Miyakogusa Predicted Gene
- Lj1g3v4590910.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4590910.1 Non Chatacterized Hit- tr|H9W5N9|H9W5N9_PINTA
Uncharacterized protein (Fragment) OS=Pinus taeda
GN=0,33.1,0.00000000000001,coiled-coil,NULL; seg,NULL,CUFF.32781.1
(1393 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS325622 similar to UniRef100_A7PT51 Cluster: Chromosom... 1148 0.0
gnl|LJGI|BP037440 similar to UniRef100_A7PT51 Cluster: Chromosom... 507 e-143
gnl|LJGI|TC75089 weakly similar to UniRef100_A7PT51 Cluster: Chr... 361 8e-99
>gnl|LJGI|FS325622 similar to UniRef100_A7PT51 Cluster: Chromosome chr8 scaffold_29,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_29, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (30%)
Length = 794
Score = 1148 bits (579), Expect = 0.0
Identities = 585/587 (99%)
Strand = Plus / Plus
Query: 134 gcaccgtcgtcgaaaacggcacctcccatgtcacctccttcatcgaccgcgatccctctc 193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 gcaccgtcgtcgaaaacggcacctcccatgtcacctccttcatcgaccgcgatccctctc 267
Query: 194 ttcgcgccctcctctcccgcctcgacctcgccggaaacggaaacggaaactccaaccgcc 253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 ttcgcgccctcctctcccgcctcgacctcgccggaaacggaaacggaaactccaaccgcc 327
Query: 254 ctcacgatcaccactcaccttctcactccccccgccgccgcccctttcttcatctcaccc 313
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 ctcacgaccaccactcaccttctcactccccccgccgccgcccctttcttcatctcaccc 387
Query: 314 gcgtcggaaccctagacgacgacttcttctccggcgacgacgacgacggccgctccctct 373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 gcgtcggaaccctagacgacgacttcttctccggcgacgacgacgacggccgctccctct 447
Query: 374 tcggctcatcccctaaaccacctctcaacgcaactctcctcgcgttgggaccgttccgct 433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 tcggctcatcccctaaaccacctctcaacgcaactctcctcgcgttgggaccgttccgct 507
Query: 434 tctccgatcccgtcgccgatgacggtgttagggtttccggggttgtccgtcccggaacca 493
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 tctccgatcccgtcgccgatgacggtgttagggtttccggggttgtccgtcccggaacca 567
Query: 494 cgtttaaagctgagggactcgacggcgataatcacgaggtggagcaagaaaaccaggagg 553
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 cgtttaaagctgagggactcgacggcgataatcacgaggtggagcaagaaaaccaggagg 627
Query: 554 aggagatgaagaacggtttggggaatgggcaagaaatggagaagggtgtggacttgcgat 613
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 aggagatgaagaacgatttggggaatgggcaagaaatggagaagggtgtggacttgcgat 687
Query: 614 tctttgtgaaggggttggaggtgggtcatcgtgacgcggcggcgctgttttttctggtga 673
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 tctttgtgaaggggttggaggtgggtcatcgtgacgcggcggcgctgttttttctggtga 747
Query: 674 gtttcttgtctgctgcttatggatgggtgattcttgtgtttctggtg 720
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 gtttcttgtctgctgcttatggatgggtgattcttgtgtttctggtg 794
Score = 93.7 bits (47), Expect = 3e-18
Identities = 47/47 (100%)
Strand = Plus / Plus
Query: 1 atgagcgacgatctgattcctccacggttgctgaatctccgttcaac 47
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 atgagcgacgatctgattcctccacggttgctgaatctccgttcaac 121
>gnl|LJGI|BP037440 similar to UniRef100_A7PT51 Cluster: Chromosome chr8 scaffold_29,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_29, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 344
Score = 507 bits (256), Expect = e-143
Identities = 286/291 (98%), Gaps = 5/291 (1%)
Strand = Plus / Plus
Query: 1102 aggagtggaagggagattgtgaaggaaggttgttatttgatatcgaccatgttcaaccaa 1161
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aggagtggaagggagattgtgaaggaaggttgttatttgatatcgaccatgttcaaccaa 60
Query: 1162 gctatacagataaaatgcttggaggcggtgctttgcgggtcgtttgtgagatggggtttg 1221
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gctatacagataaaatgcttggaggcggtgctttgcgggtcgtttgtgagatggggtttg 120
Query: 1222 -agcaggatttg-cgggagaacttttgccaagatgtttcagtcgaccatggaggtttac- 1278
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 nagcaggatttgncgggagaacttttgccaagatgtttcagtcgaccatggaggtttacn 180
Query: 1279 -ttcatggttacttggcttgtgttctactttgcggctaggtgtagggatgctaatctgca 1337
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 nttcatggttacttggcttgtgttctactttgcggctaggtgtagggatgctaatctgca 240
Query: 1338 aggtaggaggtttggtcagagagaattggaaggctt-gattgatggtcaca 1387
|||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 241 aggtaggaggtttggtcagagagaattggaaggcttngattgatggtcaca 291
>gnl|LJGI|TC75089 weakly similar to UniRef100_A7PT51 Cluster: Chromosome chr8
scaffold_29, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr8 scaffold_29, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (20%)
Length = 1023
Score = 361 bits (182), Expect = 8e-99
Identities = 185/186 (99%)
Strand = Plus / Plus
Query: 1208 tgagatggggtttgagcaggatttgcgggagaacttttgccaagatgtttcagtcgacca 1267
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106 tgagatggggtttgagcaggatttgcgggagaacttttgccaagatgtttcagtcgacca 165
Query: 1268 tggaggtttacttcatggttacttggcttgtgttctactttgcggctaggtgtagggatg 1327
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 tggaggtttacttcatggttacttggcttgtgttctactttgcggctaggtgtagggatg 225
Query: 1328 ctaatctgcaaggtaggaggtttggtcagagagaattggaaggcttgattgatggtcaca 1387
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 226 ctaatctgcaaggtaggaggtttggtcagagagacttggaaggcttgattgatggtcaca 285
Query: 1388 gatgat 1393
||||||
Sbjct: 286 gatgat 291
Score = 226 bits (114), Expect = 3e-58
Identities = 114/114 (100%)
Strand = Plus / Plus
Query: 749 tcgttgctgttgtgaatgatctggtagggaggtttagctcggttactgggttggtttggg 808
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcgttgctgttgtgaatgatctggtagggaggtttagctcggttactgggttggtttggg 60
Query: 809 atggttcaagattaggtctcaagaggctttcagggtttattctcatgagatggg 862
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atggttcaagattaggtctcaagaggctttcagggtttattctcatgagatggg 114