Miyakogusa Predicted Gene
- Lj1g3v4551350.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4551350.1 tr|Q6ZNE1|Q6ZNE1_HUMAN cDNA FLJ16186 fis, clone
BRTHA2007060, moderately similar to EUKARYOTIC TRANS,87.86,0,seg,NULL;
coiled-coil,NULL; PCI,Proteasome component (PCI) domain; SUBFAMILY NOT
NAMED,NULL; EUKARYO,CUFF.32634.1
(2883 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC63076 homologue to UniRef100_A7PRW8 Cluster: Chromoso... 1229 0.0
gnl|LJGI|FS329036 similar to UniRef100_A7PRW8 Cluster: Chromosom... 1124 0.0
gnl|LJGI|TC68451 similar to UniRef100_A7PRW8 Cluster: Chromosome... 777 0.0
gnl|LJGI|AV414017 similar to UniRef100_A7PRW8 Cluster: Chromosom... 573 e-162
>gnl|LJGI|TC63076 homologue to UniRef100_A7PRW8 Cluster: Chromosome chr14
scaffold_27, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_27, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (21%)
Length = 723
Score = 1229 bits (620), Expect = 0.0
Identities = 620/620 (100%)
Strand = Plus / Plus
Query: 1 atgacttcgtttttgaaacctgaaaacgccctgaaaagggcggaagagctgatcaatgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104 atgacttcgtttttgaaacctgaaaacgccctgaaaagggcggaagagctgatcaatgtg 163
Query: 61 gggcagaagcaggatgctttgcagaccctccatgatgttattacttcgaagagatatagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 164 gggcagaagcaggatgctttgcagaccctccatgatgttattacttcgaagagatatagg 223
Query: 121 gcttggcagaagacccttgagaggattatgttcaagtatgttgaactgtgcgtggagctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 gcttggcagaagacccttgagaggattatgttcaagtatgttgaactgtgcgtggagctg 283
Query: 181 cgcaaagggaggtttgcgaaggatgggcttatccaatatcgtatcatatgtcagcaagtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 cgcaaagggaggtttgcgaaggatgggcttatccaatatcgtatcatatgtcagcaagtg 343
Query: 241 aatgttagctcgctggaggaggttatcaaacatttcatgcacttgtcgactgagaaagct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 aatgttagctcgctggaggaggttatcaaacatttcatgcacttgtcgactgagaaagct 403
Query: 301 gaacaagcccgtagccaggcccaggcattggaagaagcgcttgatgttgatgatctggag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 gaacaagcccgtagccaggcccaggcattggaagaagcgcttgatgttgatgatctggag 463
Query: 361 gctgataagaggcctgaggacttgatgctaagctatgtcagtggtgagaaaggaaaggac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 gctgataagaggcctgaggacttgatgctaagctatgtcagtggtgagaaaggaaaggac 523
Query: 421 agatctgatcgggagcttgtcaccccttggtttaaatttctgtgggaaacttacaggaca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 agatctgatcgggagcttgtcaccccttggtttaaatttctgtgggaaacttacaggaca 583
Query: 481 gtgcttgaaatattacggaacaactcaaaattggaagccttgtatgctatgacagcccat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 gtgcttgaaatattacggaacaactcaaaattggaagccttgtatgctatgacagcccat 643
Query: 541 cgagctttccagttttgtaagcaatataaacgtacgacagaatttcgaagactttgtgaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 cgagctttccagttttgtaagcaatataaacgtacgacagaatttcgaagactttgtgaa 703
Query: 601 attataagaaaccatttggc 620
||||||||||||||||||||
Sbjct: 704 attataagaaaccatttggc 723
>gnl|LJGI|FS329036 similar to UniRef100_A7PRW8 Cluster: Chromosome chr14 scaffold_27,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_27, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (19%)
Length = 571
Score = 1124 bits (567), Expect = 0.0
Identities = 570/571 (99%)
Strand = Plus / Plus
Query: 917 gcttcaataagaatctgagtcagaaggatttgcaattgttagcttcatctgttgttctgg 976
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcttcaataagaatctgagtcagaaggatttgcaattgttagcttcatctgttgttctgg 60
Query: 977 ctgctctctcagtgcctcctcatgatcacactcatggtgcatctcatttggaactggagc 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctgctctctcagtgcctcctcatgatcacactcatggtgcatctcatttggaactggagc 120
Query: 1037 atgaaaaagagagaaatttgaggatgtctaatctcattggctttaatcttgaaaacaaac 1096
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 121 atgaaaaagagagaaatttgaggatgtctaatctcattggctttagtcttgaaaacaaac 180
Query: 1097 cggagagcagagaagtgctctcaagatcatcacttcttgctgaactggcttcgaagggtg 1156
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cggagagcagagaagtgctctcaagatcatcacttcttgctgaactggcttcgaagggtg 240
Query: 1157 tgatgtcatgtgtaacacaggaagtgaaggacattcactatcttttggagcatgaatttc 1216
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgatgtcatgtgtaacacaggaagtgaaggacattcactatcttttggagcatgaatttc 300
Query: 1217 tcccttcagatcttgcacagaaagtgctgcccttgttaactaaattctcaaaactaggtg 1276
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tcccttcagatcttgcacagaaagtgctgcccttgttaactaaattctcaaaactaggtg 360
Query: 1277 gtaagctttccactgcttcatccattccagaagtgcatttgtcacagtatgttccggcac 1336
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gtaagctttccactgcttcatccattccagaagtgcatttgtcacagtatgttccggcac 420
Query: 1337 tggaaaaactagcgaccttgaggttgctacagcaggtttctaatgtgtaccagactatga 1396
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tggaaaaactagcgaccttgaggttgctacagcaggtttctaatgtgtaccagactatga 480
Query: 1397 agattgagactttatctgggatgatccccttctttgaattttctgtggtggaaaagattt 1456
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 agattgagactttatctgggatgatccccttctttgaattttctgtggtggaaaagattt 540
Query: 1457 ctgtggatgctgttaagcagaagtttgtatc 1487
|||||||||||||||||||||||||||||||
Sbjct: 541 ctgtggatgctgttaagcagaagtttgtatc 571
>gnl|LJGI|TC68451 similar to UniRef100_A7PRW8 Cluster: Chromosome chr14 scaffold_27,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_27, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 806
Score = 777 bits (392), Expect = 0.0
Identities = 399/400 (99%), Gaps = 1/400 (0%)
Strand = Plus / Plus
Query: 2485 cgcttagcaaaattagctgagattagtgaaaaacagaggcagagagagcgggagcttgaa 2544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 cgcttagcaaaattagctgagattagtgaaaaacagaggcagagagagcgggagcttgaa 132
Query: 2545 gaaaaagagaggcagaggaaggaagcattgttgggca-gaccaaccgaaccagttcttaa 2603
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 133 gaaaaagagaggcagaggaaggaagcattgttgggcaagaccaaccgaaccagttcttaa 192
Query: 2604 gcccgctgagcctcctgctcgaccgttggaatctgcacctgctgcagcagctgccgttgc 2663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 gcccgctgagcctcctgctcgaccgttggaatctgcacctgctgcagcagctgccgttgc 252
Query: 2664 aaacccagggagatatgttcccagacaccgacgccaaggaggtgaacctgcagccgctgc 2723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 aaacccagggagatatgttcccagacaccgacgccaaggaggtgaacctgcagccgctgc 312
Query: 2724 cgctgctgctcctcctcctccggaaacagatcgttggaataacagtagcagccggccgga 2783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 cgctgctgctcctcctcctccggaaacagatcgttggaataacagtagcagccggccgga 372
Query: 2784 tggtgacaggtggcgcagtgaggatcgcagaacctcctttggttctggtgctccaaagtc 2843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 tggtgacaggtggcgcagtgaggatcgcagaacctcctttggttctggtgctccaaagtc 432
Query: 2844 atccaccacatggtcatcttccaggaatcgtgatcgttga 2883
||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 atccaccacatggtcatcttccaggaatcgtgatcgttga 472
>gnl|LJGI|AV414017 similar to UniRef100_A7PRW8 Cluster: Chromosome chr14 scaffold_27,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_27, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (13%)
Length = 434
Score = 573 bits (289), Expect = e-162
Identities = 289/289 (100%)
Strand = Plus / Plus
Query: 2003 ctgaacaactccgtgaaaggcaggaaatggaaaagaagctgcaaaaacttgctaaaacca 2062
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctgaacaactccgtgaaaggcaggaaatggaaaagaagctgcaaaaacttgctaaaacca 60
Query: 2063 tggatcatttggaaagagccaaaagagaagaagctgctccgcttattgaagctgcatatc 2122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tggatcatttggaaagagccaaaagagaagaagctgctccgcttattgaagctgcatatc 120
Query: 2123 aacagcgcctagtagaagagagggttcttcatgagcgtgagcaacaactagaggttgaag 2182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aacagcgcctagtagaagagagggttcttcatgagcgtgagcaacaactagaggttgaag 180
Query: 2183 taagcagacagcggcatgagggagatcttattgagaaggagaggctttctcgaatgatgg 2242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 taagcagacagcggcatgagggagatcttattgagaaggagaggctttctcgaatgatgg 240
Query: 2243 gcagtaaagagatatatcaagagagagttgtcaatcagcgccaagcaga 2291
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gcagtaaagagatatatcaagagagagttgtcaatcagcgccaagcaga 289
Score = 297 bits (150), Expect = 2e-79
Identities = 150/150 (100%)
Strand = Plus / Plus
Query: 2523 gcagagagagcgggagcttgaagaaaaagagaggcagaggaaggaagcattgttgggcag 2582
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 gcagagagagcgggagcttgaagaaaaagagaggcagaggaaggaagcattgttgggcag 344
Query: 2583 accaaccgaaccagttcttaagcccgctgagcctcctgctcgaccgttggaatctgcacc 2642
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 accaaccgaaccagttcttaagcccgctgagcctcctgctcgaccgttggaatctgcacc 404
Query: 2643 tgctgcagcagctgccgttgcaaacccagg 2672
||||||||||||||||||||||||||||||
Sbjct: 405 tgctgcagcagctgccgttgcaaacccagg 434