Miyakogusa Predicted Gene
- Lj1g3v4590980.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4590980.1 Non Chatacterized Hit- tr|I3SZY3|I3SZY3_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,97.94,0,coiled-coil,NULL; TRANSLIN,NULL; TRANSLIN AND TRANSLIN
ASSOCIATED PROTEIN X,Translin; no description,CUFF.32783.1
(897 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC63279 similar to UniRef100_A7PT54 Cluster: Chromosome... 1445 0.0
gnl|LJGI|CN825289 weakly similar to UniRef100_A7PT54 Cluster: Ch... 823 0.0
gnl|LJGI|BP033591 homologue to UniRef100_A7PT54 Cluster: Chromos... 537 e-152
>gnl|LJGI|TC63279 similar to UniRef100_A7PT54 Cluster: Chromosome chr8 scaffold_29,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_29, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (68%)
Length = 1154
Score = 1445 bits (729), Expect = 0.0
Identities = 732/733 (99%)
Strand = Plus / Plus
Query: 165 aatggctggcgttgacggctcattgtcggcggcgccaccgtcccctacccagtctcttga 224
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 aatggctggcgttgacggctcattgtcggcggcgccaccgtcccctacccagtctcttga 251
Query: 225 gaagcagttcgacgtgttcaaggctcagttggaggaatcaggaacactgcgagagcggat 284
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 gaagcagttcgacgtgttcaaggctcagttggaggaatcaggaacactgcgagagcggat 311
Query: 285 tcgacacgttgtctcagagatcgagtctactacaagggtcatgtatgctagccttcttct 344
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 tcgacacgttgtctcagagatcgagtctactacaagggtcatgtatgctagccttcttct 371
Query: 345 ggttcaccagtctcgccccactcccgagcttttagagaaggccaagtctcagatagatgt 404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 ggttcaccagtctcgccccactcccgagcttttagagaaggccaagtctcagatagatgt 431
Query: 405 gctgaaggagaagtacaatcaacttgctgaaattcttggagaacacccgggacaatacta 464
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 gctgaaggagaagtacaagcaacttgctgaaattcttggagaacacccgggacaatacta 491
Query: 465 taggtaccatggtgattggaggagtgagacgcagactgtagtttcgctgcttactttaat 524
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 taggtaccatggtgattggaggagtgagacgcagactgtagtttcgctgcttactttaat 551
Query: 525 gcactggcttgaaacaggaagccttctcgagcacaatgacgctcaggaaaaacttggctt 584
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 gcactggcttgaaacaggaagccttctcgagcacaatgacgctcaggaaaaacttggctt 611
Query: 585 gaatggtccagagttcagtctagacattgaagactacctagtaggtgtatgttttatgtc 644
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 gaatggtccagagttcagtctagacattgaagactacctagtaggtgtatgttttatgtc 671
Query: 645 taatgaattgccaaggtatgtggtgaatcaagtgacagctggggactatgattgtccaag 704
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 taatgaattgccaaggtatgtggtgaatcaagtgacagctggggactatgattgtccaag 731
Query: 705 gaaggtcttaaagttcttaactgatctccatgctgcattccgtatgcttaatcttcgaaa 764
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 gaaggtcttaaagttcttaactgatctccatgctgcattccgtatgcttaatcttcgaaa 791
Query: 765 tgattttctgcggaaaaagtttgatggcatgaaatatgacttaagaaaagtagaggaagt 824
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 792 tgattttctgcggaaaaagtttgatggcatgaaatatgacttaagaaaagtagaggaagt 851
Query: 825 gtactatgatgttaagatcagaggtttgtcatcaaatggtgagtcagttggagatcaagg 884
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 852 gtactatgatgttaagatcagaggtttgtcatcaaatggtgagtcagttggagatcaagg 911
Query: 885 aattgaaggataa 897
|||||||||||||
Sbjct: 912 aattgaaggataa 924
Score = 198 bits (100), Expect = 4e-50
Identities = 100/100 (100%)
Strand = Plus / Plus
Query: 1 atgcaatatatgaaaccggcgtttcgaaacgccacctactgcttcaccttctctcgctcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28 atgcaatatatgaaaccggcgtttcgaaacgccacctactgcttcaccttctctcgctcc 87
Query: 61 ttcaccttcaccttaaaccctaaccccttcatcctccttt 100
||||||||||||||||||||||||||||||||||||||||
Sbjct: 88 ttcaccttcaccttaaaccctaaccccttcatcctccttt 127
>gnl|LJGI|CN825289 weakly similar to UniRef100_A7PT54 Cluster: Chromosome chr8
scaffold_29, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr8 scaffold_29, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (39%)
Length = 793
Score = 823 bits (415), Expect = 0.0
Identities = 418/419 (99%)
Strand = Plus / Plus
Query: 165 aatggctggcgttgacggctcattgtcggcggcgccaccgtcccctacccagtctcttga 224
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 50 aatggctggcgttgacggctcattgtcggcggcgccaccgtcccctacccagtctcttga 109
Query: 225 gaagcagttcgacgtgttcaaggctcagttggaggaatcaggaacactgcgagagcggat 284
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 gaagcagttcgacgtgttcaaggctcagttggaggaatcaggaacactgcgagagcggat 169
Query: 285 tcgacacgttgtctcagagatcgagtctactacaagggtcatgtatgctagccttcttct 344
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 tcgacacgttgtctcagagatcgagtctactacaagggtcatgtatgctagccttcttct 229
Query: 345 ggttcaccagtctcgccccactcccgagcttttagagaaggccaagtctcagatagatgt 404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 ggttcaccagtctcgccccactcccgagcttttagagaaggccaagtctcagatagatgt 289
Query: 405 gctgaaggagaagtacaatcaacttgctgaaattcttggagaacacccgggacaatacta 464
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 gctgaaggagaagtacaagcaacttgctgaaattcttggagaacacccgggacaatacta 349
Query: 465 taggtaccatggtgattggaggagtgagacgcagactgtagtttcgctgcttactttaat 524
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 taggtaccatggtgattggaggagtgagacgcagactgtagtttcgctgcttactttaat 409
Query: 525 gcactggcttgaaacaggaagccttctcgagcacaatgacgctcaggaaaaacttggct 583
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 gcactggcttgaaacaggaagccttctcgagcacaatgacgctcaggaaaaacttggct 468
>gnl|LJGI|BP033591 homologue to UniRef100_A7PT54 Cluster: Chromosome chr8 scaffold_29,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_29, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (24%)
Length = 474
Score = 537 bits (271), Expect = e-152
Identities = 271/271 (100%)
Strand = Plus / Minus
Query: 627 aggtgtatgttttatgtctaatgaattgccaaggtatgtggtgaatcaagtgacagctgg 686
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 aggtgtatgttttatgtctaatgaattgccaaggtatgtggtgaatcaagtgacagctgg 373
Query: 687 ggactatgattgtccaaggaaggtcttaaagttcttaactgatctccatgctgcattccg 746
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 ggactatgattgtccaaggaaggtcttaaagttcttaactgatctccatgctgcattccg 313
Query: 747 tatgcttaatcttcgaaatgattttctgcggaaaaagtttgatggcatgaaatatgactt 806
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 tatgcttaatcttcgaaatgattttctgcggaaaaagtttgatggcatgaaatatgactt 253
Query: 807 aagaaaagtagaggaagtgtactatgatgttaagatcagaggtttgtcatcaaatggtga 866
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 aagaaaagtagaggaagtgtactatgatgttaagatcagaggtttgtcatcaaatggtga 193
Query: 867 gtcagttggagatcaaggaattgaaggataa 897
|||||||||||||||||||||||||||||||
Sbjct: 192 gtcagttggagatcaaggaattgaaggataa 162