharacterized protein OS=Danio rerio PE=4 SV=1,24.12,2e-17,WD40
repeat-like,WD40-repeat-containing domain; RING/U-box,NULL; no
description,Zinc finger, RING/FY,CUFF.32813.1
         (1599 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC59187 weakly similar to UniRef100_A7QJF6 Cluster: Chr...   850   0.0  
gnl|LJGI|TC68723                                                      660   0.0  
gnl|LJGI|BP034655                                                      62   1e-08

>gnl|LJGI|TC59187 weakly similar to UniRef100_A7QJF6 Cluster: Chromosome chr8
           scaffold_106, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr8 scaffold_106, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (22%)
          Length = 857

 Score =  850 bits (429), Expect = 0.0
 Identities = 432/433 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggacgcttggaccaataacggcgaacatcatatctgttgtcttccttgtgggcatgta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 atggacgcttggaccaataacggcgaacatcatatctgttgtcttccttgtgggcatgta 484

                                                                       
Query: 61  tatggcatgtcttgcatcaataaatggcttcaacatcgaaaaagttccggcaagtgtcct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 tatggcatgtcttgcatcaataaatggcttcaacatcgaaaaagttccggcaagtgtcct 544

                                                                       
Query: 121 caatgtaaaagtaaatgctcgttgaaggatgtgaggaaactctacgcttcgcgattagtt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 caatgtaaaagtaaatgctcgttgaaggatgtgaggaaactctacgcttcgcgattagtt 604

                                                                       
Query: 181 gctgtagatggaaaccttcataagagaattaggtcacttgaggacaaatgttctggcctt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 605 gctgtagatggaaaccttcataagagaattaggtcacttgaggacaaatgtgctggcctt 664

                                                                       
Query: 241 gaaagcaaggatggtcaatggaacaagaaagaagctgaatggaagaagagagtagctacc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 gaaagcaaggatggtcaatggaacaagaaagaagctgaatggaagaagagagtagctacc 724

                                                                       
Query: 301 cttcaaagtaaggatggtaattggcacaagaaagaagctgaatggaagaagagagaaact 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 cttcaaagtaaggatggtaattggcacaagaaagaagctgaatggaagaagagagaaact 784

                                                                       
Query: 361 gtattgtatcatgaagttcagaagctcacagagagaaacacttatttggaacagctgcta 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 785 gtattgtatcatgaagttcagaagctcacagagagaaacacttatttggaacagctgcta 844

                        
Query: 421 ctactagatgtgc 433
           |||||||||||||
Sbjct: 845 ctactagatgtgc 857


>gnl|LJGI|TC68723 
          Length = 659

 Score =  660 bits (333), Expect = 0.0
 Identities = 333/333 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1267 caagttattggacaaggagtacagggctgtcatgtcttgttcaagggaatgggcagtcat 1326
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    caagttattggacaaggagtacagggctgtcatgtcttgttcaagggaatgggcagtcat 60

                                                                        
Query: 1327 catttccagaagacgggttccacacatgcggatgtgagtaaaagtctactacctaaatgt 1386
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   catttccagaagacgggttccacacatgcggatgtgagtaaaagtctactacctaaatgt 120

                                                                        
Query: 1387 gtaattatagacatggagaatcagagtagattgtttgcatctagagatgaagttacaaat 1446
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  gtaattatagacatggagaatcagagtagattgtttgcatctagagatgaagttacaaat 180

                                                                        
Query: 1447 gatttggtcttgtacgagttgccatcttttagagttcatcagcaattcaaaatgccagct 1506
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  gatttggtcttgtacgagttgccatcttttagagttcatcagcaattcaaaatgccagct 240

                                                                        
Query: 1507 cagtcccgtgatgttaggtactcaactagccattgggcacttggttgtttaagtgagaac 1566
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  cagtcccgtgatgttaggtactcaactagccattgggcacttggttgtttaagtgagaac 300

                                             
Query: 1567 tcagtacaacttttccatgccaaattctcgtaa 1599
            |||||||||||||||||||||||||||||||||
Sbjct: 301  tcagtacaacttttccatgccaaattctcgtaa 333


>gnl|LJGI|BP034655 
          Length = 517

 Score = 61.9 bits (31), Expect = 1e-08
 Identities = 31/31 (100%)
 Strand = Plus / Plus

                                          
Query: 1   atggacgcttggaccaataacggcgaacatc 31
           |||||||||||||||||||||||||||||||
Sbjct: 487 atggacgcttggaccaataacggcgaacatc 517