Miyakogusa Predicted Gene
- Lj1g3v4579150.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4579150.1 Non Chatacterized Hit- tr|I1JPJ8|I1JPJ8_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,76.19,0,PPR,Pentatricopeptide repeat; no
description,Tetratricopeptide-like helical; PPR: pentatricopeptide
,gene.g36871.t1.1
(1830 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC82284 100 6e-20
gnl|LJGI|TC70829 similar to UniRef100_A7PSZ8 Cluster: Chromosome... 100 6e-20
>gnl|LJGI|TC82284
Length = 520
Score = 99.6 bits (50), Expect = 6e-20
Identities = 176/217 (81%), Gaps = 12/217 (5%)
Strand = Plus / Plus
Query: 439 ttcagagatatgctaagacagggtgtttatcagccaaatgagtttgtacttggcagtgtt 498
||||||||||||| ||| || ||||||| |||||||||||||||| || |||||||||||
Sbjct: 206 ttcagagatatgccaaggcatggtgtttgtcagccaaatgagtttatatttggcagtgtt 265
Query: 499 t---------tcagtgcttgcagcagtcttctggagccagaatatggaaggcaaattcat 549
| ||||||| ||| |||| ||||| || ||||||||| ||||||| || |||
Sbjct: 266 ttcagcagactcagtgcatgctgcagccttctcgaaccagaatat-gaaggcatatacat 324
Query: 550 ggaatatgtgctaaatttggtttagtgaggaacgttttttctggatgctccctctgtgac 609
|||||||||||| ||||| ||||| |||||||| ||| | | || || |||||| ||
Sbjct: 325 ggaatatgtgctcaatttcatttagggaggaacgctttcgccgaatact--ctctgttac 382
Query: 610 atgtatgccaaatgtggattcctaccttcagcgaaga 646
|||||| |||| |||||||||||||||||| ||||
Sbjct: 383 atgtatatgaaatttggattcctaccttcagccaaga 419
>gnl|LJGI|TC70829 similar to UniRef100_A7PSZ8 Cluster: Chromosome chr8 scaffold_29,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_29, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (5%)
Length = 514
Score = 99.6 bits (50), Expect = 6e-20
Identities = 176/217 (81%), Gaps = 12/217 (5%)
Strand = Plus / Plus
Query: 439 ttcagagatatgctaagacagggtgtttatcagccaaatgagtttgtacttggcagtgtt 498
||||||||||||| ||| || ||||||| |||||||||||||||| || |||||||||||
Sbjct: 214 ttcagagatatgccaaggcatggtgtttgtcagccaaatgagtttatatttggcagtgtt 273
Query: 499 t---------tcagtgcttgcagcagtcttctggagccagaatatggaaggcaaattcat 549
| ||||||| ||| |||| ||||| || ||||||||| ||||||| || |||
Sbjct: 274 ttcagcagactcagtgcatgctgcagccttctcgaaccagaatat-gaaggcatatacat 332
Query: 550 ggaatatgtgctaaatttggtttagtgaggaacgttttttctggatgctccctctgtgac 609
|||||||||||| ||||| ||||| |||||||| ||| | | || || |||||| ||
Sbjct: 333 ggaatatgtgctcaatttcatttagggaggaacgctttcgccgaatact--ctctgttac 390
Query: 610 atgtatgccaaatgtggattcctaccttcagcgaaga 646
|||||| |||| |||||||||||||||||| ||||
Sbjct: 391 atgtatatgaaatttggattcctaccttcagcaaaga 427