Miyakogusa Predicted Gene
- Lj1g3v4579390.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4579390.1 tr|D8TW33|D8TW33_VOLCA Qc-SNARE, SYP7-family
OS=Volvox carteri GN=syp71 PE=4
SV=1,46.88,0.0000000000008,T_SNARE,Target SNARE coiled-coil domain; no
description,NULL; seg,NULL; HYPOTHETICAL PROTEIN,NULL; S,CUFF.32738.1
(801 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|DC596145 similar to UniRef100_A7PT16 Cluster: Chromosom... 997 0.0
gnl|LJGI|TC61064 similar to UniRef100_A7PT16 Cluster: Chromosome... 743 0.0
gnl|LJGI|TC68657 similar to UniRef100_A7PT16 Cluster: Chromosome... 379 e-104
gnl|LJGI|GO025368 similar to UniRef100_A7PT16 Cluster: Chromosom... 252 3e-66
gnl|LJGI|AV770244 similar to UniRef100_A7PT16 Cluster: Chromosom... 252 3e-66
gnl|LJGI|GO025941 similar to UniRef100_A7PT16 Cluster: Chromosom... 190 9e-48
>gnl|LJGI|DC596145 similar to UniRef100_A7PT16 Cluster: Chromosome chr8 scaffold_29,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_29, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (64%)
Length = 553
Score = 997 bits (503), Expect = 0.0
Identities = 506/507 (99%)
Strand = Plus / Plus
Query: 1 atgagcgtcatcgacattctcaccagagttgattccattgttaacaagtacgacaaatac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47 atgagcgtcatcgacattctcaccagagttgattccattgttaacaagtacgacaaatac 106
Query: 61 gacatcgataagcaaaaagattccaatgtctccggcgacgatcccttcgccaaactctac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107 gacatcgataagcaaaaagattccaatgtctccggcgacgatcccttcgccaaactctac 166
Query: 121 gccgccgtcgacgccgacattgacgccgcacttcagaaagcagaaaccgcttccaatggg 180
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 ggcgccgtcgacgccgacattgacgccgcacttcagaaagcagaaaccgcttccaatggg 226
Query: 181 aaaaatagggcatcaactgtagcgatcaatgctgagattcgtcgcactaaggctaggttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 aaaaatagggcatcaactgtagcgatcaatgctgagattcgtcgcactaaggctaggttg 286
Query: 241 ctggatgaggtgcccaaattgcagaggttggctgtaaaaaaggtaaaagggctttcgtca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 ctggatgaggtgcccaaattgcagaggttggctgtaaaaaaggtaaaagggctttcgtca 346
Query: 301 caagaatttgctgcccgtaatgatttagttcttgcattgccggagaggatccaagcgatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 caagaatttgctgcccgtaatgatttagttcttgcattgccggagaggatccaagcgatt 406
Query: 361 ccagatgggacccctgctgcacccaaacaagctggaggctgggcagcttcaggctcacgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 ccagatgggacccctgctgcacccaaacaagctggaggctgggcagcttcaggctcacgc 466
Query: 421 cctgaaattaaatttgattcgaatgggcgatttgatgatgaatacttccaacaaacagaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 cctgaaattaaatttgattcgaatgggcgatttgatgatgaatacttccaacaaacagaa 526
Query: 481 gaatcaagtcaattcaggcaggagtat 507
|||||||||||||||||||||||||||
Sbjct: 527 gaatcaagtcaattcaggcaggagtat 553
>gnl|LJGI|TC61064 similar to UniRef100_A7PT16 Cluster: Chromosome chr8 scaffold_29,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_29, whole genome shotgun
sequence - Vitis vinifera (Grape), complete
Length = 1244
Score = 743 bits (375), Expect = 0.0
Identities = 695/799 (86%), Gaps = 2/799 (0%)
Strand = Plus / Plus
Query: 1 atgagcgtcatcgacattctcaccagagttgattccattgttaacaagtacgacaaatac 60
||||||||||||||| |||| ||||||||||| ||||| ||||||||||||||||||
Sbjct: 159 atgagcgtcatcgaccttctaaccagagttgacaccatttgcaacaagtacgacaaatac 218
Query: 61 gacatcgataagcaaaaagattccaatgtctccggcgacgatcccttcgccaaactctac 120
||| |||| || || ||||| |||||||||||||| | || |||| |||||||
Sbjct: 219 gacgtcgaacgccaccgtgaatccaacctctccggcgacgatgcatttgccagactctac 278
Query: 121 gccgccgtcgacgccgacattgacgc-cgcacttcagaaagcagaaaccgcttccaatgg 179
||| |||||||||||||||| || || | || | |||||||| ||||| ||||| || |
Sbjct: 279 gccaccgtcgacgccgacatcgaggcactcaat-cagaaagctgaaactgcttctaagga 337
Query: 180 gaaaaatagggcatcaactgtagcgatcaatgctgagattcgtcgcactaaggctaggtt 239
|||| || ||| || |||||||||||||||| ||||||||||| || |||||||||||
Sbjct: 338 gaaaggtaaggcttctgctgtagcgatcaatgcggagattcgtcgaaccaaggctaggtt 397
Query: 240 gctggatgaggtgcccaaattgcagaggttggctgtaaaaaaggtaaaagggctttcgtc 299
||| || || || ||||| ||||||| |||||||| ||||||||||| |||||||| ||
Sbjct: 398 gcttgaagaagttcccaagttgcagaaattggctgtcaaaaaggtaaaggggctttcatc 457
Query: 300 acaagaatttgctgcccgtaatgatttagttcttgcattgccggagaggatccaagcgat 359
|||||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||
Sbjct: 458 gcaagaatttgctgcccgtaatgatttggttcttgcattgccggagagaatccaagctat 517
Query: 360 tccagatgggacccctgctgcacccaaacaagctggaggctgggcagcttcaggctcacg 419
||||||||||| |||||||| || |||||| |||||||||||||| |||| ||||||||
Sbjct: 518 cccagatgggactcctgctgcgccaaaacaaactggaggctgggcatcttcgggctcacg 577
Query: 420 ccctgaaattaaatttgattcgaatgggcgatttgatgatgaatacttccaacaaacaga 479
|| || ||||| |||||||| |||||||||||||||| ||||||||||||||||| ||
Sbjct: 578 tccggatattaagtttgattctgatgggcgatttgatgacgaatacttccaacaaactga 637
Query: 480 agaatcaagtcaattcaggcaggagtatgaaatgcgtaaaatgaaacaggatcaaggttt 539
|||||||||| ||||||| | || ||||||||||||| ||| |||||||||||||||||
Sbjct: 638 ggaatcaagtcgattcaggaacgaatatgaaatgcgtagaataaaacaggatcaaggttt 697
Query: 540 ggacgtgatcgcagaaggattagatacattgaaaaacatggcccatgatatgaatgagga 599
||| ||||| |||||||| || |||||||||||| ||||||| |||||||||||||||||
Sbjct: 698 ggatgtgattgcagaagggttggatacattgaaagacatggcacatgatatgaatgagga 757
Query: 600 atttgatagacaagttccactgatggatgagattgatactaaggtggacaaggcatcatc 659
| | |||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||
Sbjct: 758 actggatagacaagttccactgatggatgagattgacactaaggtggaccaggcagcatc 817
Query: 660 tgaccttaagaataccaatgttagacttaaacatacagtgacccagcttcgatccagtcg 719
||||||||||||||||||||||||||||||| | ||||| | ||||||||| ||||||||
Sbjct: 818 tgaccttaagaataccaatgttagacttaaagacacagttatccagcttcggtccagtcg 877
Query: 720 aaacttctgtatcgatattgttttgttgattatcattttgggaattgctgcctatttgta 779
||| ||||| ||||||||||||||||||||||| ||| |||||||||||||||| || ||
Sbjct: 878 aaatttctgcatcgatattgttttgttgattataattctgggaattgctgcctacttata 937
Query: 780 caatgtgttgaagaaatga 798
|||||| || |||||||||
Sbjct: 938 caatgtattaaagaaatga 956
>gnl|LJGI|TC68657 similar to UniRef100_A7PT16 Cluster: Chromosome chr8 scaffold_29,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_29, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (43%)
Length = 540
Score = 379 bits (191), Expect = e-104
Identities = 191/191 (100%)
Strand = Plus / Plus
Query: 155 agaaagcagaaaccgcttccaatgggaaaaatagggcatcaactgtagcgatcaatgctg 214
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 agaaagcagaaaccgcttccaatgggaaaaatagggcatcaactgtagcgatcaatgctg 409
Query: 215 agattcgtcgcactaaggctaggttgctggatgaggtgcccaaattgcagaggttggctg 274
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 agattcgtcgcactaaggctaggttgctggatgaggtgcccaaattgcagaggttggctg 469
Query: 275 taaaaaaggtaaaagggctttcgtcacaagaatttgctgcccgtaatgatttagttcttg 334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 taaaaaaggtaaaagggctttcgtcacaagaatttgctgcccgtaatgatttagttcttg 529
Query: 335 cattgccggag 345
|||||||||||
Sbjct: 530 cattgccggag 540
Score = 309 bits (156), Expect = 1e-83
Identities = 156/156 (100%)
Strand = Plus / Plus
Query: 1 atgagcgtcatcgacattctcaccagagttgattccattgttaacaagtacgacaaatac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 atgagcgtcatcgacattctcaccagagttgattccattgttaacaagtacgacaaatac 177
Query: 61 gacatcgataagcaaaaagattccaatgtctccggcgacgatcccttcgccaaactctac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 gacatcgataagcaaaaagattccaatgtctccggcgacgatcccttcgccaaactctac 237
Query: 121 gccgccgtcgacgccgacattgacgccgcacttcag 156
||||||||||||||||||||||||||||||||||||
Sbjct: 238 gccgccgtcgacgccgacattgacgccgcacttcag 273
>gnl|LJGI|GO025368 similar to UniRef100_A7PT16 Cluster: Chromosome chr8 scaffold_29,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_29, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (43%)
Length = 664
Score = 252 bits (127), Expect = 3e-66
Identities = 178/195 (91%)
Strand = Plus / Plus
Query: 604 gatagacaagttccactgatggatgagattgatactaaggtggacaaggcatcatctgac 663
|||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||
Sbjct: 325 gatagacaagttccactgatggatgagattgacactaaggtggaccaggcagcatctgac 384
Query: 664 cttaagaataccaatgttagacttaaacatacagtgacccagcttcgatccagtcgaaac 723
||||||||||||||||||||||||||| | ||||| | ||||||||| |||||||||||
Sbjct: 385 cttaagaataccaatgttagacttaaagacacagttatccagcttcggtccagtcgaaat 444
Query: 724 ttctgtatcgatattgttttgttgattatcattttgggaattgctgcctatttgtacaat 783
||||| ||||||||||||||||||||||| ||| |||||||| ||||||| || ||||||
Sbjct: 445 ttctgcatcgatattgttttgttgattataattctgggaattactgcctacttatacaat 504
Query: 784 gtgttgaagaaatga 798
|| || |||||||||
Sbjct: 505 gtattaaagaaatga 519
Score = 87.7 bits (44), Expect = 1e-16
Identities = 116/140 (82%)
Strand = Plus / Plus
Query: 1 atgagcgtcatcgacattctcaccagagttgattccattgttaacaagtacgacaaatac 60
||||||||||||||| |||| ||||||||||| ||||| ||||||||||||||||||
Sbjct: 160 atgagcgtcatcgaccttctaaccagagttgacaccatttgcaacaagtacgacaaatac 219
Query: 61 gacatcgataagcaaaaagattccaatgtctccggcgacgatcccttcgccaaactctac 120
||| |||| || || ||||| |||||||||||||| | || |||| |||||||
Sbjct: 220 gacgtcgaacgccaccgtgaatccaacctctccggcgacgatgcatttgccagactctac 279
Query: 121 gccgccgtcgacgccgacat 140
||| ||||||||||||||||
Sbjct: 280 gccaccgtcgacgccgacat 299
>gnl|LJGI|AV770244 similar to UniRef100_A7PT16 Cluster: Chromosome chr8 scaffold_29,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_29, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (20%)
Length = 380
Score = 252 bits (127), Expect = 3e-66
Identities = 157/167 (94%)
Strand = Plus / Minus
Query: 633 tgatactaaggtggacaaggcatcatctgaccttaagaataccaatgttagacttaaaca 692
|||||||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 380 tgatactaaggtggaccaggcatcatctgaccttaagcatacccatgttagacttaaaca 321
Query: 693 tacagtgacccagcttcgatccagtcgaaacttctgtatcgatattgttttgttgattat 752
||||||||||| |||||||||| |||| || |||||||||||||||| ||||||||||||
Sbjct: 320 tacagtgaccccgcttcgatcccgtcgcaagttctgtatcgatattggtttgttgattat 261
Query: 753 cattttgggaattgctgcctatttgtacaatgtgttgaagaaatgat 799
|||||||||||||||||||||||||||| |||| |||||||||||||
Sbjct: 260 cattttgggaattgctgcctatttgtaccatgtcttgaagaaatgat 214
>gnl|LJGI|GO025941 similar to UniRef100_A7PT16 Cluster: Chromosome chr8 scaffold_29,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_29, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (50%)
Length = 554
Score = 190 bits (96), Expect = 9e-48
Identities = 150/168 (89%)
Strand = Plus / Plus
Query: 301 caagaatttgctgcccgtaatgatttagttcttgcattgccggagaggatccaagcgatt 360
|||||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||
Sbjct: 387 caagaatttgctgcccgtaatgatttggttcttgcattgccggagagaatccaagctatc 446
Query: 361 ccagatgggacccctgctgcacccaaacaagctggaggctgggcagcttcaggctcacgc 420
||||||||||| |||||||| || |||||| |||||||||||| | |||| ||||||||
Sbjct: 447 ccagatgggactcctgctgcgccaaaacaaactggaggctgggtatcttcgggctcacgt 506
Query: 421 cctgaaattaaatttgattcgaatgggcgatttgatgatgaatacttc 468
|| || ||||| |||||||| |||||||||||||||| |||||||||
Sbjct: 507 ccggatattaagtttgattctgatgggcgatttgatgacgaatacttc 554
Score = 97.6 bits (49), Expect = 1e-19
Identities = 183/225 (81%), Gaps = 2/225 (0%)
Strand = Plus / Plus
Query: 1 atgagcgtcatcgacattctcaccagagttgattccattgttaacaagtacgacaaatac 60
||||||||||||||| |||| ||||||||||| ||||| ||||||||||||||||||
Sbjct: 160 atgagcgtcatcgaccttctaaccagagttgacaccatttgcaacaagtacgacaaatac 219
Query: 61 gacatcgataagcaaaaagattccaatgtctccggcgacgatcccttcgccaaactctac 120
||| |||| || || ||||| |||||||||||||| | || |||| |||||||
Sbjct: 220 gacgtcgaacgccaccgtgaatccaacctctccggcgacgatgcatttgccagactctac 279
Query: 121 gccgccgtcgacgccgacattgacgc-cgcacttcagaaagcagaaaccgcttccaatgg 179
||| |||||||||||||||| || || | || ||||||||| ||||| ||||| || |
Sbjct: 280 gccaccgtcgacgccgacatcgaggcactca-atcagaaagctgaaactgcttctaagga 338
Query: 180 gaaaaatagggcatcaactgtagcgatcaatgctgagattcgtcg 224
|||| || ||| || |||||||||||||||| |||||||||||
Sbjct: 339 gaaaggtaaggcttctgctgtagcgatcaatgcggagattcgtcg 383