Miyakogusa Predicted Gene
- Lj1g3v4579590.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4579590.1 Non Chatacterized Hit- tr|I1L8W1|I1L8W1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.52037
PE,70.91,0,DNA-binding pseudobarrel domain,DNA-binding pseudobarrel
domain; no description,DNA-binding pseudoba,CUFF.32761.1
(2145 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|CB827147 weakly similar to UniRef100_A7NZK3 Cluster: Ch... 704 0.0
gnl|LJGI|AV779573 similar to UniRef100_UPI00006DD4D5 Cluster: CO... 170 2e-41
gnl|LJGI|CN825794 similar to UniRef100_A7PT37 Cluster: Chromosom... 88 3e-16
gnl|LJGI|TC64983 similar to UniRef100_A7PT37 Cluster: Chromosome... 78 3e-13
>gnl|LJGI|CB827147 weakly similar to UniRef100_A7NZK3 Cluster: Chromosome chr6
scaffold_3, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr6 scaffold_3, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (14%)
Length = 441
Score = 704 bits (355), Expect = 0.0
Identities = 362/363 (99%), Gaps = 1/363 (0%)
Strand = Plus / Plus
Query: 1713 gattctcacagagcaacaaatctctctgagttcatccgctgacaacacagtttccccggt 1772
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1 gattctcacagagcaacaaatctctctgagtt-atccgctgacaacacagtttccccggt 59
Query: 1773 tcttactggaaacaacagttcatcggatggaaatgcagataaaaagactaatttttctaa 1832
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 tcttactggaaacaacagttcatcggatggaaatgcagataaaaagactaatttttctaa 119
Query: 1833 tggttttggatctgctcttgatcggcaagatagtttgcctagtttggagacaggtcactg 1892
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 tggttttggatctgctcttgatcggcaagatagtttgcctagtttggagacaggtcactg 179
Query: 1893 taaagtttttatggaatcagaagatgtaggaaggaccatgaacctcacattactcaattc 1952
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 taaagtttttatggaatcagaagatgtaggaaggaccatgaacctcacattactcaattc 239
Query: 1953 ttatgatgaactgtacaaaaaactagctgatatgtttgggatacaaaaatctggggtgtt 2012
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 ttatgatgaactgtacaaaaaactagctgatatgtttgggatacaaaaatctggggtgtt 299
Query: 2013 gagtcatgtgctctactgtgataaaacaggagcagttaaacacattggagatgaagcatt 2072
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 gagtcatgtgctctactgtgataaaacaggagcagttaaacacattggagatgaagcatt 359
Query: 2073 cag 2075
|||
Sbjct: 360 cag 362
>gnl|LJGI|AV779573 similar to UniRef100_UPI00006DD4D5 Cluster: COG0814: Amino acid
permeases; n=1; Yersinia pestis biovar Orientalis str.
IP275|Rep: COG0814: Amino acid permeases - Yersinia
pestis biovar Orientalis str. IP275, partial (5%)
Length = 545
Score = 170 bits (86), Expect = 2e-41
Identities = 89/90 (98%)
Strand = Plus / Plus
Query: 30 gttgctatatttagctataattgagatgatggtgagtacagagtcaaaggagaaattgaa 89
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 gttgctatatttagctataattgagatgatggtgagtacagagtcaaaggagaaattgaa 515
Query: 90 agaggtggtggagaggtgtttagatcctca 119
||||||||||||||||||| ||||||||||
Sbjct: 516 agaggtggtggagaggtgtatagatcctca 545
>gnl|LJGI|CN825794 similar to UniRef100_A7PT37 Cluster: Chromosome chr8 scaffold_29,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_29, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 212
Score = 87.7 bits (44), Expect = 3e-16
Identities = 107/128 (83%)
Strand = Plus / Plus
Query: 958 tttgaggtggtttactatcctcgggcaagtactccggagttttgtgttaaggcctctttg 1017
|||||||| | |||||| ||| ||| ||| ||||| |||||||||| ||| ||||||||
Sbjct: 80 tttgaggttgcttactaccctaggggaagcactccagagttttgtgcgaagacctctttg 139
Query: 1018 gttagagcagcaatgcaggttaggtggtgtcctggaatgaggttcaagatgccctttgaa 1077
||| | ||||||||||| ||| | || || |||| ||||||||||||||| |||| |||
Sbjct: 140 gttgaatcagcaatgcagattacgcggcgttctgggatgaggttcaagatggccttcgaa 199
Query: 1078 accgagga 1085
||||||||
Sbjct: 200 accgagga 207
>gnl|LJGI|TC64983 similar to UniRef100_A7PT37 Cluster: Chromosome chr8 scaffold_29,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_29, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 715
Score = 77.8 bits (39), Expect = 3e-13
Identities = 90/107 (84%)
Strand = Plus / Plus
Query: 103 aggtgtttagatcctcagctatggcatgcttgtgctggagggatggtgcaaatgccacag 162
|||||||||||| |||||||||||||||| |||||||| | | ||| ||||||||||
Sbjct: 302 aggtgtttagattctcagctatggcatgcctgtgctggtgccacggttcaaatgccacct 361
Query: 163 gtgaatgctaaggtcttctacttccctcagggtcacgcagaacatgc 209
| || | || |||||||||||||||||||| |||||||| |||||
Sbjct: 362 ctcaacaccaaagtcttctacttccctcagggacacgcagagcatgc 408
Score = 71.9 bits (36), Expect = 2e-11
Identities = 72/84 (85%)
Strand = Plus / Plus
Query: 414 ttcttttgcaaaaacattgacacaatctgatgccaacaatggcggtggtttttctgttcc 473
||||||||| || || ||||| ||||||||||| |||||||| || || |||||||||||
Sbjct: 625 ttcttttgccaagactttgactcaatctgatgctaacaatggtggaggcttttctgttcc 684
Query: 474 taggtattgtgcagagacaatttt 497
| | |||||||| ||||| |||||
Sbjct: 685 tcgttattgtgctgagaccatttt 708