Miyakogusa Predicted Gene
- Lj1g3v4590780.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4590780.1 Non Chatacterized Hit- tr|K1L256|K1L256_9BACT
Uncharacterized protein OS=Cecembia lonarensis LW9
PE=,32.22,2.1,seg,NULL,CUFF.32926.1
(466 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC81471 similar to UniRef100_Q75Z33 Cluster: NADH dehyd... 656 0.0
gnl|LJGI|TC60340 similar to UniRef100_P08154 Cluster: Early grow... 345 1e-94
gnl|LJGI|TC62918 88 6e-17
gnl|LJGI|TC60472 weakly similar to UniRef100_A7QG52 Cluster: Chr... 80 1e-14
gnl|LJGI|TC59019 similar to UniRef100_Q9XE55 Cluster: Scarecrow-... 66 2e-10
gnl|LJGI|FS331038 similar to UniRef100_A7NU83 Cluster: Chromosom... 52 3e-06
>gnl|LJGI|TC81471 similar to UniRef100_Q75Z33 Cluster: NADH dehydrogenase subunit 4L;
n=1; Euhadra congenita congenita|Rep: NADH dehydrogenase
subunit 4L - Euhadra congenita congenita, partial (17%)
Length = 548
Score = 656 bits (331), Expect = 0.0
Identities = 363/376 (96%)
Strand = Plus / Minus
Query: 91 tgtcatcttcaaatccttcagtttctagttctgtttctgaaccaagatctgttacaaacc 150
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 548 tgtcatcttcaaatccttcagtttctagttctgtttctgaaccaagatctgttacgaacc 489
Query: 151 cataaagatccaatctttatgagnnnnnnngacaagcaattacagaaaatggtggatcgg 210
|||| |||||||||||||||||| ||||||| ||||||||||||||||||||||
Sbjct: 488 catacagatccaatctttatgagtaaaaaagacaagccattacagaaaatggtggatcgg 429
Query: 211 agatgcatgtggaaatctgaatctttgccggtggtcacagcatcaggttcaccaccagcg 270
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 agatgcatgtggaaatctgaatctttgccggtggtcacagcatcaggttcaccaccagcg 369
Query: 271 tttcctgcgagtcgcaatccagcgacttgcgagtcaaatcggcgagtttgggagtcaaat 330
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 tttcctgcgagtcgcaatccagcgacttgcgagtcaaatcggcgagtttgggagtcaaat 309
Query: 331 ctggatctttgtcacagacatgttgtttgggaggttaatgggttgagggcgaagttgatg 390
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 308 ctggatctttgtcacagacatgttgtttgggaggttaatgggttgggggcgaagttgatg 249
Query: 391 aagcaaatgctcaccttaatcaattcaaacacggccattttggtaccgaagaatgattta 450
|| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 aatcaaatgctcaccttcatcaattcaaacacggccattttggtaccgaagaatgattta 189
Query: 451 tttttattactgtgat 466
||||||||||||||||
Sbjct: 188 tttttattactgtgat 173
>gnl|LJGI|TC60340 similar to UniRef100_P08154 Cluster: Early growth response protein
1; n=2; Rattus norvegicus|Rep: Early growth response
protein 1 - Rattus norvegicus (Rat), partial (5%)
Length = 771
Score = 345 bits (174), Expect = 1e-94
Identities = 313/362 (86%), Gaps = 22/362 (6%)
Strand = Plus / Plus
Query: 1 atggaggaggccgccaccaccatc---ttctcctctattttccggcgaaaccccaccaac 57
|||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||
Sbjct: 70 atggaggaggccgccaccaccatcatcttctcccctattttccgacgaaaccccaccaac 129
Query: 58 ctcctcctcctctgccaccgtcaactccgtcgttgtcatcttcaaatccttcagtttcta 117
||||||||||||||||| |||| ||| || || |||||||||||||||||||||||||||
Sbjct: 130 ctcctcctcctctgccatcgtcgacttcgccgctgtcatcttcaaatccttcagtttcta 189
Query: 118 gttctgtttctgaaccaagatctgttacaaacccataaagatccaatc-tttatgagnnn 176
||| ||||| ||||||||||||||||||||||||||| |||||||| | ||||||||
Sbjct: 190 gttttgtttatgaaccaagatctgttacaaacccatatagatccaaccttttatgag-aa 248
Query: 177 nnnngacaagcaattacagaaaatgg-----------------tggatcggagatgcatg 219
||||||||||||||||||| || |||||| |||| |||||
Sbjct: 249 aaaagacaagcaattacagaaaacggtggatctggatctgagatggatcagagacgcatg 308
Query: 220 tggaaatctgaatctttgccggtggtcacagcatcaggttcaccaccagcgtttcctgcg 279
|||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||| ||
Sbjct: 309 tggaaatctggatctttgtcggtggtcacagcatcaggttcaccaccaatgtttcctccg 368
Query: 280 agtcgcaatccagcgacttgcgagtcaaatcggcgagtttgggagtcaaatctggatctt 339
|||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 agtcgcaacccagcgactcgcgagtcaaatcggcgagtttgggagtcaaatctggatctt 428
Query: 340 tg 341
||
Sbjct: 429 tg 430
>gnl|LJGI|TC62918
Length = 816
Score = 87.7 bits (44), Expect = 6e-17
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 330 tctggatctttgtcacagacatgttgtttgggaggttaatgggttgagggcgaagttgat 389
||||||||||||||||| ||||||||||||| |||||||||||||| ||||||| ||||
Sbjct: 387 tctggatctttgtcacaaacatgttgtttggaaggttaatgggttgtaggcgaagatgat 446
Query: 390 gaagcaaa 397
|| |||||
Sbjct: 447 gacgcaaa 454
>gnl|LJGI|TC60472 weakly similar to UniRef100_A7QG52 Cluster: Chromosome undetermined
scaffold_91, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_91, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (21%)
Length = 1313
Score = 79.8 bits (40), Expect = 1e-14
Identities = 46/48 (95%)
Strand = Plus / Minus
Query: 359 gggaggttaatgggttgagggcgaagttgatgaagcaaatgctcacct 406
||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct: 661 gggaggttaatgggttgagggcgaagttgatgaagcaaaggcacacct 614
>gnl|LJGI|TC59019 similar to UniRef100_Q9XE55 Cluster: Scarecrow-like 8; n=2;
Arabidopsis thaliana|Rep: Scarecrow-like 8 - Arabidopsis
thaliana (Mouse-ear cress), partial (32%)
Length = 909
Score = 65.9 bits (33), Expect = 2e-10
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 255 aggttcaccaccagcgtttcctgcgagtcgcaatccagcgacttgcgagtcaaatcggcg 314
||||||||||||||||| |||| |||||||||| | || |||| ||||||||||| |||
Sbjct: 126 aggttcaccaccagcgtctcctccgagtcgcaaccgagtgactcccgagtcaaatcagcg 67
Query: 315 agttt 319
|||||
Sbjct: 66 agttt 62
>gnl|LJGI|FS331038 similar to UniRef100_A7NU83 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 560
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 57 cctcctcctcctctgccaccgtcaactccg 86
||||||||||||| ||||||||||||||||
Sbjct: 152 cctcctcctcctccgccaccgtcaactccg 181