Miyakogusa Predicted Gene
- Lj1g3v4575210.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4575210.1 NODE_6849_length_948_cov_215.319626.path1.1
(814 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC66121 similar to UniRef100_A7PSX2 Cluster: Chromosome... 755 0.0
gnl|LJGI|TC77228 weakly similar to UniRef100_Q9SBM1 Cluster: Hyd... 492 e-138
gnl|LJGI|DC595363 similar to UniRef100_Q1A1A1 Cluster: Forkhead ... 101 7e-21
gnl|LJGI|TC76318 62 6e-09
>gnl|LJGI|TC66121 similar to UniRef100_A7PSX2 Cluster: Chromosome chr8 scaffold_29,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_29, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (33%)
Length = 878
Score = 755 bits (381), Expect = 0.0
Identities = 381/381 (100%)
Strand = Plus / Minus
Query: 1 atgattcttgggaacaagcctacggaacttgtcgaattgcttctcagcttcatctttctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atgattcttgggaacaagcctacggaacttgtcgaattgcttctcagcttcatctttctt 322
Query: 61 cctcaacagggtatatatgataccctgacacaggtaaggcctgaaatccctaggttcttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cctcaacagggtatatatgataccctgacacaggtaaggcctgaaatccctaggttcttc 262
Query: 121 cttgaccagctcctgataggccttcaatgccgcagagaaatccccctccatcactttgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttgaccagctcctgataggccttcaatgccgcagagaaatccccctccatcactttgat 202
Query: 181 ctgcgcactcaagagcctgaaatccctcacatcgttatccctcttctgcttcctgcaaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgcgcactcaagagcctgaaatccctcacatcgttatccctcttctgcttcctgcaaga 142
Query: 241 ctcggtggcttcctccaccctcttgagcagccccttcaactgctcgttggactccgaagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 ctcggtggcttcctccaccctcttgagcagccccttcaactgctcgttggactccgaagt 82
Query: 301 cgccatgacgaggccgtgaaacgcctcaactcgatacgggtccttcttgaggatatcctc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81 cgccatgacgaggccgtgaaacgcctcaactcgatacgggtccttcttgaggatatcctc 22
Query: 361 gaagattctcgtagcggaatc 381
|||||||||||||||||||||
Sbjct: 21 gaagattctcgtagcggaatc 1
>gnl|LJGI|TC77228 weakly similar to UniRef100_Q9SBM1 Cluster: Hydroxyproline-rich
glycoprotein DZ-HRGP precursor; n=1; Volvox carteri f.
nagariensis|Rep: Hydroxyproline-rich glycoprotein
DZ-HRGP precursor - Volvox carteri f. nagariensis,
partial (15%)
Length = 597
Score = 492 bits (248), Expect = e-138
Identities = 251/252 (99%)
Strand = Plus / Minus
Query: 472 aatagcctcgtcgatcttgcgagctctgatcttgagctccatgagtgcgcggagggcttc 531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 aatagcctcgtcgatcttgcgagctctgatcttgagctccatgagtgcgcggagggcttc 538
Query: 532 ggtgtcgttagggttggtggtgaggcggtcttcgatggcgcgctcagcttcttcttcgtc 591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 ggtgtcgttagggttggtggtgaggcggtcttcgatggcgcgctcagcttcttcttcgtc 478
Query: 592 ggcggcggtggtggtggtttcggattggatggttgtgggaggggtgaggggggcggcgat 651
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 ggcggcggtggtggtggtttcggattggatggttgtgggaggggtgaggggggcggcgat 418
Query: 652 gacggggttgtggtggaagcgcatgaagaagaaggcggtggcggcgatgacgatgcaggt 711
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 gacggggttgtggtggaagcgcatgaagaagaaggcggtggcggcgatgacgatgcaggt 358
Query: 712 ggtttcgacgac 723
||||| ||||||
Sbjct: 357 ggttttgacgac 346
Score = 101 bits (51), Expect = 7e-21
Identities = 51/51 (100%)
Strand = Plus / Minus
Query: 764 aagttgttggtgtcggtgtttgggggtttgtgaaaggcggggtcgtttgag 814
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 aagttgttggtgtcggtgtttgggggtttgtgaaaggcggggtcgtttgag 255
>gnl|LJGI|DC595363 similar to UniRef100_Q1A1A1 Cluster: Forkhead box protein G1; n=1;
Ceratotherium simum|Rep: Forkhead box protein G1 -
Ceratotherium simum (White rhinoceros) (Square-lipped
rhinoceros), partial (5%)
Length = 263
Score = 101 bits (51), Expect = 7e-21
Identities = 51/51 (100%)
Strand = Plus / Minus
Query: 764 aagttgttggtgtcggtgtttgggggtttgtgaaaggcggggtcgtttgag 814
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 aagttgttggtgtcggtgtttgggggtttgtgaaaggcggggtcgtttgag 193
>gnl|LJGI|TC76318
Length = 1314
Score = 61.9 bits (31), Expect = 6e-09
Identities = 79/95 (83%)
Strand = Plus / Minus
Query: 44 tcagcttcatctttcttcctcaacagggtatatatgataccctgacacaggtaaggcctg 103
|||||||||||||||||| | | ||| ||||| | | ||||||||||| |||||| ||
Sbjct: 849 tcagcttcatctttcttcttaagcagagtatacacaacaccctgacacaagtaaggtcta 790
Query: 104 aaatccctaggttcttccttgaccagctcctgata 138
|||||| | ||||| ||||| || |||||||||||
Sbjct: 789 aaatccttcggttcctccttcacaagctcctgata 755