Miyakogusa Predicted Gene

Lj1g3v4578920.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v4578920.2 Non Chatacterized Hit- tr|C5Z4C1|C5Z4C1_SORBI
Putative uncharacterized protein Sb10g003720 OS=Sorghu,28.25,9e-19,no
description,Tetratricopeptide-like helical; SUBFAMILY NOT NAMED,NULL;
FAMILY NOT NAMED,NULL; PPR_,CUFF.32707.2
         (1068 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC78615 similar to UniRef100_A7PSS3 Cluster: Chromosome...   383   e-105

>gnl|LJGI|TC78615 similar to UniRef100_A7PSS3 Cluster: Chromosome chr8 scaffold_29,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr8 scaffold_29, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (17%)
          Length = 419

 Score =  383 bits (193), Expect = e-105
 Identities = 193/193 (100%)
 Strand = Plus / Plus

                                                                        
Query: 854  ccgccattaaggtttgtgttgaaagtaagaactttaagcaagcattaacattatacgaag 913
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4    ccgccattaaggtttgtgttgaaagtaagaactttaagcaagcattaacattatacgaag 63

                                                                        
Query: 914  aaatgaaaagctgtgaaatacatccaaattgggtgacatataacacacttctgaaggcac 973
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64   aaatgaaaagctgtgaaatacatccaaattgggtgacatataacacacttctgaaggcac 123

                                                                        
Query: 974  gcagtaaatatggctctgtacttgaggtgcaacaatgcttagctatatatcaggatatgc 1033
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124  gcagtaaatatggctctgtacttgaggtgcaacaatgcttagctatatatcaggatatgc 183

                         
Query: 1034 aaaaagcagggta 1046
            |||||||||||||
Sbjct: 184  aaaaagcagggta 196