Miyakogusa Predicted Gene
- Lj1g3v4552380.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4552380.1 tr|B9HBE4|B9HBE4_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_560728 PE=4
SV=1,43.75,5e-18,seg,NULL,CUFF.32639.1
(759 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC57805 weakly similar to UniRef100_Q9ZUR9 Cluster: Exp... 674 0.0
gnl|LJGI|TC61566 weakly similar to UniRef100_Q5M762 Cluster: At2... 436 e-122
gnl|LJGI|TC66522 weakly similar to UniRef100_Q0DLA2 Cluster: Os0... 295 2e-79
gnl|LJGI|TC72437 246 2e-64
gnl|LJGI|TC73456 similar to UniRef100_Q0DLA2 Cluster: Os05g01135... 70 2e-11
gnl|LJGI|TC70222 similar to UniRef100_A8QNN1 Cluster: 91A protei... 70 2e-11
>gnl|LJGI|TC57805 weakly similar to UniRef100_Q9ZUR9 Cluster: Expressed protein; n=1;
Arabidopsis thaliana|Rep: Expressed protein -
Arabidopsis thaliana (Mouse-ear cress), partial (74%)
Length = 842
Score = 674 bits (340), Expect = 0.0
Identities = 340/340 (100%)
Strand = Plus / Plus
Query: 1 atggacatgtgctctcgtgttcctgatgtgcacaacaacttgttaagtaatcttgagagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 atggacatgtgctctcgtgttcctgatgtgcacaacaacttgttaagtaatcttgagagt 562
Query: 61 acttctcatgagtcattgcatgttgatgatgccctgaaatctgaacttgcaactgagggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 acttctcatgagtcattgcatgttgatgatgccctgaaatctgaacttgcaactgagggg 622
Query: 121 aatggcgtctgcgatgttggtgaggaaaacttaagcggaggtgtcaaacagcaagaaaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 aatggcgtctgcgatgttggtgaggaaaacttaagcggaggtgtcaaacagcaagaaaca 682
Query: 181 aaactcaatatgatatgcttgacaaaatctgcaacctttccaattcctcatatgatgtct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 aaactcaatatgatatgcttgacaaaatctgcaacctttccaattcctcatatgatgtct 742
Query: 241 tcaagctcttctgatgaggaggctaactcatcagttgcaaagtccaactctgagcaatct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 tcaagctcttctgatgaggaggctaactcatcagttgcaaagtccaactctgagcaatct 802
Query: 301 gctagtcagacttactcacgctcggtatctcttcctgctc 340
||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 gctagtcagacttactcacgctcggtatctcttcctgctc 842
>gnl|LJGI|TC61566 weakly similar to UniRef100_Q5M762 Cluster: At2g37480; n=1;
Arabidopsis thaliana|Rep: At2g37480 - Arabidopsis
thaliana (Mouse-ear cress), partial (20%)
Length = 704
Score = 436 bits (220), Expect = e-122
Identities = 220/220 (100%)
Strand = Plus / Plus
Query: 540 ttcatcatctcatgggggcagtggcaaagacaagaagcaagctcgcaagcagggtggaca 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 ttcatcatctcatgggggcagtggcaaagacaagaagcaagctcgcaagcagggtggaca 252
Query: 600 ttctgacctctcttttgagtccctggattctcatgataatgtgactggaacttctgagtt 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 ttctgacctctcttttgagtccctggattctcatgataatgtgactggaacttctgagtt 312
Query: 660 agatgctcttgatgttcgaagccatgattcgttctgtggaactagtttcttgaaaaactc 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 agatgctcttgatgttcgaagccatgattcgttctgtggaactagtttcttgaaaaactc 372
Query: 720 tgttaccaaagtgcactcattggttgcagaagcgcaatga 759
||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 tgttaccaaagtgcactcattggttgcagaagcgcaatga 412
Score = 228 bits (115), Expect = 4e-59
Identities = 115/115 (100%)
Strand = Plus / Plus
Query: 348 catacctgccttgaaaggcagtcgtgagaaatacaggggatctccaatgaaattgacagt 407
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 catacctgccttgaaaggcagtcgtgagaaatacaggggatctccaatgaaattgacagt 60
Query: 408 gaaatgggcccctgatgtgtatgatcctgtacctacattaatgtcacacactgtc 462
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gaaatgggcccctgatgtgtatgatcctgtacctacattaatgtcacacactgtc 115
>gnl|LJGI|TC66522 weakly similar to UniRef100_Q0DLA2 Cluster: Os05g0113500 protein;
n=1; Oryza sativa Japonica Group|Rep: Os05g0113500
protein - Oryza sativa subsp. japonica (Rice), partial
(12%)
Length = 677
Score = 295 bits (149), Expect = 2e-79
Identities = 149/149 (100%)
Strand = Plus / Plus
Query: 314 actcacgctcggtatctcttcctgctcctgagctcatacctgccttgaaaggcagtcgtg 373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96 actcacgctcggtatctcttcctgctcctgagctcatacctgccttgaaaggcagtcgtg 155
Query: 374 agaaatacaggggatctccaatgaaattgacagtgaaatgggcccctgatgtgtatgatc 433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 agaaatacaggggatctccaatgaaattgacagtgaaatgggcccctgatgtgtatgatc 215
Query: 434 ctgtacctacattaatgtcacacactgtc 462
|||||||||||||||||||||||||||||
Sbjct: 216 ctgtacctacattaatgtcacacactgtc 244
Score = 254 bits (128), Expect = 7e-67
Identities = 131/132 (99%)
Strand = Plus / Plus
Query: 628 tctcatgataatgtgactggaacttctgagttagatgctcttgatgttcgaagccatgat 687
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 329 tctcatgataatgtgactggaacttctgagttagatgcacttgatgttcgaagccatgat 388
Query: 688 tcgttctgtggaactagtttcttgaaaaactctgttaccaaagtgcactcattggttgca 747
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 tcgttctgtggaactagtttcttgaaaaactctgttaccaaagtgcactcattggttgca 448
Query: 748 gaagcgcaatga 759
||||||||||||
Sbjct: 449 gaagcgcaatga 460
>gnl|LJGI|TC72437
Length = 703
Score = 246 bits (124), Expect = 2e-64
Identities = 144/148 (97%), Gaps = 2/148 (1%)
Strand = Plus / Plus
Query: 1 atggacatgtgctctcgtgttcctgatgtgcacaacaacttgttaagtaatcttgagagt 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 atggacatgtgctctcgtgctcctgatgtgcacaacaacttgttaagtaatcttgagagt 615
Query: 61 acttctcatgagtcattgcatgttgatgatgccctgaaatctgaacttgcaactgagggg 120
| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 616 atttctcatgagtcattgcatgttgatgatgccctgaaatctgaacttgc-actga-ggg 673
Query: 121 aatggcgtctgcgatgttggtgaggaaa 148
||||||||||||||||||||||||||||
Sbjct: 674 aatggcgtctgcgatgttggtgaggaaa 701
>gnl|LJGI|TC73456 similar to UniRef100_Q0DLA2 Cluster: Os05g0113500 protein; n=1;
Oryza sativa Japonica Group|Rep: Os05g0113500 protein -
Oryza sativa subsp. japonica (Rice), partial (13%)
Length = 1227
Score = 69.9 bits (35), Expect = 2e-11
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 396 gaaattgacagtgaaatgggcccctgatgtgtatgatcctgtacctacattaatgtcaca 455
||||||||| || |||||||| ||||||||||||||||| ||||| |||||| | |||||
Sbjct: 679 gaaattgactgttaaatgggctcctgatgtgtatgatccggtaccaacattagtatcaca 738
Query: 456 cactgtc 462
||||||
Sbjct: 739 tactgtc 745
>gnl|LJGI|TC70222 similar to UniRef100_A8QNN1 Cluster: 91A protein; n=4;
Triticum|Rep: 91A protein - Triticum aestivum (Wheat),
partial (10%)
Length = 609
Score = 69.9 bits (35), Expect = 2e-11
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 396 gaaattgacagtgaaatgggcccctgatgtgtatgatcctgtacctacattaatgtcaca 455
||||||||| || |||||||| ||||||||||||||||| ||||| |||||| | |||||
Sbjct: 14 gaaattgactgttaaatgggctcctgatgtgtatgatccggtaccaacattagtatcaca 73
Query: 456 cactgtc 462
||||||
Sbjct: 74 tactgtc 80