Miyakogusa Predicted Gene
- Lj1g3v4591220.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4591220.1 Non Chatacterized Hit- tr|B9S0G9|B9S0G9_RICCO
Multidrug resistance protein 1, 2, putative
OS=Ricinus,82.56,0,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
ABC_TRANSPORTER_1,ABC transporter, conserved site; ,CUFF.32792.1
(2922 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC78233 similar to UniRef100_Q2V606 Cluster: ABC transp... 1251 0.0
gnl|LJGI|TC78998 similar to UniRef100_A7QJG9 Cluster: Chromosome... 995 0.0
gnl|LJGI|BP042979 homologue to UniRef100_Q9ZR72 Cluster: Multidr... 394 e-108
gnl|LJGI|TC64957 similar to UniRef100_A7P469 Cluster: Chromosome... 62 2e-08
>gnl|LJGI|TC78233 similar to UniRef100_Q2V606 Cluster: ABC transporter-like protein;
n=1; Brassica rapa|Rep: ABC transporter-like protein -
Brassica campestris (Field mustard), partial (19%)
Length = 762
Score = 1251 bits (631), Expect = 0.0
Identities = 651/655 (99%), Gaps = 2/655 (0%)
Strand = Plus / Plus
Query: 1885 gtttcagaaattggaactcatgatgagctcttttccaaaggtgaaaatggagtatatgcc 1944
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108 gtttcagaaattggaactcatgatgagctcttttccaaaggtgaaaatggagtatatgcc 167
Query: 1945 aagcttataaagatgcaggagatggcacatgaaactgccatgaataatgccagaaagagt 2004
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 168 aagcttataaagatgcaggagatggcacatgaaactgccatgaataatgccagaaagagt 227
Query: 2005 agtgcacggc-cttcaagtgccagaaactcagtaagctcacccataattgctcggaattc 2063
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 agtgcacggctcttcaagtgccagaaactcagtaagctcacccataattgctcggaattc 287
Query: 2064 ttcttatggccggtcaccatactcgcgcaggctgtctgatttttccacatctgcttttag 2123
|||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||
Sbjct: 288 ttcttatggccggtcaccatactcgcgcaggctgtctgatttctccacatctgattttag 347
Query: 2124 tctctcccttgatgcatcacatccaaattacaggcatgaaaagcttcccttcaaagaaca 2183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 tctctcccttgatgcatcacatccaaattacaggcatgaaaagcttcccttcaaagaaca 407
Query: 2184 agcaagttccttttggagacttgcaaaaatgaactctcctgaatggctttatgctttgat 2243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 agcaagttccttttggagacttgcaaaaatgaactctcctgaatggctttatgctttgat 467
Query: 2244 tggctctataggctctattgtttgtggatccctcagtgcattctttgcttatgttcttag 2303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 tggctctataggctctattgtttgtggatccctcagtgcattctttgcttatgttcttag 527
Query: 2304 cgctgtcc-ttagtgtctattacagtccagaccacagacacatgatccgcgaaattgaaa 2362
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 cgctgtcctttagtgtctattacagtccagaccacagacacatgatccgcgaaattgaaa 587
Query: 2363 agtactgctacttgttgattgggctgtcatcaactgcacttctcttcaacacattgcaac 2422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 agtactgctacttgttgattgggctgtcatcaactgcacttctcttcaacacattgcaac 647
Query: 2423 acttcttctgggatattgttggggagaatcttactaaaagagtgagggaaaaaatgctga 2482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 648 acttcttctgggatattgttggggagaatcttactaaaagagtgagggaaaaaatgctga 707
Query: 2483 cggcggtgctcaaaaatgaaatggcatggtttgatcaggaggaaaatgaaagtgc 2537
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 708 cggcggtgctcaaaaatgaaatggcatggtttgatcaggaggaaaatgaaagtgc 762
Score = 117 bits (59), Expect = 4e-25
Identities = 59/59 (100%)
Strand = Plus / Plus
Query: 1826 aggaagcccttgacaggttcatgattggcagaacaactcttgtaattgcgcatcgcctc 1884
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aggaagcccttgacaggttcatgattggcagaacaactcttgtaattgcgcatcgcctc 59
>gnl|LJGI|TC78998 similar to UniRef100_A7QJG9 Cluster: Chromosome chr8 scaffold_106,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_106, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (8%)
Length = 510
Score = 995 bits (502), Expect = 0.0
Identities = 508/510 (99%)
Strand = Plus / Plus
Query: 7 ccagattctgaagagataaagactattgagcagtggaaatggtctgaaatgcaaggcctt 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccagattctgaagagataaagactattgagcagtggaaatggtctgaaatgcaaggcctt 60
Query: 67 gagcttgtgaatgatgattctgctgccacaaaaccaatggaaacaggggactctgtttcc 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gagcttgtgaatgatgattctgctgccacaaaaccaatggaaacaggggactctgtttcc 120
Query: 127 aaaacagagcactctgtttctaaaacagaggagggtccttcttcttcttctcaagttgag 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaaacagagcactctgtttctaaaacagaggagggtccttcttcttcttctcaagttgag 180
Query: 187 gttctaaaggaaatggagaactctgaacctgtcaaaaatggttctgtcagtggtggagag 246
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gttctaaagaaaatggagaactctgaacctgtcaaaaatggttctgtcagtggtggagag 240
Query: 247 aagcatgaggctcttccctctgttgggttcttggagcttttcagatttgctgatgggttg 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aagcatgaggctcttccctctgttgggttcttggagcttttcagatttgctgatgggttg 300
Query: 307 gattgcattctcatgacaattggaacttttggagcaattgttcatggttgttctttgcct 366
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 301 gattgcattctcatgacaattggaacttttggagcaattgttcatggtcgttctttgcct 360
Query: 367 ttgtttcttcggttctttgcggatcttgtgaactcttttgggtccaatgctaataacttg 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ttgtttcttcggttctttgcggatcttgtgaactcttttgggtccaatgctaataacttg 420
Query: 427 gacaagatgacccaggaagttgtcaagtatgcattttacttcttggtggttggtgctgct 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gacaagatgacccaggaagttgtcaagtatgcattttacttcttggtggttggtgctgct 480
Query: 487 atatgggcatcttcatgggcagagatttca 516
||||||||||||||||||||||||||||||
Sbjct: 481 atatgggcatcttcatgggcagagatttca 510
>gnl|LJGI|BP042979 homologue to UniRef100_Q9ZR72 Cluster: Multidrug resistance protein
1; n=2; Arabidopsis thaliana|Rep: Multidrug resistance
protein 1 - Arabidopsis thaliana (Mouse-ear cress),
partial (13%)
Length = 499
Score = 394 bits (199), Expect = e-108
Identities = 199/199 (100%)
Strand = Plus / Plus
Query: 2724 gcagaaaatgttcatgactggtttttctggtgacctggaagctgctcatgtcaaggctac 2783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcagaaaatgttcatgactggtttttctggtgacctggaagctgctcatgtcaaggctac 60
Query: 2784 acaactagctggggaggctatagccaatgtaagaactgttgcagccttcaattcagaagc 2843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 acaactagctggggaggctatagccaatgtaagaactgttgcagccttcaattcagaagc 120
Query: 2844 aaaaattgttggccttttcacctcaaaccttgaagctcccttacaaaggtgcttttggaa 2903
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaaaattgttggccttttcacctcaaaccttgaagctcccttacaaaggtgcttttggaa 180
Query: 2904 ggggcagatttctggaagt 2922
|||||||||||||||||||
Sbjct: 181 ggggcagatttctggaagt 199
>gnl|LJGI|TC64957 similar to UniRef100_A7P469 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (12%)
Length = 734
Score = 61.9 bits (31), Expect = 2e-08
Identities = 88/107 (82%)
Strand = Plus / Plus
Query: 1690 ggagaaagagggctgcaactttctggagggcaaaaacagcgaatagcaatagcaagggca 1749
|||||||||||| |||| || ||||||||||| || ||| | |||||||| || | |||
Sbjct: 132 ggagaaagaggggtgcagctctctggagggcagaagcagaggatagcaattgctcgagca 191
Query: 1750 atgcttaaaaacccagcaattcttctcctagatgaggcaacaagtgc 1796
||||| || || ||| |||| ||||| ||||||||||||| |||||
Sbjct: 192 atgctcaagaatccatcaatccttctgttagatgaggcaacgagtgc 238