Miyakogusa Predicted Gene
- Lj1g3v4578840.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4578840.1 Non Chatacterized Hit- tr|Q9ARD0|Q9ARD0_SOLLC
Putative uncharacterized protein OS=Solanum
lycopersic,51.35,0.000000000006,DNA binding domain,DNA-binding WRKY;
WRKY DNA-binding domain,DNA-binding WRKY; SUBFAMILY NOT
NAMED,N,CUFF.32689.1
(1374 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC63567 similar to UniRef100_A7PST7 Cluster: Chromosome... 440 e-122
gnl|LJGI|GO023813 similar to UniRef100_A7LHF8 Cluster: WRKY9; n=... 92 1e-17
gnl|LJGI|TC69589 homologue to UniRef100_A7LHH7 Cluster: WRKY39; ... 76 6e-13
gnl|LJGI|TC61070 similar to UniRef100_Q40090 Cluster: SPF1 prote... 72 1e-11
gnl|LJGI|GO009116 similar to UniRef100_A7LHJ0 Cluster: WRKY59; n... 60 4e-08
gnl|LJGI|FS348962 similar to UniRef100_A7LHH7 Cluster: WRKY39; n... 54 2e-06
gnl|LJGI|TC71912 similar to UniRef100_A7QQF6 Cluster: Chromosome... 54 2e-06
gnl|LJGI|TC64749 homologue to UniRef100_Q3LHK9 Cluster: Double W... 54 2e-06
gnl|LJGI|TC58889 similar to UniRef100_Q3LHK9 Cluster: Double WRK... 54 2e-06
gnl|LJGI|TC66253 similar to UniRef100_A7LHI9 Cluster: WRKY55; n=... 52 9e-06
>gnl|LJGI|TC63567 similar to UniRef100_A7PST7 Cluster: Chromosome chr8 scaffold_29,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_29, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 892
Score = 440 bits (222), Expect = e-122
Identities = 225/226 (99%)
Strand = Plus / Plus
Query: 1 atggatattcaagaatcagaaagggtggtggttgccaaaccagttgcttcaaggcctacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 atggatattcaagaatcagaaagggtggtggttgccaaaccagttgcttcaaggcctacc 121
Query: 61 tgttctagtttcaaatctttctcagagctcctagcaggagcaatcaatgactctccccct 120
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 tattctagtttcaaatctttctcagagctcctagcaggagcaatcaatgactctccccct 181
Query: 121 actgcatcttctcaagctactacagtttctgccattagaccaaagacagttaggttcaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 actgcatcttctcaagctactacagtttctgccattagaccaaagacagttaggttcaag 241
Query: 181 ccagcaatgaatcattgccccactcctgggtttatttcttctcagg 226
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 ccagcaatgaatcattgccccactcctgggtttatttcttctcagg 287
Score = 272 bits (137), Expect = 5e-72
Identities = 137/137 (100%)
Strand = Plus / Plus
Query: 222 tcagggtgacagttatggagctgcatttggtgattccgctgacaagagtcctaaacctga 281
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 tcagggtgacagttatggagctgcatttggtgattccgctgacaagagtcctaaacctga 427
Query: 282 caccaaccagtccctcatatacaagccaatggcaaaggttgtgtcaaagacaactgcttc 341
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 caccaaccagtccctcatatacaagccaatggcaaaggttgtgtcaaagacaactgcttc 487
Query: 342 tcttctgtcaaacatgg 358
|||||||||||||||||
Sbjct: 488 tcttctgtcaaacatgg 504
>gnl|LJGI|GO023813 similar to UniRef100_A7LHF8 Cluster: WRKY9; n=1; Glycine max|Rep:
WRKY9 - Glycine max (Soybean), partial (60%)
Length = 559
Score = 91.7 bits (46), Expect = 1e-17
Identities = 85/98 (86%)
Strand = Plus / Plus
Query: 595 aactggagaaaatatgggcagaaacaagttaaaggaagcgaattcccgcgaagttattat 654
|||||||||||||||||||||||||| || || || || || || || ||||| |||||
Sbjct: 68 aactggagaaaatatgggcagaaacatgtgaagggtagtgagtttcctcgaagctattac 127
Query: 655 aagtgcacgtatcctaattgtccagtgaagaagaaggt 692
||||||||| ||||||||||||| || |||||||||||
Sbjct: 128 aagtgcacgcatcctaattgtcctgtcaagaagaaggt 165
>gnl|LJGI|TC69589 homologue to UniRef100_A7LHH7 Cluster: WRKY39; n=1; Glycine max|Rep:
WRKY39 - Glycine max (Soybean), partial (62%)
Length = 1146
Score = 75.8 bits (38), Expect = 6e-13
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 1162 tggaggaaatatgggcagaaagtggtgaagggaaatccatatcccagaagttactata 1219
||||||||||||||||||||||| || |||||||||||| |||| || ||||||||||
Sbjct: 290 tggaggaaatatgggcagaaagttgtaaagggaaatccaaatccaaggagttactata 347
>gnl|LJGI|TC61070 similar to UniRef100_Q40090 Cluster: SPF1 protein; n=1; Ipomoea
batatas|Rep: SPF1 protein - Ipomoea batatas (Sweet
potato) (Batate), partial (41%)
Length = 1517
Score = 71.9 bits (36), Expect = 1e-11
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 1162 tggaggaaatatgggcagaaagtggtgaagggaaatccatatcccagaagttacta 1217
||||||||||||||||||||||| || |||||||||||| |||| || ||||||||
Sbjct: 1260 tggaggaaatatgggcagaaagtagtaaagggaaatccaaatccaaggagttacta 1315
>gnl|LJGI|GO009116 similar to UniRef100_A7LHJ0 Cluster: WRKY59; n=1; Glycine max|Rep:
WRKY59 - Glycine max (Soybean), partial (58%)
Length = 750
Score = 60.0 bits (30), Expect = 4e-08
Identities = 81/98 (82%)
Strand = Plus / Plus
Query: 592 tataactggagaaaatatgggcagaaacaagttaaaggaagcgaattcccgcgaagttat 651
|||||||||||||||||||| || || |||||||| || ||||| | ||| ||||||||
Sbjct: 318 tataactggagaaaatatggccaaaagcaagttaagggtagcgattacccacgaagttac 377
Query: 652 tataagtgcacgtatcctaattgtccagtgaagaagaa 689
|| ||||| || |||| ||||||| || ||||||||
Sbjct: 378 tacaagtgtacacatccgaattgtcaggttaagaagaa 415
>gnl|LJGI|FS348962 similar to UniRef100_A7LHH7 Cluster: WRKY39; n=1; Glycine max|Rep:
WRKY39 - Glycine max (Soybean), partial (21%)
Length = 662
Score = 54.0 bits (27), Expect = 2e-06
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 1289 tcactacctatgagggaaagcacaaccatga 1319
|||| ||||||||||||||||||||||||||
Sbjct: 592 tcacaacctatgagggaaagcacaaccatga 562
>gnl|LJGI|TC71912 similar to UniRef100_A7QQF6 Cluster: Chromosome undetermined
scaffold_142, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_142, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(31%)
Length = 991
Score = 54.0 bits (27), Expect = 2e-06
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 1289 tcactacctatgagggaaagcacaaccatga 1319
|||| ||||||||||||||||||||||||||
Sbjct: 349 tcacgacctatgagggaaagcacaaccatga 379
>gnl|LJGI|TC64749 homologue to UniRef100_Q3LHK9 Cluster: Double WRKY type
transfactor; n=1; Solanum tuberosum|Rep: Double WRKY
type transfactor - Solanum tuberosum (Potato), partial
(8%)
Length = 746
Score = 54.0 bits (27), Expect = 2e-06
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 598 tggagaaaatatgggcagaaacaagttaaaggaagcgaa 636
||||||||||||||||| |||||||| ||||| ||||||
Sbjct: 692 tggagaaaatatgggcaaaaacaagtaaaaggtagcgaa 730
>gnl|LJGI|TC58889 similar to UniRef100_Q3LHK9 Cluster: Double WRKY type transfactor;
n=1; Solanum tuberosum|Rep: Double WRKY type transfactor
- Solanum tuberosum (Potato), partial (15%)
Length = 762
Score = 54.0 bits (27), Expect = 2e-06
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 598 tggagaaaatatgggcagaaacaagttaaaggaagcgaa 636
||||||||||||||||| |||||||| ||||| ||||||
Sbjct: 594 tggagaaaatatgggcaaaaacaagtaaaaggtagcgaa 632
>gnl|LJGI|TC66253 similar to UniRef100_A7LHI9 Cluster: WRKY55; n=1; Glycine max|Rep:
WRKY55 - Glycine max (Soybean), partial (46%)
Length = 1794
Score = 52.0 bits (26), Expect = 9e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 584 atgatggttataactggagaaaatatgggcagaa 617
|||||||||||| ||||||||||||||| |||||
Sbjct: 688 atgatggttatagctggagaaaatatggacagaa 721