Miyakogusa Predicted Gene

Lj1g3v4590740.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v4590740.1 Non Chatacterized Hit- tr|I3T7J1|I3T7J1_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,55.1,0.00005,
,gene.g36910.t1.1
         (231 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC76825 similar to UniRef100_A7PER1 Cluster: Chromosome...    80   7e-15
gnl|LJGI|BP045373 similar to UniRef100_A7PYL0 Cluster: Chromosom...    50   6e-06
gnl|LJGI|TC73955 similar to UniRef100_A7PYL0 Cluster: Chromosome...    50   6e-06

>gnl|LJGI|TC76825 similar to UniRef100_A7PER1 Cluster: Chromosome chr11 scaffold_13,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr11 scaffold_13, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (90%)
          Length = 728

 Score = 79.8 bits (40), Expect = 7e-15
 Identities = 58/64 (90%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgttctacatggagacgtctgctaagactgtagagaacatcaatgaccttttctttgaa 60
           ||||| |||||||| || ||||||||||||| ||||||||||||||| ||||||| ||||
Sbjct: 431 atgttttacatggaaacatctgctaagactgcagagaacatcaatgagcttttctatgaa 490

               
Query: 61  atag 64
           ||||
Sbjct: 491 atag 494


>gnl|LJGI|BP045373 similar to UniRef100_A7PYL0 Cluster: Chromosome chr12 scaffold_38,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr12 scaffold_38, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (18%)
          Length = 523

 Score = 50.1 bits (25), Expect = 6e-06
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                    
Query: 173 aggagtgggcctctgctggcctctccagcatgccaccggtgtcctgttcggtagtct 229
           |||||||||||||||| ||| || |||||||||||| || | ||||  |||||||||
Sbjct: 228 aggagtgggcctctgccggcttccccagcatgccactggcgccctgcccggtagtct 172


>gnl|LJGI|TC73955 similar to UniRef100_A7PYL0 Cluster: Chromosome chr12 scaffold_38,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr12 scaffold_38, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (13%)
          Length = 584

 Score = 50.1 bits (25), Expect = 6e-06
 Identities = 49/57 (85%)
 Strand = Plus / Plus

                                                                    
Query: 173 aggagtgggcctctgctggcctctccagcatgccaccggtgtcctgttcggtagtct 229
           |||||||||||||||| ||| || |||||||||||| || | ||||  |||||||||
Sbjct: 288 aggagtgggcctctgccggcttccccagcatgccactggcgccctgcccggtagtct 344