Miyakogusa Predicted Gene
- Lj1g3v4590860.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4590860.2 Non Chatacterized Hit- tr|I1JPN1|I1JPN1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.42766
PE,61.12,0,ZF_PHD_1,Zinc finger, PHD-type, conserved site; PHD zinc
finger,Zinc finger, PHD-type; Chromatin org,CUFF.32809.2
(4947 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|DC597682 similar to UniRef100_A8IVE5 Cluster: SNF2 fami... 1144 0.0
gnl|LJGI|BP052275 767 0.0
gnl|LJGI|TC70193 563 e-159
gnl|LJGI|BP033618 543 e-153
>gnl|LJGI|DC597682 similar to UniRef100_A8IVE5 Cluster: SNF2 family
chromodomain-helicase; n=1; Chlamydomonas
reinhardtii|Rep: SNF2 family, partial (0%)
Length = 577
Score = 1144 bits (577), Expect = 0.0
Identities = 577/577 (100%)
Strand = Plus / Plus
Query: 479 ggaaactgcaggttgtcagttggagaagacattggagtaaacctcagcgcttactactaa 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggaaactgcaggttgtcagttggagaagacattggagtaaacctcagcgcttactactaa 60
Query: 539 aaagggcaattgttttaccaaagcaaaatgatcaacattttgatgcgcacaaacacaatg 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaagggcaattgttttaccaaagcaaaatgatcaacattttgatgcgcacaaacacaatg 120
Query: 599 gcaaagatttagcttaccgttatgagtggcttgtaaaatggaccggtcttggttatgaac 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gcaaagatttagcttaccgttatgagtggcttgtaaaatggaccggtcttggttatgaac 180
Query: 659 aagttacatgggagttagatgatgcttcatttatgacatcatctgaaggcattaaactca 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aagttacatgggagttagatgatgcttcatttatgacatcatctgaaggcattaaactca 240
Query: 719 tagatgattacgaatgtcgtcttaagagagcagacagactgtcaaatcctttcgaagcta 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagatgattacgaatgtcgtcttaagagagcagacagactgtcaaatcctttcgaagcta 300
Query: 779 aggagagaaaagcttctcttgctgaattatcagtgccagcatctggagatttaccaggac 838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aggagagaaaagcttctcttgctgaattatcagtgccagcatctggagatttaccaggac 360
Query: 839 tttataaccagcatttgagttatgtgaccaagcttcacatgtgttggcacaaaggacaga 898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tttataaccagcatttgagttatgtgaccaagcttcacatgtgttggcacaaaggacaga 420
Query: 899 atgctcttattttagaggatcaaattgaccaggagcgggttatgaaggtgattttgttta 958
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atgctcttattttagaggatcaaattgaccaggagcgggttatgaaggtgattttgttta 480
Query: 959 tactatctttgaatcataatgtgaagaggccttttctcatcatcacaacttcttctggcc 1018
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tactatctttgaatcataatgtgaagaggccttttctcatcatcacaacttcttctggcc 540
Query: 1019 tcactgtatgggaaacagaattcttacatttggcacc 1055
|||||||||||||||||||||||||||||||||||||
Sbjct: 541 tcactgtatgggaaacagaattcttacatttggcacc 577
>gnl|LJGI|BP052275
Length = 444
Score = 767 bits (387), Expect = 0.0
Identities = 438/447 (97%), Gaps = 6/447 (1%)
Strand = Plus / Plus
Query: 1025 tatgggaaacagaattcttacatttggcaccatctgccaatcttgtagtttacaagggaa 1084
||||||||||||||| |||||||| |||||||||||||||||| |||||||| |||||||
Sbjct: 1 tatgggaaacagaat-cttacatt-ggcaccatctgccaatct-gtagtttagaagggaa 57
Query: 1085 acaaagatgtacggagttgcatcagggcattagagttttataatgaagatggtgggatct 1144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 58 acaaagatgtacggagttgcatcagggcattagagttttataatgaagatggtgggatct 117
Query: 1145 tatttcaaatattattgtcatcttctgatattatcgttgaggacttacatgaactaagat 1204
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 tatttcaaatattattgtcatcttctgatattatcgttgaggacttacatgaactaagat 177
Query: 1205 gcatttcatgggaagcaat-aataattgatg-aatgccagcgatccaaaagtttaagtca 1262
||||||||||||||||||| |||||| |||| ||||||||||||||||||||||||||||
Sbjct: 178 gcatttcatgggaagcaatcaataatggatgcaatgccagcgatccaaaagtttaagtca 237
Query: 1263 tattgactatatcaggactctagcagctgagatgaggcttcttctcgttagcggacaaat 1322
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 tattgactatatcaggactctagcagctgagatgaggcttcttctcgttagcggacaaat 297
Query: 1323 caaggaagatcgggctgattatatcaaactgctttcattcctcaagtctggacatcatag 1382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 caaggaagatcgggctgattatatcaaactgctttcattcctcaagtctggacatcatag 357
Query: 1383 gttaaatattgctcaaatggagacttacttctctgctagtatttccaatttgaagagcca 1442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 gttaaatattgctcaaatggagacttacttctctgctagtatttccaatttgaagagcca 417
Query: 1443 attgaaacaat-atgttgcatataagt 1468
|| |||||||| |||||||||||||||
Sbjct: 418 atagaaacaatcatgttgcatataagt 444
>gnl|LJGI|TC70193
Length = 529
Score = 563 bits (284), Expect = e-159
Identities = 284/284 (100%)
Strand = Plus / Plus
Query: 4664 tcgaaaaggagcgtggaaagttagttgaaaagtacatgacgttgtttcaaaatctcgata 4723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcgaaaaggagcgtggaaagttagttgaaaagtacatgacgttgtttcaaaatctcgata 60
Query: 4724 ctgcagttgagctgaagaagagggaacttgagacacaatatgaattagttctcatgaata 4783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctgcagttgagctgaagaagagggaacttgagacacaatatgaattagttctcatgaata 120
Query: 4784 gggtattagctgaggtttggttccaaaagcttgataattcagcacaaagcttagaacaag 4843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gggtattagctgaggtttggttccaaaagcttgataattcagcacaaagcttagaacaag 180
Query: 4844 tggcaatgcctagcttttccagttcccatgtatcaaggagccatatctctcatattcctg 4903
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tggcaatgcctagcttttccagttcccatgtatcaaggagccatatctctcatattcctg 240
Query: 4904 ctcaaagatttgaacaatttactactgaacgtcctcccatataa 4947
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ctcaaagatttgaacaatttactactgaacgtcctcccatataa 284
>gnl|LJGI|BP033618
Length = 467
Score = 543 bits (274), Expect = e-153
Identities = 276/277 (99%)
Strand = Plus / Plus
Query: 1 atgaatgtggagacgctttttacagataatgatggaggggattctttttcttggcgctgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 atgaatgtggagacgctttttacagataatgatggaggggattctttttcttggcgctgc 244
Query: 61 aaggaatcgactgaagaatataaagataatgcacaagaggatactgatgtgaatgataaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 aaggaatcgactgaagaatataaagataatgcacaagaggatactgatgtgaatgataaa 304
Query: 121 catggtgacagcgaacctctatgctgcaaatgctcgcgtggtggaatgctcatgcgctgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 catggtgacagcgaacctctatgctgcaaatgctcgcgtggtggaatgctcatgcgctgc 364
Query: 181 tgtggaaaaagatgccaaaggagttaccatccctcttgtgtggaccctcctttcaattat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 tgtggaaaaagatgccaaaggagttaccatccctcttgtgtggaccctcctttcaattat 424
Query: 241 gttcctccagggttttggtattgtatccagtgtgttg 277
||||||||| |||||||||||||||||||||||||||
Sbjct: 425 gttcctccanggttttggtattgtatccagtgtgttg 461