Miyakogusa Predicted Gene
- Lj1g3v4579030.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4579030.1 Non Chatacterized Hit- tr|I1NA56|I1NA56_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.40634
PE,92.37,0,seg,NULL; CCAATSUBUNTA,Transcription factor, CBFA/NFYB, DNA
topoisomerase; no description,Histone-fo,CUFF.32709.1
(642 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC69613 homologue to UniRef100_A7NZC8 Cluster: Chromoso... 779 0.0
gnl|LJGI|TC60173 similar to UniRef100_Q1W9Y2 Cluster: Transcript... 178 3e-44
gnl|LJGI|TC61670 homologue to UniRef100_A7Q978 Cluster: Chromoso... 100 2e-20
gnl|LJGI|TC76034 homologue to UniRef100_A7Q978 Cluster: Chromoso... 84 1e-15
gnl|LJGI|TC58476 similar to UniRef100_Q67XJ2 Cluster: Nuclear tr... 66 3e-10
>gnl|LJGI|TC69613 homologue to UniRef100_A7NZC8 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (84%)
Length = 985
Score = 779 bits (393), Expect = 0.0
Identities = 393/393 (100%)
Strand = Plus / Plus
Query: 148 gcgccaaatacaaattcacagattagggttccgtccaccaccatgtccgacggtccaacc 207
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83 gcgccaaatacaaattcacagattagggttccgtccaccaccatgtccgacggtccaacc 142
Query: 208 agtccaggcgccggcggcagccacgacagcggcggcgaccacagccctcgctccaacatc 267
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 agtccaggcgccggcggcagccacgacagcggcggcgaccacagccctcgctccaacatc 202
Query: 268 cgcgaacaagacaggtaccttccaatcgccaacatcagccgcatcatgaagaaagctctc 327
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 cgcgaacaagacaggtaccttccaatcgccaacatcagccgcatcatgaagaaagctctc 262
Query: 328 cccgccaatggcaaaatcgccaaagacgcaaaggagactgttcaagagtgcgtctccgaa 387
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 cccgccaatggcaaaatcgccaaagacgcaaaggagactgttcaagagtgcgtctccgaa 322
Query: 388 ttcatcagcttcatcaccagcgaggcctctgataagtgtcagcgagagaagaggaagacg 447
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ttcatcagcttcatcaccagcgaggcctctgataagtgtcagcgagagaagaggaagacg 382
Query: 448 attaacggtgacgatttgctctgggcgatggcgacgctcggtttcgaggattatattgat 507
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 attaacggtgacgatttgctctgggcgatggcgacgctcggtttcgaggattatattgat 442
Query: 508 ccccttaagatttacctcaccagatacagagag 540
|||||||||||||||||||||||||||||||||
Sbjct: 443 ccccttaagatttacctcaccagatacagagag 475
>gnl|LJGI|TC60173 similar to UniRef100_Q1W9Y2 Cluster: Transcription factory NF-YB;
n=1; Salvia miltiorrhiza|Rep: Transcription factory
NF-YB - Salvia miltiorrhiza (Chinese sage), partial
(56%)
Length = 813
Score = 178 bits (90), Expect = 3e-44
Identities = 237/286 (82%)
Strand = Plus / Plus
Query: 239 gcggcgaccacagccctcgctccaacatccgcgaacaagacaggtaccttccaatcgcca 298
|||||||||||||||| ||||||| | |||| || || || | | |||||| | || |
Sbjct: 179 gcggcgaccacagcccccgctccagcttccgtgagcaggatcgtttccttcctgttgcta 238
Query: 299 acatcagccgcatcatgaagaaagctctccccgccaatggcaaaatcgccaaagacgcaa 358
|||||||||||||||||||||| | || || || |||||||||||||| || ||||| |
Sbjct: 239 acatcagccgcatcatgaagaagggacttcctgctaatggcaaaatcgctaaggacgcca 298
Query: 359 aggagactgttcaagagtgcgtctccgaattcatcagcttcatcaccagcgaggcctctg 418
|||||||||| || ||||| ||||| || |||||||||||| ||||||||||||| ||
Sbjct: 299 aggagactgtccaggagtgtgtctctgagttcatcagcttcgtcaccagcgaggcgagtg 358
Query: 419 ataagtgtcagcgagagaagaggaagacgattaacggtgacgatttgctctgggcgatgg 478
|||| || ||| |||||||||||||||| || ||||| ||||||||||||||||| ||||
Sbjct: 359 ataaatgccagagagagaagaggaagactatcaacggcgacgatttgctctgggcaatgg 418
Query: 479 cgacgctcggtttcgaggattatattgatccccttaagatttacct 524
| || || ||||| || || || |||||||| || ||| |||||||
Sbjct: 419 ccactctgggttttgaagagtacattgatccactcaagctttacct 464
>gnl|LJGI|TC61670 homologue to UniRef100_A7Q978 Cluster: Chromosome chr19
scaffold_66, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr19 scaffold_66, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (66%)
Length = 1236
Score = 99.6 bits (50), Expect = 2e-20
Identities = 122/146 (83%)
Strand = Plus / Plus
Query: 352 gacgcaaaggagactgttcaagagtgcgtctccgaattcatcagcttcatcaccagcgag 411
||||| |||||||| || || |||||||| || || ||||| |||||||||||| |||||
Sbjct: 558 gacgcgaaggagacggtgcaggagtgcgtgtcggagttcataagcttcatcaccggcgag 617
Query: 412 gcctctgataagtgtcagcgagagaagaggaagacgattaacggtgacgatttgctctgg 471
||||| || ||||| ||||| |||||| |||||||||| ||||| || || |||| |||
Sbjct: 618 gcctccgacaagtgccagcgggagaagcggaagacgatcaacggcgatgacctgctgtgg 677
Query: 472 gcgatggcgacgctcggtttcgagga 497
|| ||| ||||||| || ||||||||
Sbjct: 678 gccatgacgacgcttgggttcgagga 703
>gnl|LJGI|TC76034 homologue to UniRef100_A7Q978 Cluster: Chromosome chr19
scaffold_66, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr19 scaffold_66, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (41%)
Length = 478
Score = 83.8 bits (42), Expect = 1e-15
Identities = 102/122 (83%)
Strand = Plus / Plus
Query: 352 gacgcaaaggagactgttcaagagtgcgtctccgaattcatcagcttcatcaccagcgag 411
||||| |||||||| || || |||||||| || || ||||| |||||||||||| ||||
Sbjct: 339 gacgcgaaggagacggtgcaggagtgcgtgtcggagttcataagcttcatcaccggcgaa 398
Query: 412 gcctctgataagtgtcagcgagagaagaggaagacgattaacggtgacgatttgctctgg 471
||||| || ||||| ||| | |||||| |||||||||| ||||| ||||| ||||| |||
Sbjct: 399 gcctccgacaagtgccagagggagaagcggaagacgatcaacggcgacgacttgctgtgg 458
Query: 472 gc 473
||
Sbjct: 459 gc 460
>gnl|LJGI|TC58476 similar to UniRef100_Q67XJ2 Cluster: Nuclear transcription factor Y
subunit B-10; n=1; Arabidopsis thaliana|Rep: Nuclear
transcription factor Y subunit B-10 - Arabidopsis
thaliana (Mouse-ear cress), partial (70%)
Length = 838
Score = 65.9 bits (33), Expect = 3e-10
Identities = 165/209 (78%)
Strand = Plus / Plus
Query: 271 gaacaagacaggtaccttccaatcgccaacatcagccgcatcatgaagaaagctctcccc 330
||||| ||| ||||||| ||||| ||||| |||||||| ||||||||||| | | | ||
Sbjct: 275 gaacaggaccggtacctgccaattgccaatatcagccggatcatgaagaagggtttgccg 334
Query: 331 gccaatggcaaaatcgccaaagacgcaaaggagactgttcaagagtgcgtctccgaattc 390
|| ||||| || || || || || || ||||| || | || || || || || ||||||
Sbjct: 335 gctaatgggaagattgctaaggatgctaaggataccatgcaggaatgtgtttctgaattc 394
Query: 391 atcagcttcatcaccagcgaggcctctgataagtgtcagcgagagaagaggaagacgatt 450
|||||||| || ||||||||||| ||| || || ||| ||||||||| ||||| |||
Sbjct: 395 atcagctttattaccagcgaggcgagtgagaaatgccagaaagagaagagaaagaccatt 454
Query: 451 aacggtgacgatttgctctgggcgatggc 479
|| || || |||||||| |||||||||||
Sbjct: 455 aatggagatgatttgctgtgggcgatggc 483