Miyakogusa Predicted Gene
- Lj1g3v4578900.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4578900.1 tr|A9U207|A9U207_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_154541,33.15,2e-18,Thioredoxin-like,Thioredoxin-like
fold; no description,Thioredoxin-like fold;
AhpC-TSA_2,NULL,CUFF.32695.1
(774 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC69905 similar to UniRef100_A7PST3 Cluster: Chromosome... 1534 0.0
gnl|LJGI|BW599789 similar to UniRef100_A7PST3 Cluster: Chromosom... 500 e-141
gnl|LJGI|GO040764 similar to UniRef100_A7PST3 Cluster: Chromosom... 414 e-115
>gnl|LJGI|TC69905 similar to UniRef100_A7PST3 Cluster: Chromosome chr8 scaffold_29,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_29, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (70%)
Length = 1101
Score = 1534 bits (774), Expect = 0.0
Identities = 774/774 (100%)
Strand = Plus / Plus
Query: 1 atggcatgctctccttctacaacgctcttcttgtccaattcaccacttcaccttaacaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 atggcatgctctccttctacaacgctcttcttgtccaattcaccacttcaccttaacaaa 122
Query: 61 aatacaaaccagtttccactgcaagcatttcccaccttgtcactaaatcaaaaccttcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 aatacaaaccagtttccactgcaagcatttcccaccttgtcactaaatcaaaaccttcaa 182
Query: 121 ttatattccaagaatctactcaatctctcaacaaaccgccaccatgcaacgaccctgcct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 ttatattccaagaatctactcaatctctcaacaaaccgccaccatgcaacgaccctgcct 242
Query: 181 tctgcttctgcaggagttgagtctccagtgttgagtgaggacaccacaggttcattggat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 tctgcttctgcaggagttgagtctccagtgttgagtgaggacaccacaggttcattggat 302
Query: 241 tctgtgaaagtgtttgatttgaatggaaatgggattccaatttctgatttgtggaaagat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 tctgtgaaagtgtttgatttgaatggaaatgggattccaatttctgatttgtggaaagat 362
Query: 301 aggaaagctgttgtggcatttgctcgccactttgggtgcgtgctttgccgcaaaagggct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 aggaaagctgttgtggcatttgctcgccactttgggtgcgtgctttgccgcaaaagggct 422
Query: 361 gattatcttgcagccaagaaggatctaatggatgcatctggagtcgcacttgttctaatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 gattatcttgcagccaagaaggatctaatggatgcatctggagtcgcacttgttctaatt 482
Query: 421 ggacctgggagcgttgatcaggccaaagcctttgctgagcaaacaaaatttggaggagaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 ggacctgggagcgttgatcaggccaaagcctttgctgagcaaacaaaatttggaggagaa 542
Query: 481 atctatgcagacccaactcactcatcatatgaggccttaaattttgtttctggagtttta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 atctatgcagacccaactcactcatcatatgaggccttaaattttgtttctggagtttta 602
Query: 541 actacatttacccccaatgcaggtcttaagataatacaattatatatggaaggttatcga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 actacatttacccccaatgcaggtcttaagataatacaattatatatggaaggttatcga 662
Query: 601 caagattggaagctttcatttgaaaaggacaccgttagtagaggaggctggaaacaagga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 caagattggaagctttcatttgaaaaggacaccgttagtagaggaggctggaaacaagga 722
Query: 661 ggaattatagttgcaggtcctggcaaaaataacatctcatacttacacaaggacaaagaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 ggaattatagttgcaggtcctggcaaaaataacatctcatacttacacaaggacaaagaa 782
Query: 721 gcaggggatgatccagaaattgaagatatcttaaaagcatgttgctcgtgaagc 774
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 783 gcaggggatgatccagaaattgaagatatcttaaaagcatgttgctcgtgaagc 836
>gnl|LJGI|BW599789 similar to UniRef100_A7PST3 Cluster: Chromosome chr8 scaffold_29,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_29, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (27%)
Length = 451
Score = 500 bits (252), Expect = e-141
Identities = 262/264 (99%), Gaps = 1/264 (0%)
Strand = Plus / Plus
Query: 156 ccgccaccatgcaacgaccctgc-cttctgcttctgcaggagttgagtctccagtgttga 214
||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 188 ccgccaccatgcaacgaccctgcacttctgcttctgcaagagttgagtctccagtgttga 247
Query: 215 gtgaggacaccacaggttcattggattctgtgaaagtgtttgatttgaatggaaatggga 274
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 gtgaggacaccacaggttcattggattctgtgaaagtgtttgatttgaatggaaatggga 307
Query: 275 ttccaatttctgatttgtggaaagataggaaagctgttgtggcatttgctcgccactttg 334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 ttccaatttctgatttgtggaaagataggaaagctgttgtggcatttgctcgccactttg 367
Query: 335 ggtgcgtgctttgccgcaaaagggctgattatcttgcagccaagaaggatctaatggatg 394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggtgcgtgctttgccgcaaaagggctgattatcttgcagccaagaaggatctaatggatg 427
Query: 395 catctggagtcgcacttgttctaa 418
||||||||||||||||||||||||
Sbjct: 428 catctggagtcgcacttgttctaa 451
>gnl|LJGI|GO040764 similar to UniRef100_A7PST3 Cluster: Chromosome chr8 scaffold_29,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_29, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (26%)
Length = 352
Score = 414 bits (209), Expect = e-115
Identities = 212/213 (99%)
Strand = Plus / Minus
Query: 380 aggatctaatggatgcatctggagtcgcacttgttctaattggacctgggagcgttgatc 439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 aggatctaatggatgcatctggagtcgcacttgttctaattggacctgggagcgttgatc 237
Query: 440 aggccaaagcctttgctgagcaaacaaaatttggaggagaaatctatgcagacccaactc 499
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 aggccaaagcctttgctgagcaaacaaaatttggaggagaaatctatgcagacccaactc 177
Query: 500 actcatcatatgaggccttaaattttgtttctggagttttaactacatttacccccaatg 559
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176 actcatcatatgaggccttaaattttgtttctggagttttaactacatttacccccaatg 117
Query: 560 caggtcttaagataatacaattatatatggaag 592
|||||||||||||||||||||||||||| ||||
Sbjct: 116 caggtcttaagataatacaattatatattgaag 84
Score = 71.9 bits (36), Expect = 6e-12
Identities = 36/36 (100%)
Strand = Plus / Minus
Query: 739 attgaagatatcttaaaagcatgttgctcgtgaagc 774
||||||||||||||||||||||||||||||||||||
Sbjct: 90 attgaagatatcttaaaagcatgttgctcgtgaagc 55