Miyakogusa Predicted Gene
- Lj1g3v4551290.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4551290.1 Non Chatacterized Hit- tr|B9GDT8|B9GDT8_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,64.71,2e-17,UNC-93,Ion channel regulatory protein, UNC-93;
UNC-93A-RELATED,NULL; UNC-93 RELATED,NULL; seg,NULL; ,CUFF.32640.1
(1275 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC78735 similar to UniRef100_A2Q192 Cluster: UNC93 homo... 1126 0.0
gnl|LJGI|TC69388 similar to UniRef100_A2Q192 Cluster: UNC93 homo... 860 0.0
gnl|LJGI|GO040428 similar to UniRef100_A2Q192 Cluster: UNC93 hom... 823 0.0
gnl|LJGI|TC78524 similar to UniRef100_Q94AA1 Cluster: UNC93-like... 781 0.0
gnl|LJGI|AV426609 similar to UniRef100_Q94AA1 Cluster: UNC93-lik... 476 e-133
gnl|LJGI|GO033793 similar to UniRef100_Q94AA1 Cluster: UNC93-lik... 436 e-121
gnl|LJGI|TC61018 weakly similar to UniRef100_Q9LW42 Cluster: Hel... 192 4e-48
>gnl|LJGI|TC78735 similar to UniRef100_A2Q192 Cluster: UNC93 homolog A , related; n=1;
Medicago truncatula|Rep: UNC93 homolog A , related -
Medicago truncatula (Barrel medic), partial (91%)
Length = 1345
Score = 1126 bits (568), Expect = 0.0
Identities = 932/1053 (88%), Gaps = 9/1053 (0%)
Strand = Plus / Plus
Query: 232 acaactggttacttattgtacctggctgcaaatttgaagcctaattggtatacacttgtg 291
||||||||||| || || ||| ||||||| ||||||||||| |||||||||||||||||
Sbjct: 5 acaactggttatttcttttacttggctgctaatttgaagcccaattggtatacacttgtt 64
Query: 292 ccgtcctctttgtttcttggattttgtgcttctataatatgggttggacagggaacatat 351
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 65 ccgtcctctttgtttcttggattttgtgcttctataatatgggttggacggggaacatat 124
Query: 352 ctcacttccactgcacgcagtcatgctaaagataacgacttgctcgaaggtgcagtaatt 411
|||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||||
Sbjct: 125 ctcacttccactgcacgcagtcatgctaaagataacaacttgcatgaaggtgctgtaatt 184
Query: 412 ggcgacttcaatggggaattctgggctgtgtatgctctccaccagtttattgggagtctt 471
||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 185 ggcaacttcaatggggaattttgggctgtgtatgctctccaccagtttattgggagtctt 244
Query: 472 atttcatttgctctactcagtggtgggaaggagggaagtaccaatggcggaactttgttg 531
|| |||||||||||||||||| ||||||||||||||| ||||||||| |||||| ||
Sbjct: 245 atcacatttgctctactcagtgatgggaaggagggaagaaccaatggcagaacttcatta 304
Query: 532 tttgttgtattcctttgtgttgtggcatttggcgcaatactaatgtgtttcttgcgtaaa 591
|||| ||| |||||| |||| || | ||||| ||||||||||| | |||||||| |||
Sbjct: 305 tttgccgtactcctttttgttatgacctttggtgcaatactaatattcttcttgcgcaaa 364
Query: 592 gggatcgagaata---gcaaaagagaatatgagcattcagg------ttctggtgctagt 642
||| ||| |||| | || || | | |||||||||||| | ||||||| ||
Sbjct: 365 cggagcgataataatagtaagggaaagtgtgagcattcaggagatggtggtggtgctggt 424
Query: 643 gaacattcgtcccttaagtctctatgtaggtcacttaccagtgcattatctgatgtaaag 702
|||||||||||||| |||||||| ||||||||||| || |||||||| | ||||||||||
Sbjct: 425 gaacattcgtccctcaagtctctttgtaggtcactcacaagtgcattgtttgatgtaaag 484
Query: 703 atgttgttgatcataccccttatggcatattcaggcctacaaaaagcatttgtatgggct 762
||||||||||||||||||||||| |||||||||| |||||| |||||||||| ||||||
Sbjct: 485 atgttgttgatcataccccttattacatattcaggtctacaacaagcatttgtctgggct 544
Query: 763 gaatttaccaaatatgttgtaactcctgtaattggtgtttctggtgtgggtagttcaatg 822
||||||||||| |||||||||||||||| ||||||||||||||||||||||||| | ||
Sbjct: 545 gaatttaccaagtatgttgtaactcctgcaattggtgtttctggtgtgggtagtatactg 604
Query: 823 gcagcatacggggcttttgatggaatttgttctctggctgctggtcgtctcacctctggt 882
|| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 605 gccgcatacggggcttttgatggaatttgttctcttgctgctggtcgtctcacctctggt 664
Query: 883 ctcaggtctattacagcaatagtttcttttggagcttttgttcaggcagttgtattaatc 942
||| ||||||| | |||||||| || |||||||||| ||| || ||||||||||||||
Sbjct: 665 ctcccgtctattgcggcaatagtatcctttggagcttgtgtccaatcagttgtattaatc 724
Query: 943 ttgcttttgctagatttcagcataactagcggcttactgggtaccctatatgtacacttt 1002
|||||| ||||| ||||||||||| ||| ||| || || ||||| |||||| ||| |||
Sbjct: 725 ttgcttctgctaaatttcagcatacctaccggattgcttggtactctatatttactgttt 784
Query: 1003 ttggctgctttattgggcatcggtgatggagttcttatgacgcagctcaatgctttgctt 1062
||||||||||| |||||||| ||| |||||||||| ||||| ||||||||||||||||||
Sbjct: 785 ttggctgctttgttgggcattggtaatggagttctcatgacacagctcaatgctttgctt 844
Query: 1063 ggactgctatttaagcatgacacggaaggggcttttgcacagctaaatatatggcagagc 1122
||| ||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||
Sbjct: 845 ggaatgctatttaagcatgacacggaaggtgcttttgcgcagctaaggatatggcagagc 904
Query: 1123 gctacaattgctatcatgttctttttgtccccccacgtctcgtttgaggcaatggttgtg 1182
|| ||||||||||| ||||||||||||||| ||||||| ||||||||||| | || |||
Sbjct: 905 gcaacaattgctattgtgttctttttgtccctccacgtcccgtttgaggcatttgtagtg 964
Query: 1183 attatgctggctttcctttgcttctcattctgcagctttctatggttagctctcaaggtg 1242
| |||||||||| ||||||||||||||| |||||||||| ||||||||||||||||||||
Sbjct: 965 actatgctggctctcctttgcttctcatactgcagctttttatggttagctctcaaggtg 1024
Query: 1243 gtgaagacatcattatcctccactagtgagtga 1275
| ||||||||||| | ||||||| ||||||||
Sbjct: 1025 gggaagacatcatcaccctccacctgtgagtga 1057
>gnl|LJGI|TC69388 similar to UniRef100_A2Q192 Cluster: UNC93 homolog A , related; n=1;
Medicago truncatula|Rep: UNC93 homolog A , related -
Medicago truncatula (Barrel medic), partial (42%)
Length = 589
Score = 860 bits (434), Expect = 0.0
Identities = 434/434 (100%)
Strand = Plus / Plus
Query: 842 atggaatttgttctctggctgctggtcgtctcacctctggtctcaggtctattacagcaa 901
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atggaatttgttctctggctgctggtcgtctcacctctggtctcaggtctattacagcaa 60
Query: 902 tagtttcttttggagcttttgttcaggcagttgtattaatcttgcttttgctagatttca 961
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tagtttcttttggagcttttgttcaggcagttgtattaatcttgcttttgctagatttca 120
Query: 962 gcataactagcggcttactgggtaccctatatgtacactttttggctgctttattgggca 1021
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gcataactagcggcttactgggtaccctatatgtacactttttggctgctttattgggca 180
Query: 1022 tcggtgatggagttcttatgacgcagctcaatgctttgcttggactgctatttaagcatg 1081
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tcggtgatggagttcttatgacgcagctcaatgctttgcttggactgctatttaagcatg 240
Query: 1082 acacggaaggggcttttgcacagctaaatatatggcagagcgctacaattgctatcatgt 1141
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 acacggaaggggcttttgcacagctaaatatatggcagagcgctacaattgctatcatgt 300
Query: 1142 tctttttgtccccccacgtctcgtttgaggcaatggttgtgattatgctggctttccttt 1201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tctttttgtccccccacgtctcgtttgaggcaatggttgtgattatgctggctttccttt 360
Query: 1202 gcttctcattctgcagctttctatggttagctctcaaggtggtgaagacatcattatcct 1261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gcttctcattctgcagctttctatggttagctctcaaggtggtgaagacatcattatcct 420
Query: 1262 ccactagtgagtga 1275
||||||||||||||
Sbjct: 421 ccactagtgagtga 434
>gnl|LJGI|GO040428 similar to UniRef100_A2Q192 Cluster: UNC93 homolog A , related; n=1;
Medicago truncatula|Rep: UNC93 homolog A , related -
Medicago truncatula (Barrel medic), partial (50%)
Length = 527
Score = 823 bits (415), Expect = 0.0
Identities = 499/527 (94%)
Strand = Plus / Minus
Query: 682 agtgcattatctgatgtaaagatgttgttgatcataccccttatggcatattcaggccta 741
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 527 agtgcattatctgatgtaaagatgttgttgatcataccctttatggcatattcaggccta 468
Query: 742 caaaaagcatttgtatgggctgaatttaccaaatatgttgtaactcctgtaattggtgtt 801
||| ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 467 caacaagcatttgtatgggctgagtttaccaaatatgttgtaactcccgtaattggtgtt 408
Query: 802 tctggtgtgggtagttcaatggcagcatacggggcttttgatggaatttgttctctggct 861
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||
Sbjct: 407 tctggtgtgggtagttcaatggcaacatacggggcttttgatggaatttgttctcttgct 348
Query: 862 gctggtcgtctcacctctggtctcaggtctattacagcaatagtttcttttggagctttt 921
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 347 gctggtcgtctcacctctggtctcacgtctattacagcaatagtttcttttggagctttt 288
Query: 922 gttcaggcagttgtattaatcttgcttttgctagatttcagcataactagcggcttactg 981
|||||||||||||||| |||||||||||||||||||||||||||| |||||| || ||
Sbjct: 287 attcaggcagttgtattcatcttgcttttgctagatttcagcataagtagcggattcctt 228
Query: 982 ggtaccctatatgtacactttttggctgctttattgggcatcggtgatggagttcttatg 1041
| || |||||| ||| ||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 227 agcactctatatatactcttcttggctgctttattgggcattggtgatggagttcttatg 168
Query: 1042 acgcagctcaatgctttgcttggactgctatttaagcatgacacggaaggggcttttgca 1101
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 167 acgcagctcaatgctttgcttggaatgctatttaagcatgacacggaaggggcttttgca 108
Query: 1102 cagctaaatatatggcagagcgctacaattgctatcatgttctttttgtccccccacgtc 1161
|||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| |
Sbjct: 107 cagctaaagatatggcagagtgctacaattgctatcatgttctttttgtccccccacata 48
Query: 1162 tcgtttgaggcaatggttgtgattatgctggctttcctttgcttctc 1208
|||||||||| |||||| |||||||| ||||||||||||||||||||
Sbjct: 47 tcgtttgaggtaatggtggtgattattctggctttcctttgcttctc 1
>gnl|LJGI|TC78524 similar to UniRef100_Q94AA1 Cluster: UNC93-like protein; n=1;
Arabidopsis thaliana|Rep: UNC93-like protein -
Arabidopsis thaliana (Mouse-ear cress), partial (27%)
Length = 406
Score = 781 bits (394), Expect = 0.0
Identities = 404/406 (99%), Gaps = 1/406 (0%)
Strand = Plus / Plus
Query: 29 aggacattcatatcttgagcttggcttttctcttaatcttccttgcttatggagctgctc 88
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 aggacattcatatct-gagcttggcttttctcttaatcttccttgcttatggagctgctc 60
Query: 89 aaaatttacagagcactctcaacacagagcaggatttgggtaccacttcacttgggatat 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaaatttacagagcactctcaacacagagcaggatttgggtaccacttcacttgggatat 120
Query: 149 tgtatctgtctttcaccattttttctgtgtttgcttctttggtggtgaggaatctcggct 208
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 121 tgtatctgtctttcaccattttttctgtgtttgcttctttggtggtgacgaatctcggct 180
Query: 209 ccaaaaactctttgattattgggacaactggttacttattgtacctggctgcaaatttga 268
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ccaaaaactctttgattattgggacaactggttacttattgtacctggctgcaaatttga 240
Query: 269 agcctaattggtatacacttgtgccgtcctctttgtttcttggattttgtgcttctataa 328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agcctaattggtatacacttgtgccgtcctctttgtttcttggattttgtgcttctataa 300
Query: 329 tatgggttggacagggaacatatctcacttccactgcacgcagtcatgctaaagataacg 388
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tatgggttggacagggaacatatctcacttccactgcacgcagtcatgctaaagataacg 360
Query: 389 acttgctcgaaggtgcagtaattggcgacttcaatggggaattctg 434
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 acttgctcgaaggtgcagtaattggcgacttcaatggggaattctg 406
>gnl|LJGI|AV426609 similar to UniRef100_Q94AA1 Cluster: UNC93-like protein; n=1;
Arabidopsis thaliana|Rep: UNC93-like protein -
Arabidopsis thaliana (Mouse-ear cress), partial (22%)
Length = 424
Score = 476 bits (240), Expect = e-133
Identities = 288/304 (94%)
Strand = Plus / Plus
Query: 30 ggacattcatatcttgagcttggcttttctcttaatcttccttgcttatggagctgctca 89
|||| ||||||||||||| ||| | |||||||||||||||||||||||||||||||||||
Sbjct: 121 ggacgttcatatcttgagtttgtcctttctcttaatcttccttgcttatggagctgctca 180
Query: 90 aaatttacagagcactctcaacacagagcaggatttgggtaccacttcacttgggatatt 149
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gaatttacagagcactctcaacacagagcaggatttgggtaccacttcacttgggatatt 240
Query: 150 gtatctgtctttcaccattttttctgtgtttgcttctttggtggtgaggaatctcggctc 209
|||||| ||||||||||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 241 gtatctatctttcaccattttttctgtgtttgcttcttcggtggtgcggaatctcggctc 300
Query: 210 caaaaactctttgattattgggacaactggttacttattgtacctggctgcaaatttgaa 269
||||||||||||||||||||| ||||||||||| || || ||| ||||||| ||||||||
Sbjct: 301 caaaaactctttgattattggcacaactggttatttcttttacttggctgctaatttgaa 360
Query: 270 gcctaattggtatacacttgtgccgtcctctttgtttcttggattttgtgcttctataat 329
||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gcccaattggtatacacttgttccgtcctctttgtttcttggattttgtgcttctataat 420
Query: 330 atgg 333
||||
Sbjct: 421 atgg 424
>gnl|LJGI|GO033793 similar to UniRef100_Q94AA1 Cluster: UNC93-like protein; n=1;
Arabidopsis thaliana|Rep: UNC93-like protein -
Arabidopsis thaliana (Mouse-ear cress), partial (26%)
Length = 363
Score = 436 bits (220), Expect = e-121
Identities = 325/360 (90%)
Strand = Plus / Plus
Query: 134 cttcacttgggatattgtatctgtctttcaccattttttctgtgtttgcttctttggtgg 193
||||||||||||||||||||||||||||||| |||| || ||| |||||||||||||||
Sbjct: 1 cttcacttgggatattgtatctgtctttcacgtttttctcagtggttgcttctttggtgg 60
Query: 194 tgaggaatctcggctccaaaaactctttgattattgggacaactggttacttattgtacc 253
|| |||| ||||| |||||||||||||||||||||||||| |||||||| |||||||
Sbjct: 61 tgcggaaactcggttccaaaaactctttgattattgggactactggttatatattgtatg 120
Query: 254 tggctgcaaatttgaagcctaattggtatacacttgtgccgtcctctttgtttcttggat 313
||||||||||||||||||| |||||||||||||| || ||| ||||||||| |||||| |
Sbjct: 121 tggctgcaaatttgaagcccaattggtatacactggttccggcctctttgtatcttgggt 180
Query: 314 tttgtgcttctataatatgggttggacagggaacatatctcacttccactgcacgcagtc 373
|||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||
Sbjct: 181 tttgtgcttctataatatgggttggagagggaacatatctcacttccaccgcacgcagtc 240
Query: 374 atgctaaagataacgacttgctcgaaggtgcagtaattggcgacttcaatggggaattct 433
|||||| |||||| | |||| ||||||||||||||||| ||||| |||||||||||||
Sbjct: 241 atgctactgataacaaattgcatgaaggtgcagtaattggtgactttaatggggaattct 300
Query: 434 gggctgtgtatgctctccaccagtttattgggagtcttatttcatttgctctactcagtg 493
|||||||| ||| ||||||||||||||||||| ||||||| ||||||||||||| ||||
Sbjct: 301 gggctgtgcttgccctccaccagtttattgggaatcttattacatttgctctactgagtg 360
>gnl|LJGI|TC61018 weakly similar to UniRef100_Q9LW42 Cluster: Helicase-like protein;
n=1; Arabidopsis thaliana|Rep: Helicase-like protein -
Arabidopsis thaliana (Mouse-ear cress), partial (5%)
Length = 913
Score = 192 bits (97), Expect = 4e-48
Identities = 145/161 (90%)
Strand = Plus / Plus
Query: 341 agggaacatatctcacttccactgcacgcagtcatgctaaagataacgacttgctcgaag 400
|||||| ||||||||||||||||||||| |||||||||| ||||||| | ||| ||||
Sbjct: 365 agggaatatatctcacttccactgcacggagtcatgctacagataacaagttggatgaag 424
Query: 401 gtgcagtaattggcgacttcaatggggaattctgggctgtgtatgctctccaccagttta 460
||||||||||||| |||||||||||||||||||||||||||| ||| |||||||||||||
Sbjct: 425 gtgcagtaattggtgacttcaatggggaattctgggctgtgtttgccctccaccagttta 484
Query: 461 ttgggagtcttatttcatttgctctactcagtggtgggaag 501
|||| | ||||||| ||||||||||||||| || |||||||
Sbjct: 485 ttggaaatcttattacatttgctctactcaatgatgggaag 525