Miyakogusa Predicted Gene

Lj1g3v4590970.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v4590970.1 tr|B9MTD3|B9MTD3_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_781096 PE=4 SV=1,36.11,0.021,
,CUFF.32779.1
         (247 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO011576 similar to UniRef100_Q2V3K2 Cluster: Uncharact...   482   e-136

>gnl|LJGI|GO011576 similar to UniRef100_Q2V3K2 Cluster: Uncharacterized protein
           At4g08875.1; n=1; Arabidopsis thaliana|Rep:
           Uncharacterized protein At4g08875.1 - Arabidopsis
           thaliana (Mouse-ear cress), partial (17%)
          Length = 551

 Score =  482 bits (243), Expect = e-136
 Identities = 246/247 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaagatcacagcaatttttctagcaattttagtgctgagctctagcttgggtgagtca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 32  atgaagatcacagcaatttttctagcaattttagtgctgagctctagcttgggtgagtca 91

                                                                       
Query: 61  agggccttggggttaggtgggatatatggtcaagagcagagaaaccgaaggggaaaagta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92  agggccttggggttaggtgggatatatggtcaagagcagagaaaccgaaggggaaaagta 151

                                                                       
Query: 121 atagaaagcattgagagtgaaaacatgaatcccaataacccacaaggtagtgctgaaagt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 atagaaagcattgagagtgaaaacatgaatcccaataacccacaaggtagtgctgaaagt 211

                                                                       
Query: 181 gcaaatcaccatgtcaagccaaaagaaaaagcgaatgcaactcttcaagaaaatgatggg 240
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 212 gcaaatcaccatgtcaagccaagagaaaaagcgaatgcaactcttcaagaaaatgatggg 271

                  
Query: 241 aattgaa 247
           |||||||
Sbjct: 272 aattgaa 278