Miyakogusa Predicted Gene
- Lj1g3v4578920.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4578920.1 Non Chatacterized Hit- tr|I1NA46|I1NA46_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.25349 PE,79.74,0,no
description,Tetratricopeptide-like helical; SUBFAMILY NOT NAMED,NULL;
FAMILY NOT NAMED,NULL; PPR_,CUFF.32707.1
(2316 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC78615 similar to UniRef100_A7PSS3 Cluster: Chromosome... 825 0.0
gnl|LJGI|AV406645 686 0.0
gnl|LJGI|TC78638 similar to UniRef100_A7PSS3 Cluster: Chromosome... 240 3e-62
>gnl|LJGI|TC78615 similar to UniRef100_A7PSS3 Cluster: Chromosome chr8 scaffold_29,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_29, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (17%)
Length = 419
Score = 825 bits (416), Expect = 0.0
Identities = 416/416 (100%)
Strand = Plus / Plus
Query: 1706 ccgccattaaggtttgtgttgaaagtaagaactttaagcaagcattaacattatacgaag 1765
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 ccgccattaaggtttgtgttgaaagtaagaactttaagcaagcattaacattatacgaag 63
Query: 1766 aaatgaaaagctgtgaaatacatccaaattgggtgacatataacacacttctgaaggcac 1825
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 aaatgaaaagctgtgaaatacatccaaattgggtgacatataacacacttctgaaggcac 123
Query: 1826 gcagtaaatatggctctgtacttgaggtgcaacaatgcttagctatatatcaggatatgc 1885
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 gcagtaaatatggctctgtacttgaggtgcaacaatgcttagctatatatcaggatatgc 183
Query: 1886 aaaaagcagggtacaaacccaatgactactatctggaagaactgattgaggagtggtgtg 1945
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 aaaaagcagggtacaaacccaatgactactatctggaagaactgattgaggagtggtgtg 243
Query: 1946 aaggagtgatacaagataacagagagtaccaagcagaattttcttccatcaagaaatctg 2005
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 aaggagtgatacaagataacagagagtaccaagcagaattttcttccatcaagaaatctg 303
Query: 2006 aattagagagacctcaaagtttacttcttgaaaaaattgcagcacaccttctaaaaaggg 2065
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 aattagagagacctcaaagtttacttcttgaaaaaattgcagcacaccttctaaaaaggg 363
Query: 2066 tagctgacatcttagcaattgatgttcaagggctcacaaaggttgaagctcgtctg 2121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 tagctgacatcttagcaattgatgttcaagggctcacaaaggttgaagctcgtctg 419
>gnl|LJGI|AV406645
Length = 401
Score = 686 bits (346), Expect = 0.0
Identities = 355/358 (99%)
Strand = Plus / Plus
Query: 57 aaactcacaaccatcatcatcatccactccaccacaacgccacaccatcaaaccccacaa 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44 aaactcacaaccatcatcatcatccactccaccacaacgccacaccatcaaaccccacaa 103
Query: 117 atcctctcttccaaagctcacacctttaccctctcctccttcctctccctcttccccatg 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104 atcctctcttccaaagctcacacctttaccctctcctccttcctctccctcttccccatg 163
Query: 177 gaacatttctcgcaccctcgattccccactcagccccaaccactacgctcgcgtcgcctc 236
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 164 gaacatttctcgcaccctcgattccccactcagccccaaccactacgctcgcgtcgtctg 223
Query: 237 caagcttgcccaagacatcgaaatggttctacaggaggacccagttgattctggggttaa 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 caagcttgcccaagacatcgaaatggttctacaggaggacccagttgattctggggttaa 283
Query: 297 cgttgagctccttgccaagttggtcgtactgggtatccgaggcaggaacgtttggactgt 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 cgttgagctccttgccaagttggtcgtactgggtatccgaggcaggaacgtttggactgt 343
Query: 357 cattgacactttgaagaaagttcagggccttgagatttcactgtctgcgcatcttaat 414
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 344 cattgacactttgaagaaagttcagggccttgagatttcactgactgcgcatcttaat 401
>gnl|LJGI|TC78638 similar to UniRef100_A7PSS3 Cluster: Chromosome chr8 scaffold_29,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_29, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (3%)
Length = 511
Score = 240 bits (121), Expect = 3e-62
Identities = 121/121 (100%)
Strand = Plus / Plus
Query: 2196 catcataggagctaccaaagctgacggaagtccagccaaagagttactagaagtgcaagg 2255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 catcataggagctaccaaagctgacggaagtccagccaaagagttactagaagtgcaagg 60
Query: 2256 gacgataataaaacttcttaggaatgaattggggcttgaggttcttccagccagaaccag 2315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gacgataataaaacttcttaggaatgaattggggcttgaggttcttccagccagaaccag 120
Query: 2316 a 2316
|
Sbjct: 121 a 121